prot_P-wetherbeei_contig1004.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1004.2.1
Unique Nameprot_P-wetherbeei_contig1004.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length72
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig1004.2.1 vs. uniprot
Match: A0A6H5KJI9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJI9_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 1.090e-11
Identity = 37/81 (45.68%), Postives = 45/81 (55.56%), Query Frame = 0 
Query:    1 LALDSRWRTSALQRGAVTHATLRSRWSQASRARVAEHWEDYWCHSVSPVFFGRSA---------RPRRTKEEAAVARAAAT 72
            +AL +    S L  G +TH    +RW  ASR R+   WE YWCHS+SPVFFGRS            RR +EE A A+ AAT
Sbjct:  695 IALQAAKEGSELLSGGLTHTVTSARWCPASRCRLLSTWEGYWCHSISPVFFGRSVLGRRITKDMARRRQEEEVATAQLAAT 775
[Close]
BLAST of mRNA_P-wetherbeei_contig1004.2.1 vs. uniprot
Match: D7G5G5_ECTSI (Serine/threonine-protein kinase Nek3 (NimA-related protein kinase 3) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5G5_ECTSI)

HSP 1 Score: 67.4 bits (163), Expect = 2.040e-11
Identity = 37/81 (45.68%), Postives = 45/81 (55.56%), Query Frame = 0 
Query:    1 LALDSRWRTSALQRGAVTHATLRSRWSQASRARVAEHWEDYWCHSVSPVFFGRSA---------RPRRTKEEAAVARAAAT 72
            +AL +    S L  G +TH    +RW   SR RV   WE YWCHS+SPVFFGRS            RR +E+AA A+ AAT
Sbjct:  276 IALQAAREGSELLSGGLTHTVTSARWCPTSRGRVLSTWEGYWCHSLSPVFFGRSVLGRHMTKEMARRRQEEDAAAAQLAAT 356
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1004.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KJI9_9PHAE1.090e-1145.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5G5_ECTSI2.040e-1145.68Serine/threonine-protein kinase Nek3 (NimA-related... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1004contigP-wetherbeei_contig1004:7316..7531 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1004.2.1mRNA_P-wetherbeei_contig1004.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1004 7316..7531 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1004.2.1 ID=prot_P-wetherbeei_contig1004.2.1|Name=mRNA_P-wetherbeei_contig1004.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=72bp
LALDSRWRTSALQRGAVTHATLRSRWSQASRARVAEHWEDYWCHSVSPVF
FGRSARPRRTKEEAAVARAAAT
back to top