prot_P-wetherbeei_contig9634.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig9634.2.1
Unique Nameprot_P-wetherbeei_contig9634.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length58
Homology
BLAST of mRNA_P-wetherbeei_contig9634.2.1 vs. uniprot
Match: A0A4D9D0F3_9STRA (Thioredoxin domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D0F3_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 2.240e-9
Identity = 30/52 (57.69%), Postives = 36/52 (69.23%), Query Frame = 0
Query:    1 MDLYQKIPKDLTEATEGGAFLSICAGAFMVLLFHIELYGFLVWRPETYVVLD 52
            MDLY+++P DLTE +  G  LSI AG FMV LF +EL  F+  R ET VVLD
Sbjct:   11 MDLYRRVPADLTETSTLGGLLSIVAGVFMVALFIVELISFMSHRTETMVVLD 62          
BLAST of mRNA_P-wetherbeei_contig9634.2.1 vs. uniprot
Match: A0A8C4CY22_9TELE (Endoplasmic reticulum-Golgi intermediate compartment protein n=1 Tax=Denticeps clupeoides TaxID=299321 RepID=A0A8C4CY22_9TELE)

HSP 1 Score: 52.4 bits (124), Expect = 1.270e-7
Identity = 23/41 (56.10%), Postives = 31/41 (75.61%), Query Frame = 0
Query:    1 MDLYQKIPKDLTEATEGGAFLSICAGAFMVLLFHIELYGFL 41
            +D+Y+K+PKDLT+ T  GAF+SIC   FM+ LF  EL GF+
Sbjct:   10 LDIYRKVPKDLTQPTYTGAFISICCCVFMLFLFLSELTGFI 50          
BLAST of mRNA_P-wetherbeei_contig9634.2.1 vs. uniprot
Match: UPI001924C19E (protein disulfide-isomerase 5-3-like n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=UPI001924C19E)

HSP 1 Score: 55.8 bits (133), Expect = 1.310e-7
Identity = 27/58 (46.55%), Postives = 40/58 (68.97%), Query Frame = 0
Query:    1 MDLYQKIPKDLTEATEGGAFLSICAGAFMVLLFHIELYGFLVWRPETYVVLDDVREGK 58
            +D Y+KIP+DLTEA+  GA+LSI A   MVLLF +EL  +L     T +++D+  +G+
Sbjct:   10 VDFYRKIPRDLTEASVLGAWLSIVAAVSMVLLFGMELNNYLTVSTSTSIIVDNSSDGE 67          
BLAST of mRNA_P-wetherbeei_contig9634.2.1 vs. uniprot
Match: A0A5A9NGI1_9TELE (Endoplasmic reticulum-Golgi intermediate compartment protein n=7 Tax=Clupeocephala TaxID=186625 RepID=A0A5A9NGI1_9TELE)

HSP 1 Score: 54.7 bits (130), Expect = 3.020e-7
Identity = 25/53 (47.17%), Postives = 35/53 (66.04%), Query Frame = 0
Query:    1 MDLYQKIPKDLTEATEGGAFLSICAGAFMVLLFHIELYGFLVWRPETYVVLDD 53
            +D+Y+K+PKDLT+ T  GAF+SIC   FM+ LF  EL GF+       + +DD
Sbjct:   13 LDIYRKVPKDLTQPTYTGAFISICCCIFMMFLFLSELTGFITTEIVNELYVDD 65          
BLAST of mRNA_P-wetherbeei_contig9634.2.1 vs. uniprot
Match: A0A3B3S447_9TELE (Endoplasmic reticulum-Golgi intermediate compartment protein n=11 Tax=Actinopterygii TaxID=7898 RepID=A0A3B3S447_9TELE)

HSP 1 Score: 54.7 bits (130), Expect = 3.190e-7
Identity = 25/53 (47.17%), Postives = 35/53 (66.04%), Query Frame = 0
Query:    1 MDLYQKIPKDLTEATEGGAFLSICAGAFMVLLFHIELYGFLVWRPETYVVLDD 53
            +D+Y+K+PKDLT+ T  GAF+SIC   FM+ LF  EL GF+       + +DD
Sbjct:   41 LDIYRKVPKDLTQPTYTGAFISICCCLFMLFLFLSELTGFIATEIVNELYVDD 93          
BLAST of mRNA_P-wetherbeei_contig9634.2.1 vs. uniprot
Match: D8LK23_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK23_ECTSI)

HSP 1 Score: 54.7 bits (130), Expect = 3.390e-7
Identity = 26/58 (44.83%), Postives = 38/58 (65.52%), Query Frame = 0
Query:    1 MDLYQKIPKDLTEATEGGAFLSICAGAFMVLLFHIELYGFLVWRPETYVVLDDVREGK 58
            +DLY KIP DL+++T  G + S   G  M+LLF +EL+ F+    E+ VV+D+V E K
Sbjct:  411 LDLYPKIPTDLSQSTAVGGWFSTLTGVIMLLLFQVELFSFMSAPIESQVVVDNVLETK 468          
BLAST of mRNA_P-wetherbeei_contig9634.2.1 vs. uniprot
Match: W5N2D2_LEPOC (Endoplasmic reticulum-Golgi intermediate compartment protein n=32 Tax=Euteleostomi TaxID=117571 RepID=W5N2D2_LEPOC)

HSP 1 Score: 54.3 bits (129), Expect = 4.100e-7
Identity = 25/52 (48.08%), Postives = 34/52 (65.38%), Query Frame = 0
Query:    2 DLYQKIPKDLTEATEGGAFLSICAGAFMVLLFHIELYGFLVWRPETYVVLDD 53
            D+Y+K+PKDLT+ T  GAF+SIC   FM+ LF  EL GF+       + +DD
Sbjct:    9 DIYRKVPKDLTQPTYTGAFISICCCVFMLFLFLSELTGFIATEIVNELYVDD 60          
BLAST of mRNA_P-wetherbeei_contig9634.2.1 vs. uniprot
Match: ERGI1_DANRE (Endoplasmic reticulum-Golgi intermediate compartment protein 1 n=147 Tax=Osteoglossocephalai TaxID=1489341 RepID=ERGI1_DANRE)

HSP 1 Score: 54.3 bits (129), Expect = 4.100e-7
Identity = 25/52 (48.08%), Postives = 34/52 (65.38%), Query Frame = 0
Query:    2 DLYQKIPKDLTEATEGGAFLSICAGAFMVLLFHIELYGFLVWRPETYVVLDD 53
            D+Y+K+PKDLT+ T  GAF+SIC   FM+ LF  EL GF+       + +DD
Sbjct:    9 DIYRKVPKDLTQPTYTGAFISICCCVFMLFLFLSELTGFIATEIVNELYVDD 60          
BLAST of mRNA_P-wetherbeei_contig9634.2.1 vs. uniprot
Match: A0A4W4EZH0_ELEEL (Endoplasmic reticulum-Golgi intermediate compartment protein n=5 Tax=Characiphysae TaxID=186628 RepID=A0A4W4EZH0_ELEEL)

HSP 1 Score: 54.3 bits (129), Expect = 4.270e-7
Identity = 25/52 (48.08%), Postives = 34/52 (65.38%), Query Frame = 0
Query:    2 DLYQKIPKDLTEATEGGAFLSICAGAFMVLLFHIELYGFLVWRPETYVVLDD 53
            D+Y+K+PKDLT+ T  GAF+SIC   FM+ LF  EL GF+       + +DD
Sbjct:   27 DIYRKVPKDLTQPTYTGAFISICCCVFMLFLFLSELTGFIATEIVNELYVDD 78          
BLAST of mRNA_P-wetherbeei_contig9634.2.1 vs. uniprot
Match: A0A498MW07_LABRO (Endoplasmic reticulum-Golgi intermediate compartment protein n=3 Tax=Cyprinidae TaxID=7953 RepID=A0A498MW07_LABRO)

HSP 1 Score: 54.3 bits (129), Expect = 4.300e-7
Identity = 25/52 (48.08%), Postives = 34/52 (65.38%), Query Frame = 0
Query:    2 DLYQKIPKDLTEATEGGAFLSICAGAFMVLLFHIELYGFLVWRPETYVVLDD 53
            D+Y+K+PKDLT+ T  GAF+SIC   FM+ LF  EL GF+       + +DD
Sbjct:   31 DIYRKVPKDLTQPTYTGAFISICCCVFMLFLFLSELTGFIATEIVNELYVDD 82          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9634.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4D9D0F3_9STRA2.240e-957.69Thioredoxin domain-containing protein n=2 Tax=Mono... [more]
A0A8C4CY22_9TELE1.270e-756.10Endoplasmic reticulum-Golgi intermediate compartme... [more]
UPI001924C19E1.310e-746.55protein disulfide-isomerase 5-3-like n=1 Tax=Hibis... [more]
A0A5A9NGI1_9TELE3.020e-747.17Endoplasmic reticulum-Golgi intermediate compartme... [more]
A0A3B3S447_9TELE3.190e-747.17Endoplasmic reticulum-Golgi intermediate compartme... [more]
D8LK23_ECTSI3.390e-744.83DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
W5N2D2_LEPOC4.100e-748.08Endoplasmic reticulum-Golgi intermediate compartme... [more]
ERGI1_DANRE4.100e-748.08Endoplasmic reticulum-Golgi intermediate compartme... [more]
A0A4W4EZH0_ELEEL4.270e-748.08Endoplasmic reticulum-Golgi intermediate compartme... [more]
A0A498MW07_LABRO4.300e-748.08Endoplasmic reticulum-Golgi intermediate compartme... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039542Endoplasmic reticulum vesicle transporter, N-terminalPFAMPF13850ERGIC_Ncoord: 1..54
e-value: 4.5E-10
score: 39.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9634contigP-wetherbeei_contig9634:2035..2208 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9634.2.1mRNA_P-wetherbeei_contig9634.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig9634 2029..2208 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig9634.2.1 ID=prot_P-wetherbeei_contig9634.2.1|Name=mRNA_P-wetherbeei_contig9634.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=58bp
MDLYQKIPKDLTEATEGGAFLSICAGAFMVLLFHIELYGFLVWRPETYVV
LDDVREGK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039542Erv_N