mRNA_P-fluviatile_contig100.934.1 (mRNA) Porterinema fluviatile SAG_2381
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig100.934.1 vs. uniprot
Match: A0A6H5KXB0_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXB0_9PHAE) HSP 1 Score: 49.7 bits (117), Expect = 7.620e-5 Identity = 21/21 (100.00%), Postives = 21/21 (100.00%), Query Frame = -2 Query: 261 HAEAVEFCRLHPSSMEGTQDR 323
HAEAVEFCRLHPSSMEGTQDR
Sbjct: 120 HAEAVEFCRLHPSSMEGTQDR 140 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig100.934.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig100.934.1 >prot_P-fluviatile_contig100.934.1 ID=prot_P-fluviatile_contig100.934.1|Name=mRNA_P-fluviatile_contig100.934.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=108bp LLNGDQHKRAHTTLKCTRVFSTRARGPQPCGYNPLAFPLRPVSRPVPADMback to top mRNA from alignment at P-fluviatile_contig100:19823..20146+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig100.934.1 ID=mRNA_P-fluviatile_contig100.934.1|Name=mRNA_P-fluviatile_contig100.934.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=324bp|location=Sequence derived from alignment at P-fluviatile_contig100:19823..20146+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig100:19823..20146+ >mRNA_P-fluviatile_contig100.934.1 ID=mRNA_P-fluviatile_contig100.934.1|Name=mRNA_P-fluviatile_contig100.934.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=648bp|location=Sequence derived from alignment at P-fluviatile_contig100:19823..20146+ (Porterinema fluviatile SAG_2381)back to top |