mRNA_P-wetherbeei_contig85.5.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig85.5.1
Unique NamemRNA_P-wetherbeei_contig85.5.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig85.5.1 vs. uniprot
Match: A0A6H5J6X8_9PHAE (NGN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6X8_9PHAE)

HSP 1 Score: 152 bits (383), Expect = 2.020e-35
Identity = 80/217 (36.87%), Postives = 130/217 (59.91%), Query Frame = 2
Query:  365 GVRCHTDTEFRWYVIQVYTSFERYAANVIENRCVDWGVRDRVDKVVVPVRQVPQTVGRSVRTKDLPMYPGYVYVSCKMNEVLRDRVNNIPKVVGFVGIRKDQNGARIPDPMPRRQVERIFANIAEAESEPVAGRIRGEFGIGDMVEITKGPYRRETGALRIVRDGEFVVRLYAFGKRMDVSVPFDAVRKLTEEEILAESEAKEAALSGSYASTYANR 1015
            GV+  TD EF WY+++ + ++E    N +E      G+ DRV+++ VP RQVP+ VG+ V  K+ P+Y GY+Y   KM+  +RD VN++ ++VGFVG  +D++   IP+ M    +E I A+    E    A +I    G+GD+VEI++GP+  + G +  ++DGE+VV++  FG+  DV + ++ VRKLTE E+    E    A+  +Y    + R
Sbjct:  188 GVKVPTDEEFHWYLLRCFATYEMRCRNSVEAYLEGAGLGDRVEEIWVPCRQVPKQVGKKVTFKEEPIYQGYIYCKVKMSPEVRDIVNDMDRIVGFVGEARDEDKKLIPERMDPEDIEGIKAS----EKALGANKIPQLLGVGDLVEISEGPFALKKGEVSKIKDGEYVVKVNTFGRNSDVRLDWNGVRKLTELEVETWFEETRRAMDATYMERQSGR 400          
BLAST of mRNA_P-wetherbeei_contig85.5.1 vs. uniprot
Match: D7FH57_ECTSI (Putative transcription antitermination protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH57_ECTSI)

HSP 1 Score: 152 bits (384), Expect = 4.080e-34
Identity = 81/217 (37.33%), Postives = 130/217 (59.91%), Query Frame = 2
Query:  365 GVRCHTDTEFRWYVIQVYTSFERYAANVIENRCVDWGVRDRVDKVVVPVRQVPQTVGRSVRTKDLPMYPGYVYVSCKMNEVLRDRVNNIPKVVGFVGIRKDQNGARIPDPMPRRQVERIFANIAEAESEPVAGRIRGEFGIGDMVEITKGPYRRETGALRIVRDGEFVVRLYAFGKRMDVSVPFDAVRKLTEEEILAESEAKEAALSGSYASTYANR 1015
            GV+  TD EF WY+++ + ++E    N +E+     G+ DRV+++ VP RQVP+ VG  V  K+ P+Y GY+Y   KM+  +RD VN++ ++VGFVG  +D++   IP+ M    +E I A+    E    A +I    G+GD+VEI++GP+  + G +  ++DGE+VV++  FG+  DV + +D VRKLTE E+    E    A+  +Y    + R
Sbjct:  211 GVKVPTDEEFHWYLLRCFATYEVRCRNSVESYLEGAGLGDRVEEIWVPCRQVPKQVGTKVTFKEEPIYQGYIYCKVKMSLEVRDIVNDMDRIVGFVGEARDEDKKLIPERMEPEDIEGIKAS----EKALGANKIPQLLGVGDLVEISEGPFALKKGEVSKIKDGEYVVKVNTFGRNSDVRLDWDGVRKLTELEVETWFEETRRAMDATYMERQSGR 423          
BLAST of mRNA_P-wetherbeei_contig85.5.1 vs. uniprot
Match: A0A7S2WSQ2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WSQ2_9STRA)

HSP 1 Score: 109 bits (273), Expect = 3.260e-21
Identity = 65/191 (34.03%), Postives = 99/191 (51.83%), Query Frame = 2
Query:  389 EFRWYVIQVYTSFERYAANVIENRCVDWGVRDRVDKVVVPVRQVPQTVGRSVRTKDLPMYPGYVYVSCKMNEVLRDRVNNIPKVVGFVGIRKDQNGAR-------IPDPMPRRQVERIFANIAEAES--EPVAGRIRGEFGIGDMVEITKGPYRRETGALRIVRDGEFVVRLYAFGKRMDVSVPFDAVRKL 934
            E +WY+I   T FE     +++    + G+R  V ++ VP + +  T G+ V TK   +YP YV+    M++ + D +     V+ FVG+R   +G         IP P+   ++++   N  E     +P  G     F IGD VEI  GP + E G LR+VRDG+ VVRL A+G+RMD+      VR+L
Sbjct:   51 ESKWYIINCVTGFELVVERLLQVMVDNVGIRSEVLEIKVPTQTLSMTRGKRVSTKQRTLYPSYVFAHLYMSQEVYDAIMATDHVMSFVGVRSATSGRGRKAAKRVIPQPLSAGEIKQFRLNEEEGAKLEDPTFG-----FSIGDFVEILTGPTKGERGYLRLVRDGQVVVRLMAYGRRMDLDFDPVDVRRL 236          
BLAST of mRNA_P-wetherbeei_contig85.5.1 vs. uniprot
Match: UPI001A95C378 (transcription termination/antitermination protein NusG n=1 Tax=Sabulicella rubraurantiaca TaxID=2811429 RepID=UPI001A95C378)

HSP 1 Score: 94.7 bits (234), Expect = 1.400e-18
Identity = 54/182 (29.67%), Postives = 89/182 (48.90%), Query Frame = 2
Query:  395 RWYVIQVYTSFERYAANVIENRCVDWGVRDRVDKVVVPVRQVPQTVGRSVRTKDLPMYPGYVYVSCKMNEVLRDRVNNIPKVVGFVGIRKDQNGARIPDPMPRRQVERIFANIAEAESEPVAGRIRGEFGIGDMVEITKGPYRRETGALRIVRD--GEFVVRLYAFGKRMDVSVPFDAVRKL 934
            RWYV+ VY+ FE+  A  I ++    G+ DR++ ++VP  QV +      R  +   +PGYV V  +M++     V + PKV GF+G R        P P+P  +  R+   + E+  +P    I   F +G+ V ++ GP+    G +  V +  G   V +  FG+   V + +  V KL
Sbjct:    5 RWYVVHVYSGFEKKIAEQIRHQAEKIGLADRIEDILVPTEQVTEVRRGQKREAERKFFPGYVLVKMEMDDETWHLVRDTPKVTGFLGARNK------PQPIPESEAMRMVQQLTESAEKPKRPAIT--FEVGEQVRVSDGPFTSFNGTVEEVDEEKGRVKVSVSIFGRSTPVELEYGQVEKL 178          
BLAST of mRNA_P-wetherbeei_contig85.5.1 vs. uniprot
Match: A0A840XXB8_9PROT (Transcription termination/antitermination protein NusG n=13 Tax=Roseomonas TaxID=125216 RepID=A0A840XXB8_9PROT)

HSP 1 Score: 94.4 bits (233), Expect = 1.900e-18
Identity = 58/185 (31.35%), Postives = 91/185 (49.19%), Query Frame = 2
Query:  389 EFRWYVIQVYTSFERYAANVIENRCVDWGVRDRVDKVVVPVRQVPQTV-GRSVRTKDLPMYPGYVYVSCKMNEVLRDRVNNIPKVVGFVGIRKDQNGARIPDPMPRRQVERIFANIAEAESEPVAGRIRGEFGIGDMVEITKGPYRRETGALRIVRD--GEFVVRLYAFGKRMDVSVPFDAVRKL 934
            E +WYV+ VY+ FE+  A  I+ +    G+ D+ D+V+VP  QV +   G+ V T D   +PGYV V  +M +     V + PKV GF+G R        P P+P  + ER+   + E   +P    +   F +G+ V +  GP+    G +  V +  G   V +  FG+   V + +  V KL
Sbjct:    3 EKKWYVVHVYSGFEKKIAEQIKQQAAQKGLADKFDEVLVPTEQVTEVRRGQKVDT-DRKFFPGYVLVKMEMTDEAWHLVKDTPKVTGFLGSRNK------PQPVPASEAERLLKQVQEGVEKPRKPAV--VFEVGEQVRVADGPFTSFNGVVEEVDEEKGRVKVSVSIFGRSTPVDLEYGQVEKL 178          
BLAST of mRNA_P-wetherbeei_contig85.5.1 vs. uniprot
Match: K2DX93_9BACT (Transcription termination/antitermination protein NusG n=3 Tax=Bacteria TaxID=2 RepID=K2DX93_9BACT)

HSP 1 Score: 94.0 bits (232), Expect = 2.590e-18
Identity = 52/183 (28.42%), Postives = 95/183 (51.91%), Query Frame = 2
Query:  392 FRWYVIQVYTSFERYAANVIENRCVDWGVRDRVDKVVVPVRQVPQTVGRSVRTKDLPMYPGYVYVSCKMNEVLRDRVNNIPKVVGFVGIRKDQNGARIPDPMPRRQVERIFANIAEAESEPVAGRIRGEFGIGDMVEITKGPYRRETGALRIVRDGEFVVRLYA--FGKRMDVSVPFDAVRKL 934
            FRWYV+ VY+ FE+  A  I+ +    G+ +++D V+VP  +V +    +  T +   +PGY+ V  K+++ +   + + PKV GF+G R        P P+ + +V+R+ A + E   +P +      F IG+ V + +GP+    G +  V D +  V++    FG+   + + F  V K+
Sbjct:    5 FRWYVVNVYSGFEKKVAEHIQEQAAKKGLAEQIDSVLVPTEEVVEIKKGAKVTSERQFFPGYILVKMKLSDEIWHLIRHTPKVSGFLGARGK------PVPVSQTEVDRVLAQVQEGIEKPKSSIT---FEIGEQVRVCEGPFSSFNGVVEEVDDEKQRVKVAVSIFGRSTPIDLDFIQVEKM 178          
BLAST of mRNA_P-wetherbeei_contig85.5.1 vs. uniprot
Match: A0A7H1MZF1_9PROT (Transcription termination/antitermination protein NusG n=1 Tax=Defluviicoccus vanus TaxID=111831 RepID=A0A7H1MZF1_9PROT)

HSP 1 Score: 92.8 bits (229), Expect = 6.200e-18
Identity = 59/184 (32.07%), Postives = 89/184 (48.37%), Query Frame = 2
Query:  389 EFRWYVIQVYTSFERYAANVIENRCVDWGVRDRVDKVVVPVRQVPQTVGRSVRTKDLPMYPGYVYVSCKMNEVLRDRVNNIPKVVGFVGIRKDQNGARIPDPMPRRQVERIFANIAEAESEPVAGRIRGEFGIGDMVEITKGPYRRETGALRIVRDGE--FVVRLYAFGKRMDVSVPFDAVRKL 934
            E RWYVI VY+ FER  A  IE +    G++DR+ +V+VP+ QV +         D   +PGYV V  +M +     V N PKV GF+G     N  R P P+   + +RI   + E    P    +   F +G+ V ++ GP+   +G +  V +      V +  FG+   V + +  V KL
Sbjct:    2 EPRWYVIHVYSGFERKVAQSIEEQARQAGMQDRISQVMVPMEQVVEVRRGKAVNADRKFFPGYVLVKMEMTDDTWHLVKNTPKVTGFLG-----NRGR-PTPIGEDEAKRILYQVQEGIERPKPAIV---FEVGEQVRVSDGPFTSFSGLVEEVDEARSRLKVAVSIFGRSTPVELEYAQVEKL 176          
BLAST of mRNA_P-wetherbeei_contig85.5.1 vs. uniprot
Match: A0A1W1CD60_9ZZZZ (Transcription antitermination protein NusG n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A1W1CD60_9ZZZZ)

HSP 1 Score: 90.1 bits (222), Expect = 5.370e-17
Identity = 50/184 (27.17%), Postives = 93/184 (50.54%), Query Frame = 2
Query:  389 EFRWYVIQVYTSFERYAANVIENRCVDWGVRDRVDKVVVPVRQVPQTVGRSVRTKDLPMYPGYVYVSCKMNEVLRDRVNNIPKVVGFVGIRKDQNGARIPDPMPRRQVERIFANIAEAESEPVAGRIRGEFGIGDMVEITKGPYRRETGALRI--VRDGEFVVRLYAFGKRMDVSVPFDAVRKL 934
            +F+WY IQ Y   E+     IE   VD+G+ +++D++VVP  +V +      +  +  +YPGY + S  ++  L  ++ ++P+V  F+G +K       P P+ +  V+ I   + E +S P   R + +F   +MV I  GP+   TG +    +  G+  + +  FG+   V + +  V K+
Sbjct:    2 DFQWYAIQTYAGSEQSVKKAIEQLAVDFGIEEKIDRIVVPTEEVIEVKNGEKKISERSLYPGYAFASIALDTDLWHKIQSLPRVSRFIGEQKT------PTPLNQSDVKVILEKL-EHKSAP---RPKVDFETNEMVRIVDGPFANFTGMVEEYDLDHGKLKLNVSIFGRNTPVEIDYTQVEKI 175          
BLAST of mRNA_P-wetherbeei_contig85.5.1 vs. uniprot
Match: A0A7V2WXR7_9PROT (Transcription termination/antitermination protein NusG n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A7V2WXR7_9PROT)

HSP 1 Score: 90.1 bits (222), Expect = 5.510e-17
Identity = 56/182 (30.77%), Postives = 85/182 (46.70%), Query Frame = 2
Query:  395 RWYVIQVYTSFERYAANVIENRCVDWGVRDRVDKVVVPVRQVPQTVGRSVRTKDLPMYPGYVYVSCKMNEVLRDRVNNIPKVVGFVGIRKDQNGARIPDPMPRRQVERIFANIAEAESEPVAGRIRGEFGIGDMVEITKGPYRRETGALRIVRD--GEFVVRLYAFGKRMDVSVPFDAVRKL 934
            RWY+I VY+ FE+  A  I  +    G+    ++V+VP  +V +       + +   +PGYV +   +N+     V NIPKV GF+G      G R P P+P  + ERI   + E    P   R    F +GD V +  GP+    G +  V +  G   V +  FG+   V + +  V KL
Sbjct:    5 RWYIIHVYSGFEKKVAEAIREQAAQKGLEGCFEEVLVPTEEVVEIRRGKKVSAERKFFPGYVLIKMVLNDDTWSLVRNIPKVTGFLG-----PGGR-PAPIPEEEAERIRRQVQEGVEHP---RPLVSFMVGDRVRVVDGPFNTFEGVVEEVDEARGRVKVAVSIFGRATPVELEYSQVEKL 177          
BLAST of mRNA_P-wetherbeei_contig85.5.1 vs. uniprot
Match: A0A7C7MEH6_9GAMM (Transcription termination/antitermination protein NusG n=6 Tax=root TaxID=1 RepID=A0A7C7MEH6_9GAMM)

HSP 1 Score: 89.0 bits (219), Expect = 1.390e-16
Identity = 51/183 (27.87%), Postives = 94/183 (51.37%), Query Frame = 2
Query:  389 EFRWYVIQVYTSFERYAANVIENRCVDWGVRDRVDKVVVPVRQVPQTVGRSVRTKDLPMYPGYVYVSCKMNEVLRDRVNNIPKVVGFVGIRKDQNGARIPDPMPRRQVERIFANIAEAESEPVAGRIRGEFGIGDMVEITKGPYRRETGALRIVR--DGEFVVRLYAFGKRMDVSVPFDAVRK 931
            E++WYV+QVY+++E+    ++E+R    G+ ++   +VVP  ++ +  G   +T +   +PGYV V+  +N+     VN+IP V+GFVG       +  P P+  R+V  I     +A + P   R +  +  G++V + +GP+    G +  V     +  V +   G+   V + F+ V K
Sbjct:    2 EYQWYVLQVYSNYEKKVLTMLEDRSKVLGLSEQFADIVVPTEEIVEMKGGQKKTTERKFFPGYVLVNMNLNDETWHFVNSIPNVMGFVG-----GSSEKPAPISDREVMIILNKAEDAANAP---RPKTTYQPGEVVRVIEGPFNDFNGVVEKVNYEKNKLFVAVQILGRATPVELNFNQVEK 176          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig85.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J6X8_9PHAE2.020e-3536.87NGN domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FH57_ECTSI4.080e-3437.33Putative transcription antitermination protein n=1... [more]
A0A7S2WSQ2_9STRA3.260e-2134.03Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
UPI001A95C3781.400e-1829.67transcription termination/antitermination protein ... [more]
A0A840XXB8_9PROT1.900e-1831.35Transcription termination/antitermination protein ... [more]
K2DX93_9BACT2.590e-1828.42Transcription termination/antitermination protein ... [more]
A0A7H1MZF1_9PROT6.200e-1832.07Transcription termination/antitermination protein ... [more]
A0A1W1CD60_9ZZZZ5.370e-1727.17Transcription antitermination protein NusG n=1 Tax... [more]
A0A7V2WXR7_9PROT5.510e-1730.77Transcription termination/antitermination protein ... [more]
A0A7C7MEH6_9GAMM1.390e-1627.87Transcription termination/antitermination protein ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig85contigP-wetherbeei_contig85:4619..8428 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog526224.Bmur_1953
Preferred namenusG
PFAMsKOW,NusG
Model size3042
Max annot lvl203691|Spirochaetes
KEGG koko:K02601
Hectar predicted targeting categoryother localisation
Exons4
Evalue3.26e-11
EggNOG OGsCOG0250@1|root,COG0250@2|Bacteria,2J7FV@203691|Spirochaetes
Ec32 ortholog descriptionputative transcription antitermination protein
Ec32 orthologEc-13_000840.1
DescriptionParticipates in transcription elongation, termination and antitermination
Cds size2235
COG categoryK
BRITEko00000,ko03009,ko03021
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig85.5.1prot_P-wetherbeei_contig85.5.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig85 5181..8183 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187043.5630765-UTR-P-wetherbeei_contig85:4618..51801683187043.5630765-UTR-P-wetherbeei_contig85:4618..5180Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig85 4619..5180 +
1683187043.6072319-UTR-P-wetherbeei_contig85:8183..84281683187043.6072319-UTR-P-wetherbeei_contig85:8183..8428Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig85 8184..8428 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187043.5724442-CDS-P-wetherbeei_contig85:5180..51821683187043.5724442-CDS-P-wetherbeei_contig85:5180..5182Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig85 5181..5182 +
1683187043.5804846-CDS-P-wetherbeei_contig85:5535..56801683187043.5804846-CDS-P-wetherbeei_contig85:5535..5680Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig85 5536..5680 +
1683187043.588561-CDS-P-wetherbeei_contig85:5845..69611683187043.588561-CDS-P-wetherbeei_contig85:5845..6961Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig85 5846..6961 +
1683187043.5993176-CDS-P-wetherbeei_contig85:7211..81831683187043.5993176-CDS-P-wetherbeei_contig85:7211..8183Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig85 7212..8183 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig85.5.1

>prot_P-wetherbeei_contig85.5.1 ID=prot_P-wetherbeei_contig85.5.1|Name=mRNA_P-wetherbeei_contig85.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=745bp
MYPGYVYVSCKMNEVLRDRVNNIPKVVGFVGIRKDQNGARIPDPMPRRQV
ERIFANIAEAESEPVAGRIRGEFGIGDMVEITKGPYRRETGALRIVRDGE
FVVRLYAFGKRMDVSVPFDAVRKLTEEEILAESEAKEAALSGSYASTYAN
RDRNGPLGAAGGGPGGSNGPVGAASAGYVGTARYERDIQKREQGPWSGAE
RRVRREQGGGGRDGAYNARGGTSPAFGGESGSGGGRGYDDAPRPGIGRMG
RPLVKPGGSRAAAANAGGTIGNDFFDSLNDLLDDPNDGGDDAAGSGPADA
RRGRADVGAGGFIEDGVGGSGDGGGGGMPLAASAFSGLDLEAEGGGEGED
DGFFEALMRELKAPAAGDDGAVGDPVPSPQSRGAQRSQRAGGASVTAVSG
GAAGRRRGGDNDDADFGISVAEPHVFDLDLDMDLDFEKELSAFLDSSGSP
NPAVGAVAAAGGDANENDRGQPLSKMGGAAAAGASSARLGNAGGGAPEAA
AAAGSAANGLSGFDGDAELESLLAELERGDLGDVPLMPLPPPSPFSAGRG
GAPARRREGSVDREVGSPPVRPAAGAAAPAAAGIFTGMGADATTAASEGQ
WPLISDFDLLPPAAERTQQPRQSPVVGRGPGAAEPRPPLPPPPAAAAVAA
AAPEEAATTVADEPRTAAPPAAAAIAAAAAAEPKAAAGGAAAAAATETPA
GGRGGDPYKALKVAELKEACRSRGLPVGGKKQDLLERLAAADGG*
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mRNA from alignment at P-wetherbeei_contig85:4619..8428+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig85.5.1 ID=mRNA_P-wetherbeei_contig85.5.1|Name=mRNA_P-wetherbeei_contig85.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3810bp|location=Sequence derived from alignment at P-wetherbeei_contig85:4619..8428+ (Phaeothamnion wetherbeei SAG_119_79)
TTTGAGCGTCCTGACGGTAGCTCCGGCCATTGTCCGGGCATTCCCGCTTT GCAGCAGGCCCTACTGCCACCGCAGCCGTCCGCGTCCTCAAGCTGAAACC TCCGAGGCCCTGACGAACCGTCCGGCGGGAAAGAGACCGACGCTGCCTTG GAGCACGGACCCCCTGAGAGCAACATCACTGTTTGCCGCAACTGAAGACG AGGACGCAGAAAACGATGATGGTGTTGACAACCTGAGCGAACCTCCGTCC CAACCGCGCACCCGCGCGCCGGCCGTGAGGCGCACCATCTCCGCCGCCGA GCTGGACGTCCTGTCGGGTGCCGATGCCGACGTGTTGTCGGTGGAGCGGG AGGCGCCCGACAGCGGCGTGCGCTGCCACACCGACACGGAGTTCCGCTGG TACGTCATCCAAGTCTACACCTCCTTCGAGCGCTACGCCGCCAACGTCAT CGAGAATCGCTGCGTGGACTGGGGCGTTCGGGACCGGGTCGACAAGGTGG TGGTGCCGGTGCGGCAAGTGCCGCAGACGGTCGGTCGCAGCGTCCGCACA AAGGATCTCCCCATGTGAGTTTTCTGCGGTTCATTTAAGTATCGTTTCAG AATGAAGCGATTGCTACAGTTCGTGAGGCTTTCCTCTAGAAGTGACTTGC ATGGTTGGTTACTCTCGTAGTTCGTGTGTGATCATACTCGCCGTTCAGAA CGAATCGGTGGAGCACCTTTCTGAAGTAGCATATACTTTTTGGTTCCTTC TTCTTTTCAGCTCAACGCTCCTTTCCCAAGCAATATTGCTTCTGTCTTCG GCTCGATCCTAAAGCCTCAGTCCTCAAACTGTCATTCACGAGGTATGCAC CCCCGTTTCATCGCCAAAAGCACTCAAACGTCAATTCTGCCTGCCTGAAC ACTCTCTGACTTCGCAGGTACCCGGGCTACGTGTACGTGTCGTGCAAGAT GAACGAGGTGCTGCGCGACCGCGTCAATAACATCCCCAAGGTCGTCGGCT TCGTCGGCATCCGCAAGGACCAGAACGGCGCCCGCATTCCGGACCCCATG CCGCGCCGCCAGGTAAAGTATCTTTCAGGGCATGATGGTTCTAAGGTTTT AGGGTTGGTGAAGCGCGTCTTCTACCTTCACCCTTCCTTCGACGTGGGTG CGCTTTTTCGGTTCAAATGTGTCCGAAGAACCAAACCACCGTGTGGGTTT CGCACCTCATGCCGCGCGAATCGCCAGGTGGAGCGCATCTTCGCCAACAT TGCCGAGGCGGAGTCAGAGCCAGTCGCCGGCCGGATCCGCGGCGAGTTTG GCATCGGCGACATGGTGGAAATCACGAAGGGGCCGTACCGCCGGGAGACG GGCGCGCTGCGCATCGTTCGGGACGGGGAATTTGTGGTCCGGCTGTACGC GTTCGGGAAGCGAATGGACGTCTCGGTGCCGTTCGACGCCGTCCGGAAGC TGACCGAGGAGGAGATCCTGGCTGAGTCCGAAGCAAAGGAGGCCGCCCTG AGCGGCTCCTACGCGTCCACCTACGCCAACCGGGATCGGAACGGCCCGCT CGGCGCCGCCGGCGGCGGTCCTGGCGGTTCAAATGGTCCGGTAGGCGCCG CCAGCGCAGGCTACGTGGGGACGGCGCGCTACGAGAGGGACATCCAGAAG CGGGAGCAGGGACCGTGGAGTGGCGCGGAGCGGCGGGTGCGGCGCGAGCA GGGCGGCGGCGGCCGGGACGGCGCCTACAATGCCCGTGGGGGCACGTCAC CAGCGTTTGGAGGGGAGTCCGGCAGCGGCGGCGGCAGGGGCTACGACGAC GCGCCACGGCCGGGCATCGGGCGGATGGGTCGCCCGCTGGTGAAGCCTGG CGGATCTCGTGCGGCGGCAGCCAACGCCGGCGGCACCATTGGTAACGACT TCTTTGACAGCCTCAACGACCTTCTCGACGATCCGAACGACGGCGGCGAC GACGCGGCCGGAAGCGGCCCGGCCGATGCCCGCCGCGGCCGCGCCGACGT CGGTGCGGGCGGCTTTATCGAGGATGGCGTTGGCGGCAGCGGCGATGGCG GCGGGGGCGGCATGCCGCTTGCGGCAAGCGCGTTCTCGGGGCTGGACCTC GAGGCGGAAGGTGGCGGCGAGGGCGAAGACGACGGCTTCTTTGAGGCGCT TATGCGCGAGCTGAAGGCGCCGGCGGCCGGTGATGATGGCGCCGTTGGTG ATCCTGTGCCATCGCCGCAATCTAGAGGCGCGCAGCGGAGCCAGCGGGCT GGCGGCGCGTCGGTGACGGCAGTCAGCGGGGGCGCTGCCGGGCGGCGACG CGGGGGCGACAACGACGACGCGGACTTCGGCATATCTGTCGCGGTGAGCG TGCCGCTGAAACGCTTTCAGTGTTTGCGGTTCGTGGCGAGAGTGTGTTTC TGTTCCTCTTTCTAGCAACCTTGGTAGATCGGCGGTTATGCATCCGCCCG GCTCTTTTTCGTCGTCTTGCACCTTTTCCTTCCCCTCGCACTCGCCTCTC GGTGACCTGCCGCTGTTGGTAGTACTTGACCCGCTACTACCTATTTCGAT CTCGCCCGGCCCCAATTTTAAAAACCTGGACGGACACGTCCAGGAGCCGC ACGTTTTTGATCTGGACCTGGACATGGACCTTGACTTCGAGAAGGAGCTG AGCGCTTTCCTCGACTCCAGCGGCTCACCAAATCCCGCGGTCGGCGCCGT CGCCGCCGCTGGCGGCGACGCCAACGAGAACGATCGCGGTCAACCTCTGA GCAAGATGGGCGGAGCGGCGGCAGCAGGCGCTTCTTCTGCAAGATTAGGA AACGCGGGCGGTGGCGCACCAGAGGCCGCTGCAGCGGCGGGTTCGGCCGC CAACGGTCTGTCGGGCTTTGACGGCGACGCCGAGCTGGAGAGCCTGCTGG CGGAGCTAGAGCGCGGCGACCTCGGCGACGTGCCGCTGATGCCGCTGCCG CCGCCGTCGCCGTTCTCTGCGGGCAGAGGCGGGGCTCCTGCAAGGCGCCG GGAAGGTTCTGTGGACCGCGAAGTAGGCAGTCCTCCAGTACGGCCTGCTG CTGGGGCGGCGGCGCCGGCGGCGGCTGGGATTTTCACCGGCATGGGAGCC GATGCCACCACTGCTGCATCGGAGGGACAGTGGCCACTGATCAGCGATTT TGACCTGCTTCCGCCCGCCGCGGAGCGGACGCAGCAGCCCCGGCAGTCAC CGGTCGTCGGTCGCGGACCAGGCGCTGCGGAGCCGCGACCACCACTGCCA CCGCCGCCAGCAGCAGCGGCGGTGGCGGCGGCGGCACCGGAAGAGGCCGC GACTACGGTTGCAGACGAACCGCGGACCGCAGCACCGCCGGCTGCGGCGG CCATCGCCGCCGCAGCCGCCGCTGAGCCGAAAGCGGCTGCCGGCGGCGCC GCTGCTGCCGCTGCAACGGAAACGCCTGCCGGGGGCCGCGGCGGGGACCC GTATAAGGCGTTAAAAGTGGCGGAGCTAAAGGAGGCGTGCCGGTCCCGAG GGCTGCCCGTCGGCGGCAAGAAGCAGGACCTGCTGGAACGGCTCGCGGCG GCGGACGGCGGGTAGCCAGGATGAAACTGGTGCCTCATCACATTTCTTGG TGTTTGTTTCGCAACAGTCAGCGCCCCGATTGGTTGTCTGTTGTCATTGT CCGATGCCACGGCGTTTGCTAGCGTCGGATTAGCGGCGGCGGGGCTGCGC GGCGACGGGAAATACGTTTATTTGACCGCAAGCTGCCAATAAAGAGATAG AGAAAGGGTTGAGCCAGGGCAGGAACAGACATCAGCAGCAACACACTTTT TTGATTTTCC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig85:4619..8428+

>mRNA_P-wetherbeei_contig85.5.1 ID=mRNA_P-wetherbeei_contig85.5.1|Name=mRNA_P-wetherbeei_contig85.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2235bp|location=Sequence derived from alignment at P-wetherbeei_contig85:4619..8428+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTACCCGGGCTACGTGTACGTGTCGTGCAAGATGAACGAGGTGCTGCG
CGACCGCGTCAATAACATCCCCAAGGTCGTCGGCTTCGTCGGCATCCGCA
AGGACCAGAACGGCGCCCGCATTCCGGACCCCATGCCGCGCCGCCAGGTG
GAGCGCATCTTCGCCAACATTGCCGAGGCGGAGTCAGAGCCAGTCGCCGG
CCGGATCCGCGGCGAGTTTGGCATCGGCGACATGGTGGAAATCACGAAGG
GGCCGTACCGCCGGGAGACGGGCGCGCTGCGCATCGTTCGGGACGGGGAA
TTTGTGGTCCGGCTGTACGCGTTCGGGAAGCGAATGGACGTCTCGGTGCC
GTTCGACGCCGTCCGGAAGCTGACCGAGGAGGAGATCCTGGCTGAGTCCG
AAGCAAAGGAGGCCGCCCTGAGCGGCTCCTACGCGTCCACCTACGCCAAC
CGGGATCGGAACGGCCCGCTCGGCGCCGCCGGCGGCGGTCCTGGCGGTTC
AAATGGTCCGGTAGGCGCCGCCAGCGCAGGCTACGTGGGGACGGCGCGCT
ACGAGAGGGACATCCAGAAGCGGGAGCAGGGACCGTGGAGTGGCGCGGAG
CGGCGGGTGCGGCGCGAGCAGGGCGGCGGCGGCCGGGACGGCGCCTACAA
TGCCCGTGGGGGCACGTCACCAGCGTTTGGAGGGGAGTCCGGCAGCGGCG
GCGGCAGGGGCTACGACGACGCGCCACGGCCGGGCATCGGGCGGATGGGT
CGCCCGCTGGTGAAGCCTGGCGGATCTCGTGCGGCGGCAGCCAACGCCGG
CGGCACCATTGGTAACGACTTCTTTGACAGCCTCAACGACCTTCTCGACG
ATCCGAACGACGGCGGCGACGACGCGGCCGGAAGCGGCCCGGCCGATGCC
CGCCGCGGCCGCGCCGACGTCGGTGCGGGCGGCTTTATCGAGGATGGCGT
TGGCGGCAGCGGCGATGGCGGCGGGGGCGGCATGCCGCTTGCGGCAAGCG
CGTTCTCGGGGCTGGACCTCGAGGCGGAAGGTGGCGGCGAGGGCGAAGAC
GACGGCTTCTTTGAGGCGCTTATGCGCGAGCTGAAGGCGCCGGCGGCCGG
TGATGATGGCGCCGTTGGTGATCCTGTGCCATCGCCGCAATCTAGAGGCG
CGCAGCGGAGCCAGCGGGCTGGCGGCGCGTCGGTGACGGCAGTCAGCGGG
GGCGCTGCCGGGCGGCGACGCGGGGGCGACAACGACGACGCGGACTTCGG
CATATCTGTCGCGGAGCCGCACGTTTTTGATCTGGACCTGGACATGGACC
TTGACTTCGAGAAGGAGCTGAGCGCTTTCCTCGACTCCAGCGGCTCACCA
AATCCCGCGGTCGGCGCCGTCGCCGCCGCTGGCGGCGACGCCAACGAGAA
CGATCGCGGTCAACCTCTGAGCAAGATGGGCGGAGCGGCGGCAGCAGGCG
CTTCTTCTGCAAGATTAGGAAACGCGGGCGGTGGCGCACCAGAGGCCGCT
GCAGCGGCGGGTTCGGCCGCCAACGGTCTGTCGGGCTTTGACGGCGACGC
CGAGCTGGAGAGCCTGCTGGCGGAGCTAGAGCGCGGCGACCTCGGCGACG
TGCCGCTGATGCCGCTGCCGCCGCCGTCGCCGTTCTCTGCGGGCAGAGGC
GGGGCTCCTGCAAGGCGCCGGGAAGGTTCTGTGGACCGCGAAGTAGGCAG
TCCTCCAGTACGGCCTGCTGCTGGGGCGGCGGCGCCGGCGGCGGCTGGGA
TTTTCACCGGCATGGGAGCCGATGCCACCACTGCTGCATCGGAGGGACAG
TGGCCACTGATCAGCGATTTTGACCTGCTTCCGCCCGCCGCGGAGCGGAC
GCAGCAGCCCCGGCAGTCACCGGTCGTCGGTCGCGGACCAGGCGCTGCGG
AGCCGCGACCACCACTGCCACCGCCGCCAGCAGCAGCGGCGGTGGCGGCG
GCGGCACCGGAAGAGGCCGCGACTACGGTTGCAGACGAACCGCGGACCGC
AGCACCGCCGGCTGCGGCGGCCATCGCCGCCGCAGCCGCCGCTGAGCCGA
AAGCGGCTGCCGGCGGCGCCGCTGCTGCCGCTGCAACGGAAACGCCTGCC
GGGGGCCGCGGCGGGGACCCGTATAAGGCGTTAAAAGTGGCGGAGCTAAA
GGAGGCGTGCCGGTCCCGAGGGCTGCCCGTCGGCGGCAAGAAGCAGGACC
TGCTGGAACGGCTCGCGGCGGCGGACGGCGGGTAG
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