mRNA_P-wetherbeei_contig52256.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig52256.1.1 vs. uniprot
Match: A0A286U5Z1_9AGAM (Nucleotide-binding-oligomerization-domain like receptor n=1 Tax=Pyrrhoderma noxium TaxID=2282107 RepID=A0A286U5Z1_9AGAM) HSP 1 Score: 66.6 bits (161), Expect = 3.950e-11 Identity = 31/67 (46.27%), Postives = 45/67 (67.16%), Query Frame = 1
Query: 1 VAFSPDGRLMVVARGDCAEVW-SYEGRKMIGPLKGHLQDVARVAFSPDGRRLATVSRDASTRLWDVS 198
V+FSPDG + G +W + G+ +IGPL+GHL+DV VAFSP+GR +A+ S D + ++WD S
Sbjct: 532 VSFSPDGTRLASGSGSTICIWEATSGKLIIGPLEGHLRDVKCVAFSPNGRLIASRSSDNTIKIWDAS 598
BLAST of mRNA_P-wetherbeei_contig52256.1.1 vs. uniprot
Match: A0A7C9J5J0_9ACTN (Uncharacterized protein n=6 Tax=Herbidospora TaxID=28443 RepID=A0A7C9J5J0_9ACTN) HSP 1 Score: 66.2 bits (160), Expect = 5.380e-11 Identity = 35/69 (50.72%), Postives = 40/69 (57.97%), Query Frame = 1
Query: 13 PDGRLMVVARGDCAEVWSYEGRKMIGPLKGHLQDVARVAFSPDGRRLATVSRDASTRLWD-VSGFAQSP 216
PDGR + +A G EVW + R++ G L GH DV VAFSPDGR LAT D RLWD V A P
Sbjct: 875 PDGRTLALAYGANVEVWDNQTRRLTGRLGGHDGDVRAVAFSPDGRLLATGGADRVIRLWDPVKATAAGP 943
BLAST of mRNA_P-wetherbeei_contig52256.1.1 vs. uniprot
Match: A0A4V5UW76_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Herbidospora galbida TaxID=2575442 RepID=A0A4V5UW76_9ACTN) HSP 1 Score: 65.9 bits (159), Expect = 7.240e-11 Identity = 34/69 (49.28%), Postives = 40/69 (57.97%), Query Frame = 1
Query: 13 PDGRLMVVARGDCAEVWSYEGRKMIGPLKGHLQDVARVAFSPDGRRLATVSRDASTRLWD-VSGFAQSP 216
PDGR + +A G E+W + R++ G L GH DV VAFSPDGR LAT D RLWD V A P
Sbjct: 420 PDGRTLALAYGPGVELWDNQTRRLTGRLGGHDGDVRAVAFSPDGRLLATGGADRVIRLWDPVKAVAAGP 488
BLAST of mRNA_P-wetherbeei_contig52256.1.1 vs. uniprot
Match: UPI000A5FA4BF (hypothetical protein n=1 Tax=Herbidospora mongoliensis TaxID=688067 RepID=UPI000A5FA4BF) HSP 1 Score: 65.9 bits (159), Expect = 7.360e-11 Identity = 32/62 (51.61%), Postives = 37/62 (59.68%), Query Frame = 1
Query: 13 PDGRLMVVARGDCAEVWSYEGRKMIGPLKGHLQDVARVAFSPDGRRLATVSRDASTRLWDVS 198
PDGR + +A G E+W + R+ G L GH DV VAFSPDGR LAT D RLWD S
Sbjct: 877 PDGRTLALAYGSVVELWDNQTRRRTGRLGGHDGDVRAVAFSPDGRLLATGGADRVIRLWDPS 938
BLAST of mRNA_P-wetherbeei_contig52256.1.1 vs. uniprot
Match: UPI000832B4D8 (TIR domain-containing protein n=1 Tax=Nocardia xishanensis TaxID=238964 RepID=UPI000832B4D8) HSP 1 Score: 63.2 bits (152), Expect = 6.590e-10 Identity = 33/64 (51.56%), Postives = 41/64 (64.06%), Query Frame = 1
Query: 1 VAFSPDGRLMVVARGDCAEVWSYEGRKMIGPLK-GHLQDVARVAFSPDGRRLATVSRDASTRLW 189
V FSPDGR + RGD E+ + IG L GH +V +AFSPDGRR+ +VSRDA+ RLW
Sbjct: 783 VQFSPDGRRIATTRGDAIELVDAGTWQRIGELMTGHKFEVNDLAFSPDGRRIVSVSRDATVRLW 846
BLAST of mRNA_P-wetherbeei_contig52256.1.1 vs. uniprot
Match: UPI0012FB0D2E (hypothetical protein n=1 Tax=Herbidospora cretacea TaxID=28444 RepID=UPI0012FB0D2E) HSP 1 Score: 62.4 bits (150), Expect = 1.220e-9 Identity = 30/60 (50.00%), Postives = 35/60 (58.33%), Query Frame = 1
Query: 13 PDGRLMVVARGDCAEVWSYEGRKMIGPLKGHLQDVARVAFSPDGRRLATVSRDASTRLWD 192
PDGR + + G E+W + R+ G L GH DV VAFSPDGR LAT D RLWD
Sbjct: 874 PDGRTLALVYGPEVELWDNQARRRTGRLGGHDGDVRAVAFSPDGRLLATGGADRVIRLWD 933
BLAST of mRNA_P-wetherbeei_contig52256.1.1 vs. uniprot
Match: X0W063_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X0W063_9ZZZZ) HSP 1 Score: 61.6 bits (148), Expect = 1.400e-9 Identity = 32/71 (45.07%), Postives = 42/71 (59.15%), Query Frame = 1
Query: 1 VAFSPDGRLMVVARGDCAEVWSYEGRKMIGPLKGHLQDVARVAFSPDGRRLATVSRDASTRLWDVSGFAQS 213
V +SPDGR V + G +W + IG L GH + V VA SPDG+ LA+ SRD + RLWDV+ +S
Sbjct: 77 VCWSPDGRT-VASGGGTIRLWDVSSGQKIGALFGHAKLVRGVACSPDGKTLASASRDHTVRLWDVASRKES 146
BLAST of mRNA_P-wetherbeei_contig52256.1.1 vs. uniprot
Match: A0A1V6DA35_9BACT (Translocation protein TolB n=1 Tax=Planctomycetes bacterium ADurb.Bin126 TaxID=1852903 RepID=A0A1V6DA35_9BACT) HSP 1 Score: 61.6 bits (148), Expect = 2.300e-9 Identity = 29/74 (39.19%), Postives = 44/74 (59.46%), Query Frame = 1
Query: 1 VAFSPDGRLMV----VARGDCAEVWSYEGRKMIGPLKGHLQDVARVAFSPDGRRLATVSRDASTRLWDVSGFAQ 210
V SPDG+L+ + R +W+ +++ LKGH + + +AFSPDGRRLAT ++D + R+WDV Q
Sbjct: 1237 VQLSPDGKLLAAHYWLDRRLTTRIWTVPDGRLVHELKGHTKTLEDLAFSPDGRRLATSAQDGAIRIWDVDSGKQ 1310
BLAST of mRNA_P-wetherbeei_contig52256.1.1 vs. uniprot
Match: A0A2N9LVL3_9BACT (WD-40 repeat protein n=1 Tax=Candidatus Sulfopaludibacter sp. SbA3 TaxID=2043164 RepID=A0A2N9LVL3_9BACT) HSP 1 Score: 60.8 bits (146), Expect = 3.640e-9 Identity = 31/65 (47.69%), Postives = 39/65 (60.00%), Query Frame = 1
Query: 1 VAFSPDGRLMVVA-RGDCAEVWSYEGRKMIGPLKGHLQDVARVAFSPDGRRLATVSRDASTRLWD 192
VAFS DG L+ G EVW+ G ++ LKGH V +AFSPDG+ LA+ S D S R+WD
Sbjct: 113 VAFSRDGTLLAAGGSGGTVEVWTLPGNELAATLKGHSGWVTGLAFSPDGKFLASSSLDRSVRIWD 177
BLAST of mRNA_P-wetherbeei_contig52256.1.1 vs. uniprot
Match: UPI001E57FCF1 (hypothetical protein n=1 Tax=unclassified Blastopirellula TaxID=2647022 RepID=UPI001E57FCF1) HSP 1 Score: 59.7 bits (143), Expect = 1.070e-8 Identity = 35/75 (46.67%), Postives = 46/75 (61.33%), Query Frame = 1
Query: 1 VAFSPDGRLMVVARGDC-AEVWSYEGRKMIGPLKGHLQDVARVAFSPDGRRLATVSRDASTRLWDV--SGFAQSP 216
+AFS DG + D A + S++GR+ PL+ H V++V FSPD R+LAT S DA+ LWDV S AQSP
Sbjct: 197 IAFSGDGTMWASGGDDNRAILHSFDGRRTSIPLEAHWSRVSQVKFSPDSRKLATASFDATICLWDVRSSEVAQSP 271 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52256.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig52256.1.1 >prot_P-wetherbeei_contig52256.1.1 ID=prot_P-wetherbeei_contig52256.1.1|Name=mRNA_P-wetherbeei_contig52256.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=64bp MVVARGDCAEVWSYEGRKMIGPLKGHLQDVARVAFSPDGRRLATVSRDASback to top mRNA from alignment at P-wetherbeei_contig52256:1..219+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig52256.1.1 ID=mRNA_P-wetherbeei_contig52256.1.1|Name=mRNA_P-wetherbeei_contig52256.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=219bp|location=Sequence derived from alignment at P-wetherbeei_contig52256:1..219+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig52256:1..219+ >mRNA_P-wetherbeei_contig52256.1.1 ID=mRNA_P-wetherbeei_contig52256.1.1|Name=mRNA_P-wetherbeei_contig52256.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=192bp|location=Sequence derived from alignment at P-wetherbeei_contig52256:1..219+ (Phaeothamnion wetherbeei SAG_119_79)back to top |