mRNA_P-wetherbeei_contig6347.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6347.2.1 vs. uniprot
Match: D7G1Y9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1Y9_ECTSI) HSP 1 Score: 274 bits (701), Expect = 6.320e-91 Identity = 133/206 (64.56%), Postives = 169/206 (82.04%), Query Frame = 1
Query: 10 LPEDAIKLFRIRKTCLKMLKRRGYLVPEHELTWNTEQFSEKYGSNPLRREVTILVERPEDDKDRLFVFFPEEEKVGVKPIRAYAERMGEENVNAAIIVVKGGITPFARTAIGELCAQRHVSIEDFKDAELMVDITEHVLVPEHKASLHLQPKTELLKRYKLKDAQLPRILLTDPVARYYGLKKGQVVKIIRPSETAGRYVTYRLCI 627
L ++ K++RIR+TC+KML++RGY V + ++ +E F ++YG P R ++T+LVE+ +D D++FVFFP++EKVGVKPIR+Y+E+M EE V AIIV+KGGITPFAR+AI ELCAQR V +EDFKDAELM+DITEH LVPEH+ L + K ELLKRYKLKD QLPRI TDPVAR++G++KGQV KI RPSETAGRYVTYRLCI
Sbjct: 8 LSDEGHKIYRIRQTCMKMLEKRGYNVLQEHVSMTSEAFLQQYGPEPNRHDLTLLVEKVDDPMDQIFVFFPDDEKVGVKPIRSYSEKMLEEEVKRAIIVIKGGITPFARSAIQELCAQREVQVEDFKDAELMLDITEHTLVPEHQV-LSSEQKAELLKRYKLKDTQLPRIQSTDPVARFFGMQKGQVCKITRPSETAGRYVTYRLCI 212
BLAST of mRNA_P-wetherbeei_contig6347.2.1 vs. uniprot
Match: A0A835YLJ3_9STRA (RNA polymerase Rpb5, C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLJ3_9STRA) HSP 1 Score: 270 bits (689), Expect = 4.370e-89 Identity = 136/207 (65.70%), Postives = 166/207 (80.19%), Query Frame = 1
Query: 19 DAIKLFRIRKTCLKMLKRRGYLVPEHELTWN----TEQFSEKYGSNPLRREVTILVERPEDDKDRLFVFFPEEEKVGVKPIRAYAERMGEENVNAAIIVVKGGITPFARTAIGELCAQRHVSIEDFKDAELMVDITEHVLVPEHKASLHLQPKTELLKRYKLKDAQLPRILLTDPVARYYGLKKGQVVKIIRPSETAGRYVTYRLCI 627
+ KLFRIRKTCLKML +RGY V + ++ + T++F E++G NP R ++TILVE+ +D DR+FVFFP+EEKVGVK IR Y +RM +ENV +IIVV+GG+TP +R A +LC QR V IEDFKDAELMVDIT+HVLVPEH+ L+ + K ELLKRYKL D QLPRI TDPVARYYGL++GQVVKIIRPSETAGRYVTYRLC+
Sbjct: 8 EGSKLFRIRKTCLKMLSKRGYNVADEHISGSNASATQRFIEQFGDNPSREQMTILVEKVDDPSDRIFVFFPDEEKVGVKTIRTYGDRMKDENVRKSIIVVRGGMTPLSRDANAQLCQQRGVQIEDFKDAELMVDITDHVLVPEHQV-LNNEEKAELLKRYKLTDTQLPRIHSTDPVARYYGLQRGQVVKIIRPSETAGRYVTYRLCM 213
BLAST of mRNA_P-wetherbeei_contig6347.2.1 vs. uniprot
Match: A0A482UUV9_9ARCH (DNA-directed RNA polymerase subunit Rpo5 n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UUV9_9ARCH) HSP 1 Score: 248 bits (633), Expect = 1.330e-80 Identity = 125/209 (59.81%), Postives = 161/209 (77.03%), Query Frame = 1
Query: 1 MGDLPEDAIKLFRIRKTCLKMLKRRGYLVPEHELTWNTEQFSEKYGSNPLRREVTILVERPEDDKDRLFVFFPEEEKVGVKPIRAYAERMGEENVNAAIIVVKGGITPFARTAIGELCAQRHVSIEDFKDAELMVDITEHVLVPEHKASLHLQPKTELLKRYKLKDAQLPRILLTDPVARYYGLKKGQVVKIIRPSETAGRYVTYRLCI 627
+G L +A K+FR+RKTCLKML +RGY+V E+ L +T+QF +K+G P R +TIL E+ +D D++FVFFPE+EKVGV PI+ Y +RM NV AIIVVK +TPFARTA+ E+ + R +E F+DAEL+VDITEH LVPEH L Q K ELL+RY+LK +QLPRI + DP+ARY GL++GQVVKI+RPSETAGRYVTYR+C+
Sbjct: 5 VGGLNPEASKMFRVRKTCLKMLSKRGYVVDENALQMSTDQFRDKFGETPSRDSLTILAEKSDDPTDQIFVFFPEDEKVGVNPIKIYCQRMKTANVYRAIIVVKINLTPFARTAVKEM-SLRGYRVEYFRDAELLVDITEHKLVPEH-IVLTDQQKLELLERYRLKVSQLPRIQIADPIARYMGLRQGQVVKIVRPSETAGRYVTYRICV 211
BLAST of mRNA_P-wetherbeei_contig6347.2.1 vs. uniprot
Match: K3WP89_GLOUD (Uncharacterized protein n=27 Tax=Oomycota TaxID=4762 RepID=K3WP89_GLOUD) HSP 1 Score: 242 bits (618), Expect = 2.150e-78 Identity = 123/206 (59.71%), Postives = 156/206 (75.73%), Query Frame = 1
Query: 1 MGDLPEDAIKLFRIRKTCLKMLKRRGYLVPEHELTWNTEQFSEKYGSNPLRREVTILVERPEDDKDRLFVFFPEEEKVGVKPIRAYAERMGEENVNAAIIVVKGGITPFARTAIGELCAQRHVSIEDFKDAELMVDITEHVLVPEHKASLHLQPKTELLKRYKLKDAQLPRILLTDPVARYYGLKKGQVVKIIRPSETAGRYVTYR 618
M L +A +L+R+RKT +KML RGY+V E+EL E F ++G NP R +TILVE+ +D D LFVFFPE+ KVGVKPIR + RM +ENV+ AI+VV+ GITPFAR A+ E+ A R+ IE FK+ EL+VDITEH LVP H+ L+ K LLKRY++KD+QLPR+ +TDP+ARYYG+ +GQVVKIIRPSETAGRYVTYR
Sbjct: 1 MSGLTPEASRLYRVRKTTVKMLHNRGYIVSENELVMTPESFQHQFGDNPTREMMTILVEKIDDPSDNLFVFFPEDTKVGVKPIRTFCNRMKDENVSKAILVVQEGITPFARQALNEM-APRY-KIEHFKETELLVDITEHTLVPVHRV-LNRDEKAALLKRYRIKDSQLPRMQVTDPIARYYGITRGQVVKIIRPSETAGRYVTYR 203
BLAST of mRNA_P-wetherbeei_contig6347.2.1 vs. uniprot
Match: A0A5D6XUM4_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XUM4_9STRA) HSP 1 Score: 244 bits (624), Expect = 1.120e-76 Identity = 126/209 (60.29%), Postives = 156/209 (74.64%), Query Frame = 1
Query: 1 MGDLPEDAIKLFRIRKTCLKMLKRRGYLVPEHELTWNTEQFSEKYGSNPLRREVTILVERPEDDKDRLFVFFPEEEKVGVKPIRAYAERMGEENVNAAIIVVKGGITPFARTAIGELCAQRHVSIEDFKDAELMVDITEHVLVPEHKASLHLQPKTELLKRYKLKDAQLPRILLTDPVARYYGLKKGQVVKIIRPSETAGRYVTYRLCI 627
M L +A +LFR+RKT +KML RGY+V E+EL E F +++G NP R +TILVE+ +D D LFVFFPE+ KVGVKPIR Y RM +ENV AI+VV+ GITPFAR A+ E+ A R+ IE FK+ EL+VDITEH LVP H+ L K LLKRY++KD+QLPR+ +TDP+ARYYG+ +GQVVKIIRPSETAGRYVTYR I
Sbjct: 1 MSGLTPEASRLFRVRKTTVKMLHNRGYIVSENELVMTPESFQQQFGDNPTREMMTILVEKIDDPSDNLFVFFPEDTKVGVKPIRNYCNRMKDENVTKAILVVQEGITPFARQALNEM-APRY-KIEHFKETELLVDITEHTLVPVHRV-LSRDEKAALLKRYRIKDSQLPRMQVTDPIARYYGITRGQVVKIIRPSETAGRYVTYRAVI 206
BLAST of mRNA_P-wetherbeei_contig6347.2.1 vs. uniprot
Match: A0A2P4Y6Z7_9STRA (DNA-directed RNA polymerase I, II, and III subunit RPABC1 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y6Z7_9STRA) HSP 1 Score: 239 bits (610), Expect = 3.530e-76 Identity = 123/209 (58.85%), Postives = 155/209 (74.16%), Query Frame = 1
Query: 1 MGDLPEDAIKLFRIRKTCLKMLKRRGYLVPEHELTWNTEQFSEKYGSNPLRREVTILVERPEDDKDRLFVFFPEEEKVGVKPIRAYAERMGEENVNAAIIVVKGGITPFARTAIGELCAQRHVSIEDFKDAELMVDITEHVLVPEHKASLHLQPKTELLKRYKLKDAQLPRILLTDPVARYYGLKKGQVVKIIRPSETAGRYVTYRLCI 627
M +L +A +L+R+RKT +KML R Y+V E+EL E F ++G NP R +TILVE+ +D D LFVFFPE+ KVGVKPIR Y RM +ENV AI+VV+ GITPFAR A+ E+ A R+ IE FK+ EL+VDITEH LVP H+ L K LLKRY+++D+QLPR+ +TDP+ARYYG+ +GQVVKIIRPSETAGRYVTYR I
Sbjct: 72 MSELTPEASRLYRVRKTTVKMLHNRDYIVSENELVMTPEAFQTQFGDNPTREMMTILVEKMDDPSDNLFVFFPEDTKVGVKPIRNYCNRMKDENVTKAILVVQEGITPFARQALNEM-APRY-KIEHFKETELLVDITEHTLVPVHRV-LGRDEKAALLKRYRIRDSQLPRMQVTDPIARYYGMTRGQVVKIIRPSETAGRYVTYRAVI 277
BLAST of mRNA_P-wetherbeei_contig6347.2.1 vs. uniprot
Match: A0A067CT03_SAPPC (Uncharacterized protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CT03_SAPPC) HSP 1 Score: 235 bits (599), Expect = 1.770e-75 Identity = 119/203 (58.62%), Postives = 155/203 (76.35%), Query Frame = 1
Query: 10 LPEDAIKLFRIRKTCLKMLKRRGYLVPEHELTWNTEQFSEKYGSNPLRREVTILVERPEDDKDRLFVFFPEEEKVGVKPIRAYAERMGEENVNAAIIVVKGGITPFARTAIGELCAQRHVSIEDFKDAELMVDITEHVLVPEHKASLHLQPKTELLKRYKLKDAQLPRILLTDPVARYYGLKKGQVVKIIRPSETAGRYVTYR 618
L +A +L+R+RKT +KML RGY+V + EL T+ F+ ++G NP R +TILVE+ +D D LFVF+P++ KVGVKPIR Y RM +ENV AI++V+ GITPFA+ A+ E+ A R+ I+ FK+ EL+VDITEH LVP HK L + K LLKRYKLKD+QLPR+ ++DP+ARYYG+ +GQVVKIIRPSETAGRYVTYR
Sbjct: 6 LNPEASRLYRVRKTVVKMLANRGYIVSDDELKRTTDGFAAQFGENPTREMMTILVEKVDDPSDNLFVFYPDDAKVGVKPIRTYCNRMKDENVTKAILIVQDGITPFAKQALNEM-APRY-KIDHFKETELLVDITEHTLVPVHKV-LTREEKIALLKRYKLKDSQLPRMQVSDPIARYYGMTRGQVVKIIRPSETAGRYVTYR 205
BLAST of mRNA_P-wetherbeei_contig6347.2.1 vs. uniprot
Match: W4GMP1_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces TaxID=100860 RepID=W4GMP1_9STRA) HSP 1 Score: 234 bits (597), Expect = 3.220e-75 Identity = 123/203 (60.59%), Postives = 151/203 (74.38%), Query Frame = 1
Query: 10 LPEDAIKLFRIRKTCLKMLKRRGYLVPEHELTWNTEQFSEKYGSNPLRREVTILVERPEDDKDRLFVFFPEEEKVGVKPIRAYAERMGEENVNAAIIVVKGGITPFARTAIGELCAQRHVSIEDFKDAELMVDITEHVLVPEHKASLHLQPKTELLKRYKLKDAQLPRILLTDPVARYYGLKKGQVVKIIRPSETAGRYVTYR 618
L +A KLFR+RKT +KML RGY+V E EL E F ++G NP R +TILVE+ +D D LFVF+PE+ KVGVKPIR Y RM +ENV AI++V+ GITPFA+ A+ E+ A R+ I+ FK+ EL+VDITEH LVP HK L + K LLKRYKLKD QLPR+ +DP+ARYYG+ +GQVVKIIRPSETAGRYVTYR
Sbjct: 3 LNPEASKLFRVRKTVVKMLHNRGYIVSEEELHRTPEGFIGQFGENPTRDTMTILVEKVDDPSDNLFVFYPEDAKVGVKPIRNYCNRMKDENVTKAILIVQDGITPFAKQALNEM-APRY-KIDHFKENELLVDITEHTLVPVHKV-LTKEEKLALLKRYKLKDTQLPRMQASDPIARYYGMSRGQVVKIIRPSETAGRYVTYR 202
BLAST of mRNA_P-wetherbeei_contig6347.2.1 vs. uniprot
Match: A0A7S1SMF5_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SMF5_9CHLO) HSP 1 Score: 233 bits (593), Expect = 1.180e-74 Identity = 115/203 (56.65%), Postives = 157/203 (77.34%), Query Frame = 1
Query: 16 EDAIKLFRIRKTCLKMLKRRGYLVPEHELTWNTEQFSEKYGSNPLRREVTILVERPEDDKDRLFVFFPEEEKVGVKPIRAYAERMGEENVNAAIIVVKGGITPFARTAIGELCAQRHVSIEDFKDAELMVDITEHVLVPEHKASLHLQPKTELLKRYKLKDAQLPRILLTDPVARYYGLKKGQVVKIIRPSETAGRYVTYRLC 624
++A KLFRIR+TCL+ML+ RGYLV E EL + E F++K+G PLR ++TILV + ED D++FVFFP+E K+GV I+ Y RM +E V+ A++V+ G +T FA+T++ ++ ++ H IE FK+ EL+V+IT+HVLVPEH+ L + K LL RYK+ D QLPRI + DPVARYYGL++GQVV+I+RPSETAGRYVTYRLC
Sbjct: 2 DNATKLFRIRRTCLQMLRDRGYLVSEAELNQSKENFTDKFGDEPLRDQLTILVCKQEDPTDQIFVFFPDEVKIGVSTIKTYFNRMKDEAVHRAVMVMPGTLTSFAKTSLQDISSKYH--IEQFKENELLVNITQHVLVPEHRL-LTAEEKRALLNRYKVSDTQLPRIQVADPVARYYGLQRGQVVRIVRPSETAGRYVTYRLC 201
BLAST of mRNA_P-wetherbeei_contig6347.2.1 vs. uniprot
Match: A0A7R9WH73_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WH73_9STRA) HSP 1 Score: 233 bits (595), Expect = 8.750e-74 Identity = 119/208 (57.21%), Postives = 153/208 (73.56%), Query Frame = 1
Query: 4 GDLPEDAIKLFRIRKTCLKMLKRRGYLVPEHELTWNTEQFSEKYGSNPLRREVTILVERPEDDKDRLFVFFPEEEKVGVKPIRAYAERMGEENVNAAIIVVKGGITPFARTAIGELCAQRHVSIEDFKDAELMVDITEHVLVPEHKASLHLQPKTELLKRYKLKDAQLPRILLTDPVARYYGLKKGQVVKIIRPSETAGRYVTYRLCI 627
G L +A +LFR+ KT ML +RGY+VP F+EK+G P R +TILVE+ +D+ ++LFVFFPE+EKVGVKPI+ Y +RM EE V+ A++V++ ITPFA+ A+ E+ IE FK+AEL+VDIT+H LVPEH+ L K ELLKRY+LK+ QLPRI DPVARYYG+K+GQVVKIIRPSETAGRYVTYR+C+
Sbjct: 82 GGLTPEASRLFRVYKTVAAMLTKRGYMVPRDMRDMTPSAFTEKFGEYPARESLTILVEKADDETNQLFVFFPEDEKVGVKPIKIYTDRMKEEAVSNAVLVLRVDITPFAKQAVQEMSDS--FRIEHFKEAELLVDITDHQLVPEHQV-LSQNEKQELLKRYRLKETQLPRIQPNDPVARYYGMKRGQVVKIIRPSETAGRYVTYRICM 286 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6347.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6347.2.1 >prot_P-wetherbeei_contig6347.2.1 ID=prot_P-wetherbeei_contig6347.2.1|Name=mRNA_P-wetherbeei_contig6347.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=210bp MGDLPEDAIKLFRIRKTCLKMLKRRGYLVPEHELTWNTEQFSEKYGSNPLback to top mRNA from alignment at P-wetherbeei_contig6347:1433..2641- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6347.2.1 ID=mRNA_P-wetherbeei_contig6347.2.1|Name=mRNA_P-wetherbeei_contig6347.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1209bp|location=Sequence derived from alignment at P-wetherbeei_contig6347:1433..2641- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6347:1433..2641- >mRNA_P-wetherbeei_contig6347.2.1 ID=mRNA_P-wetherbeei_contig6347.2.1|Name=mRNA_P-wetherbeei_contig6347.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=630bp|location=Sequence derived from alignment at P-wetherbeei_contig6347:1433..2641- (Phaeothamnion wetherbeei SAG_119_79)back to top |