mRNA_P-littoralis_Contig200.85.3 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig200.85.3 vs. uniprot
Match: D7FPF8_ECTSI (DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF8_ECTSI) HSP 1 Score: 674 bits (1740), Expect = 3.820e-238 Identity = 328/361 (90.86%), Postives = 345/361 (95.57%), Query Frame = 2
Query: 110 MLGRVTKYRVNNDAPSEVFEADSEQERKDRLLLSYPERVGKNLDVKAVQPGSGDKNELVFDLVGIDASIANALRRILLAEVATVAIEHVYMYMNSSIIHDEILAHRLGLVPIMANPRMFEFVGETGGEPDDPTEFNTCVFKLEVKNPSDPADMPDPMPKGTSYAAGPRRTMNVFSGAMEWCPHGDQEERFEGEGGVRPVHDDILIAKLRPGQEIVAEMHCRKGIGKDHAKFSPVATASYRLLPVITLEEEIEGRDAEDLVAKCPLDVFDIEDLGGGSKRAKVARPRDCTMCRECIREPGWSEKISLSRIADHFIFGVESVGMLPPKELLKDSIQVLRQKCVSMIAEVEAFESGVDFDEAMP 1192
MLGRVTKYRV NDAPSEVFEA SEQERKDRLLLSY ERV K LDVKAVQ G G NELVFDLVG+DASIANALRRILLAEVATVAIEHVYM+MNSSIIHDEILAHRLGL+PIMANPRMFEFVGE GGE D+PTEFNTCVFKLEVKNP+DPADMPDPMP GTSYAAGPRRTMNVFSGAMEWCPHGDQ ERFEGEGG+RPVHDDILIAKLRPGQEIVAEMHCRKGIGKDHAKFSPVATASYRLLPV+TL+EE+EG++AE+LVAKCPL+VFDIEDLGG KRAKVARPRDCTMCRECIREPGWS+K+SLSR+ADHFIFG+ESVGMLPPKELLKDSIQVLRQKC SMIAEVEAFESGVDFDEAMP
Sbjct: 1 MLGRVTKYRVKNDAPSEVFEAASEQERKDRLLLSYAERVEKTLDVKAVQSGGGHTNELVFDLVGVDASIANALRRILLAEVATVAIEHVYMFMNSSIIHDEILAHRLGLIPIMANPRMFEFVGEEGGEQDEPTEFNTCVFKLEVKNPADPADMPDPMPTGTSYAAGPRRTMNVFSGAMEWCPHGDQVERFEGEGGLRPVHDDILIAKLRPGQEIVAEMHCRKGIGKDHAKFSPVATASYRLLPVVTLKEEVEGQEAEELVAKCPLNVFDIEDLGGAGKRAKVARPRDCTMCRECIREPGWSDKVSLSRVADHFIFGIESVGMLPPKELLKDSIQVLRQKCDSMIAEVEAFESGVDFDEAMP 361
BLAST of mRNA_P-littoralis_Contig200.85.3 vs. uniprot
Match: A0A6H5JLW5_9PHAE (DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLW5_9PHAE) HSP 1 Score: 577 bits (1486), Expect = 1.300e-199 Identity = 290/363 (79.89%), Postives = 313/363 (86.23%), Query Frame = 2
Query: 110 MLGRVTKYRVNNDAPSEVFEADSEQERKDRLLLSYPERVGKNLDVKAVQPGSGDKNELVFDLVGIDASIANALRRILLAEVATVAIEHVYMYMNSSIIHDEILAHRLGLVPIMANPRMFEFVGETGGEPDDPTEFNTCV-FKLEVKNPSDPADMPDPMPKGTSYAAGPRRTMNVFS-GAMEWCPHGDQEERFEGEGGVRPVHDDILIAKLRPGQEIVAEMHCRKGIGKDHAKFSPVATASYRLLPVITLEEEIEGRDAEDLVAKCPLDVFDIEDLGGGSKRAKVARPRDCTMCRECIREPGWSEKISLSRIADHFIFGVESVGMLPPKELLKDSIQVLRQKCVSMIAEVEAFESGVDFDEAMP 1192
MLGRVTKYRV NDAPSEVFEA SEQERKDRLLLSY ERV K LDVKAV+ G G KNELVFDLVG+DASIANALRRILLAEVATVAIEHVYM+MNSSIIHDEILAHRLGL+PIMANPRMFEFVG+ GGE D+ T+ V + + P P P G G GAMEWCPHGDQ ERFEGEGG+RPVHDDILIAKLRPGQEIVAEMHCRKGIGKDHAKFSPVATASYRLLPV+TL++E+EG++AE+LVAKCPL+VFDIEDLGG KRAKVARPRDCTMCRECIREPGWS+K+SLSR+ADHFIFG+ESVGMLPPKELLKDSIQVLRQKC SMIAEVEAFESG+DFDEAMP
Sbjct: 1 MLGRVTKYRVKNDAPSEVFEAASEQERKDRLLLSYAERVEKTLDVKAVRSGGGHKNELVFDLVGVDASIANALRRILLAEVATVAIEHVYMFMNSSIIHDEILAHRLGLIPIMANPRMFEFVGDEGGEQDEATDGVQHVRVQAGGEKPGGPGGHAGPYADGYELCGGAATDHERLQVGAMEWCPHGDQVERFEGEGGLRPVHDDILIAKLRPGQEIVAEMHCRKGIGKDHAKFSPVATASYRLLPVVTLKQEVEGQEAEELVAKCPLNVFDIEDLGGAGKRAKVARPRDCTMCRECIREPGWSDKVSLSRVADHFIFGIESVGMLPPKELLKDSIQVLRQKCDSMIAEVEAFESGIDFDEAMP 363
BLAST of mRNA_P-littoralis_Contig200.85.3 vs. uniprot
Match: A0A7S2UWR1_9STRA (DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWR1_9STRA) HSP 1 Score: 341 bits (875), Expect = 4.250e-107 Identity = 189/386 (48.96%), Postives = 245/386 (63.47%), Query Frame = 2
Query: 113 LGRVTKYRVNNDAPSEVFEADSEQERKDRLLLSYPERVGKNLDVKAVQPGSGDKNELVFDLVGIDASIANALRRILLAEVATVAIEHVYMYMNSSIIHDEILAHRLGLVPIMANPRMFEFV---------GETGGE--PDDPTEFNTCVFKLEVK--------------------NPSDPADMP---DPMPKGTSYAAGPRR--TMNVFSGAMEWCPHGDQEERFEGEGGVRPVHDDILIAKLRPGQEIVAEMHCRKGIGKDHAKFSPVATASYRLLPVITLEEEIEGRDAEDLVAKCPLDVFDIEDLGGGSKRAKVARPRDCTMCRECIREPGWSEKISLSRIADHFIFGVESVGMLPPKELLKDSIQVLRQKCVSMIAEVEAFE 1162
L V+ Y + DAP E F K Y E V K L ++ + D +L+FD+ GID SIANALRRILLAEV ++AIEHVY++ NSSI+HDE+LAHRLGLVPI+A P FE+ G+ GGE DDPT+ NT VFKL+VK N ++ D+ D +G +R TM V+SG ++W P G QEER G+ + V DDI++AKLRPGQ+IV E HCRKG+GKDHAK+SPVATA YR+LP IT +++ G DAE L KCP+ VFDIEDL GG +RA +RPRDCTMCRECIR P +KISL R+ADHFIF VE+VG+ P+++ K++I++L+ K + I E+E +
Sbjct: 28 LMAVSSYHLKTDAPHESFSV------KPNKTTDYVESVAKKLHIEIQKL---DDEQLIFDISGIDVSIANALRRILLAEVPSMAIEHVYVWANSSILHDEVLAHRLGLVPILAPPEEFEWFTRRKGGAEDGDEGGEGEEDDPTDLNTLVFKLDVKYNRHAAVKQQRRQKRLGPRANGAEEMDVDSTSDGEEEGPVEGGQRKRPPTMTVYSGDLQWEPQGGQEERLAGKE-PKAVVDDIILAKLRPGQQIVLEAHCRKGVGKDHAKYSPVATAFYRMLPRITFSQDVTGEDAEVLEKKCPMKVFDIEDLAGGGRRAVASRPRDCTMCRECIRTPPGDQKISLERVADHFIFSVETVGVTKPEKIFKEAIKMLKTKSLDFIEEIEQLQ 403
BLAST of mRNA_P-littoralis_Contig200.85.3 vs. uniprot
Match: A0A7S2RJI0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJI0_9STRA) HSP 1 Score: 337 bits (865), Expect = 2.730e-106 Identity = 182/364 (50.00%), Postives = 243/364 (66.76%), Query Frame = 2
Query: 98 GGGEMLGRVTKYRVNNDAPSEVFE-----ADSEQER--KDRLLLSYPERVGKNLDVKAVQPGSGDKNELVFDLVGIDASIANALRRILLAEVATVAIEHVYMYMNSSIIHDEILAHRLGLVPIMANPRMFEFVGETGGEPDDPTEFNTCVFKLEVKNPSDPADMPDPMPKGTSYAAGPRRTMNVFSGAMEWCPHGDQEERFEGEGGVRPVHDDILIAKLRPGQEIVAEMHCRKGIGKDHAKFSPVATASYRLLPVITLEEEIEGRDAEDLVAKCPLDVFDIEDLGGGSKRAKVARPRDCTMCRECIREPGWSEKISLSRIADHFIFGVESVGMLPPKELLKDSIQVLRQKCVSMIAEVEAFESG 1168
G E + +Y+V N SE F+ AD+ R DRLL G ++V + ELVFDL+G+DAS+ANALRRI+LAEV T+AIE+VY+ MNS +IHDE+LAHRLGLVPI +PR+F+ D+ NT VF L+V+ + D P G++ TM+V+S ++W P DQ E F G+RPVH+DIL+AKLRPGQ I E HC++G+GKDHAKFSPVATASYRLLP I + +E++G AE L A CP++VFDIEDLGG +RA ARPRDCTMCRECIR+ GW E++ L R ADH+IF VE+VGML P++++K++I++LR+KC + E++ +G
Sbjct: 1 GTMERSESIRRYQVKNQGVSEEFQPVSAAADASVHRPFSDRLL------EGMRIEVM-----ESSEEELVFDLIGVDASVANALRRIMLAEVPTMAIEYVYIEMNSGMIHDEVLAHRLGLVPIQVDPRLFK----DKVPQDEINSKNTVVFGLDVQC----SRSADTRPPGSTEPY----TMSVYSKHLQWLPQADQAEEFPD--GIRPVHEDILLAKLRPGQHIKLEAHCQRGVGKDHAKFSPVATASYRLLPDIVVADEVKGETAEQLKAMCPMNVFDIEDLGG-ERRATAARPRDCTMCRECIRQEGWDERVKLYRAADHYIFKVEAVGMLAPRDIVKEAIRILREKCTDFLGELQGDPAG 338
BLAST of mRNA_P-littoralis_Contig200.85.3 vs. uniprot
Match: A0A024TZC9_9STRA (DNA-directed RNA polymerases I and III subunit RPAC1 n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024TZC9_9STRA) HSP 1 Score: 332 bits (850), Expect = 2.240e-104 Identity = 188/357 (52.66%), Postives = 240/357 (67.23%), Query Frame = 2
Query: 137 VNNDAPSEVFEADSEQERKDRLLLSYPERVGKNLDVKAVQPGSGDKNELVFDLVGIDASIANALRRILLAEVATVAIEHVYMYMNSSIIHDEILAHRLGLVPIMANPRMFEFVGETGGEPDDPTEFNTCVFKLEVKNPSDPADMPDPMPKGTSYAAGPRRTMNVFSGAMEWCPHGDQEERFEGEGGVRPVHDDILIAKLRPGQEIVAEMHCRKGIGKDHAKFSPVATASYRLLPVITLEEEIEGRDAEDLVAKCPLDVFDIEDLGGGSKRAKVARPRDCTMCRECIREPGWSEKISLSRIADHFIFGVESVGMLPPKELLKDSIQVLRQKCVSMIAEVEAFESGV------DFDEAM 1189
V DAP V + +SE ++ + K L VK +Q + D E+VFDL+GIDASIANA RRILLAEV T+AIEHVY++ NSSII DE+LAHRLGL+P+ +PR F+ E E + T+ NT VFKL+V +DP+D P+ + K T+ + V+S +EW P G QEERF G +RPV +DILIAKLRPGQ I E HCRKG+GKDHAKFSPVATASYRLLP IT + G DA+ L CP++VFDIEDL A ARPR+CTMCRECIR PGWS+K+ + R++DHFIF VE+VGMLPP++LL ++I+VL KC + + A + + D D+AM
Sbjct: 8 VGLDAPH-VPDTESESSH------AFVDNFKKQLKVK-IQSLTDD--EIVFDLIGIDASIANAFRRILLAEVPTMAIEHVYLWNNSSIIQDEVLAHRLGLIPLQVDPREFQSFPEH--EEGEATDENTLVFKLDVTCTADPSD-PNDISKATNAS--------VYSRHLEWVPQGLQEERF---GSIRPVSEDILIAKLRPGQTIALEAHCRKGVGKDHAKFSPVATASYRLLPEITFPAPVVGADAKTLQKTCPMNVFDIEDLA-----AVAARPRNCTMCRECIRAPGWSDKVKMGRVSDHFIFSVETVGMLPPEDLLPEAIKVLVAKCDVAVESLNAVDDELRENADEDEDDAM 335
BLAST of mRNA_P-littoralis_Contig200.85.3 vs. uniprot
Match: A0A6G0XIR3_9STRA (DNA-directed RNA polymerases I and III subunit RPAC1 n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XIR3_9STRA) HSP 1 Score: 330 bits (847), Expect = 4.950e-104 Identity = 170/306 (55.56%), Postives = 217/306 (70.92%), Query Frame = 2
Query: 272 KNELVFDLVGIDASIANALRRILLAEVATVAIEHVYMYMNSSIIHDEILAHRLGLVPIMANPRMFEFVGETGGEPDDPTEFNTCVFKLEVKNPSDPADMPDPMPKGTSYAAGPRRTMNVFSGAMEWCPHGDQEERFEGEGGVRPVHDDILIAKLRPGQEIVAEMHCRKGIGKDHAKFSPVATASYRLLPVITLEEEIEGRDAEDLVAKCPLDVFDIEDLGGGSKRAKVARPRDCTMCRECIREPGWSEKISLSRIADHFIFGVESVGMLPPKELLKDSIQVLRQKCVSMIAEVEAFESGVDFDEAM 1189
+ ++VFD++GIDASIANA RRILLAEV T+AIEHVY++ NSSII DE+LAHRLGL+P+ +PR F+ E E + T+ NT VFKL+V +DP D PD + K T+ + ++S +EW P G QEERF G +RPV +DILIAKLRPGQ I E HCRKG+GKDHAKFSPVATASYRLLP I + G DA+ L CP++VFDIED+ A ARPR+CTMCRECIR PGWS+K+ L R++DHFIF VE+VGMLPP++LL ++++VL KC + + A + + DE M
Sbjct: 43 EEDIVFDVIGIDASIANAFRRILLAEVPTMAIEHVYLWNNSSIIQDEVLAHRLGLIPLQVDPREFQSFPEL--EEGEATDENTLVFKLDVTCTADPDD-PDDISKATNSS--------IYSRHLEWVPQGLQEERF---GSIRPVSEDILIAKLRPGQTIALEAHCRKGVGKDHAKFSPVATASYRLLPDIQFPAPVTGADAKTLQKTCPMNVFDIEDMA-----AVAARPRNCTMCRECIRAPGWSDKVELGRVSDHFIFSVETVGMLPPEDLLPEALKVLMTKCDVAVESLNAMDDELAEDETM 329
BLAST of mRNA_P-littoralis_Contig200.85.3 vs. uniprot
Match: A0A1V9ZSM6_9STRA (DNA-directed RNA polymerases I and III subunit RPAC1 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9ZSM6_9STRA) HSP 1 Score: 328 bits (841), Expect = 5.030e-103 Identity = 185/352 (52.56%), Postives = 232/352 (65.91%), Query Frame = 2
Query: 134 RVNNDAPSEVFEADSEQERKDRLLLSYPERVGKNLDVKAVQPGSGDKNELVFDLVGIDASIANALRRILLAEVATVAIEHVYMYMNSSIIHDEILAHRLGLVPIMANPRMFEFVGETGGEPDDPTEFNTCVFKLEVKNPSDPADMPDPMPKGTSYAAGPRRTMNVFSGAMEWCPHGDQEERFEGEGGVRPVHDDILIAKLRPGQEIVAEMHCRKGIGKDHAKFSPVATASYRLLPVITLEEEIEGRDAEDLVAKCPLDVFDIEDLGGGSKRAKVARPRDCTMCRECIREPGWSEKISLSRIADHFIFGVESVGMLPPKELLKDSIQVLRQKCVSMIAEVEAFESGVDFDEAM 1189
R+ DAP D+E E +R L S+ KN +K Q D +VFD +GIDASIANA RRILLAEV T+AIEHVY++ NSSII DE+LAHRLGL+P+ +PR F+ E E + T+ NT VFKL+V +D D P+ + K T+ + V+S +EW P G QEERF G +RPV +DILIAKLRPGQ I E HCRKG+GKDHAKFSPVATASYRLLP I I+G+DA+ L CP++VFDIED A VARPRDCTMCRECIR PGW EK+ L R++DHFIF VE+VGML P+ELL ++++VL KC + + + + + D M
Sbjct: 7 RIGTDAP---HMPDTECEATERFLESFK----KNFKIKIQQLTDED---IVFDAIGIDASIANAFRRILLAEVPTMAIEHVYIWNNSSIIQDEVLAHRLGLIPLQVDPRDFQSFPEH--EEAEATDENTLVFKLDVVCEADKDD-PEDISKATNAS--------VYSRHLEWIPQGMQEERF---GNIRPVSEDILIAKLRPGQCIALEAHCRKGVGKDHAKFSPVATASYRLLPDIQFPAPIKGQDAKTLQKTCPMNVFDIED-----SHAVVARPRDCTMCRECIRAPGWDEKVKLGRVSDHFIFSVETVGMLKPEELLPEALKVLMSKCDVALESLNSIDDELTNDVDM 329
BLAST of mRNA_P-littoralis_Contig200.85.3 vs. uniprot
Match: A0A5D6XHD4_9STRA (DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XHD4_9STRA) HSP 1 Score: 328 bits (841), Expect = 7.240e-103 Identity = 183/307 (59.61%), Postives = 217/307 (70.68%), Query Frame = 2
Query: 212 YPERVGKNLDVKAVQPGSGDKNELVFDLVGIDASIANALRRILLAEVATVAIEHVYMYMNSSIIHDEILAHRLGLVPIMANPRMFEFVGETGGEPDDPTEFNTCVFKLEVKNPSDPADMPDPMPKGTSYAAGPRRTMNVFSGAMEWCPHGDQEERFEGEGGVRPVHDDILIAKLRPGQEIVAEMHCRKGIGKDHAKFSPVATASYRLLPVITLEEEIEGRDAEDLVA-KCPLDVFDIEDLGGGSKRAKVARPRDCTMCRECIREPGWSEKISLSRIADHFIFGVESVGMLPPKELLKDSIQVLRQKC 1129
Y E++ K + VK +Q S + E+VFDL+G+DASIANALRRILLAEV T+AIEHVY++ NSSII DE+LAHRLGLVP+ +PR EF E + T+ NT VFKL+V DPA D AA T +V+S +EW P G+QEERF G +RPVH+DILIAKLRPGQ I E HCRKG+GKDHAKFSPVATASYRL+P I L + + G DA LVA KC L VFDIEDLGG A V R C MCRECIREPGW EKI L R++DHFIF VESVGM+ P+ELL +++ VL KC
Sbjct: 30 YVEQLKKQVKVK-IQ--SLSEEEIVFDLIGVDASIANALRRILLAEVPTMAIEHVYIWNNSSIIQDEVLAHRLGLVPLNVDPR--EFQAFPDNEEAEATDENTIVFKLDVTCRFDPAHPQD--------AAKALHT-SVYSRDLEWVPQGNQEERF---GAIRPVHEDILIAKLRPGQSIALEAHCRKGVGKDHAKFSPVATASYRLMPHIELAQPVTGADARQLVADKCALGVFDIEDLGGVDT-AVVKDARSCNMCRECIREPGWDEKIKLGRVSDHFIFSVESVGMIKPEELLPEALNVLVDKC 318
BLAST of mRNA_P-littoralis_Contig200.85.3 vs. uniprot
Match: A0A662X4Y9_9STRA (DNA-directed RNA polymerases I and III subunit RPAC1 n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X4Y9_9STRA) HSP 1 Score: 326 bits (836), Expect = 4.140e-102 Identity = 184/332 (55.42%), Postives = 227/332 (68.37%), Query Frame = 2
Query: 134 RVNNDAPSEVFEADSEQERKDRLLLSYPERVGKNLDVKAVQPGSGDKNELVFDLVGIDASIANALRRILLAEVATVAIEHVYMYMNSSIIHDEILAHRLGLVPIMANPRMFEFVGETGGEPDDPTEFNTCVFKLEVKNPSDPADMPDPMPKGTSYAAGPRRTMNVFSGAMEWCPHGDQEERFEGEGGVRPVHDDILIAKLRPGQEIVAEMHCRKGIGKDHAKFSPVATASYRLLPVITLEEEIEGRDAEDLVAKCPLDVFDIEDLGGGSKRAKVARPRDCTMCRECIREPGWSEKISLSRIADHFIFGVESVGMLPPKELLKDSIQVLRQKC 1129
RV DAP V A + + L + E+ + + VK +Q + D E+ FDL+G+DASIANALRRILLAEV T+AIEHVY++ NSSII DE+LAHRLGLVP+ +PR EF E + T+ NT VFKL+V DPA PK S A +V+S +EW P G+QEERF G +RPVH+DILIAKLRPGQ I E HCRKG+GKDHAKFSPVATASYRL+P + L E +EG DA+ LV +C + +FDIED+GG A V R CTMCR CIREPGW+EKI L R +DHFIF VESVGM+ P+ELL +++ VL +KC
Sbjct: 11 RVGQDAPHVVRNAAAFES----LGSDFVEQSKRQVKVK-IQSLTDD--EIQFDLMGVDASIANALRRILLAEVPTMAIEHVYIWNNSSIIQDEVLAHRLGLVPLRVDPR--EFQAFPDHEEAEATDENTIVFKLDVTCAYDPAH-----PKDLSKAVH----ASVYSRDLEWVPQGNQEERF---GAIRPVHEDILIAKLRPGQSIALEAHCRKGVGKDHAKFSPVATASYRLMPHVELTEAVEGDDAKRLVEECQMGLFDIEDMGG-VPTAVVKDQRACTMCRNCIREPGWNEKIRLGRQSDHFIFSVESVGMIKPEELLPEALNVLMEKC 320
BLAST of mRNA_P-littoralis_Contig200.85.3 vs. uniprot
Match: A0A0P1AUD4_PLAHL (DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AUD4_PLAHL) HSP 1 Score: 324 bits (830), Expect = 2.730e-101 Identity = 169/286 (59.09%), Postives = 207/286 (72.38%), Query Frame = 2
Query: 272 KNELVFDLVGIDASIANALRRILLAEVATVAIEHVYMYMNSSIIHDEILAHRLGLVPIMANPRMFEFVGETGGEPDDPTEFNTCVFKLEVKNPSDPADMPDPMPKGTSYAAGPRRTMNVFSGAMEWCPHGDQEERFEGEGGVRPVHDDILIAKLRPGQEIVAEMHCRKGIGKDHAKFSPVATASYRLLPVITLEEEIEGRDAEDLVAKCPLDVFDIEDLGGGSKRAKVARPRDCTMCRECIREPGWSEKISLSRIADHFIFGVESVGMLPPKELLKDSIQVLRQKC 1129
++ ++FDL+GIDA+IANALRRILLAEV T+AIEHVY++ NSSII DE+LAHRLGLVP+ +PR EF G + E + T+ NT VFKL+V DP DP S +V+S +EW P G+QEERF G +RPVHDDILIAKLRPGQ + E HCRKGIGKDHAKFSPVATASYRL+P + L E+IEG DA L+ CP+++FDIED+GG + V R CTMCR CIREPGW +KI L R ADHFIF +ESVGM+ P+ELL +++ VL KC
Sbjct: 45 EDSIIFDLIGIDAAIANALRRILLAEVPTMAIEHVYIWNNSSIIQDEVLAHRLGLVPLNVDPR--EFQGFSDNEEAEATDENTIVFKLDVTCKFDPEHPKDPTKAIFS---------SVYSRDLEWVPQGNQEERF---GLIRPVHDDILIAKLRPGQSLALEAHCRKGIGKDHAKFSPVATASYRLMPKVELSEKIEGADAVSLMENCPVNLFDIEDVGG-VQSIVVKDQRACTMCRNCIREPGWDKKIRLGRQADHFIFSIESVGMIKPEELLLEALNVLVNKC 315 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig200.85.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig200.85.3 >prot_P-littoralis_Contig200.85.3 ID=prot_P-littoralis_Contig200.85.3|Name=mRNA_P-littoralis_Contig200.85.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=362bp MLGRVTKYRVNNDAPSEVFEADSEQERKDRLLLSYPERVGKNLDVKAVQPback to top mRNA from alignment at P-littoralis_Contig200:273515..279952- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig200.85.3 ID=mRNA_P-littoralis_Contig200.85.3|Name=mRNA_P-littoralis_Contig200.85.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=6438bp|location=Sequence derived from alignment at P-littoralis_Contig200:273515..279952- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig200:273515..279952- >mRNA_P-littoralis_Contig200.85.3 ID=mRNA_P-littoralis_Contig200.85.3|Name=mRNA_P-littoralis_Contig200.85.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1086bp|location=Sequence derived from alignment at P-littoralis_Contig200:273515..279952- (Pylaiella littoralis U1_48)back to top |