prot_P-wetherbeei_contig52256.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig52256.1.1
Unique Nameprot_P-wetherbeei_contig52256.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length64
Homology
BLAST of mRNA_P-wetherbeei_contig52256.1.1 vs. uniprot
Match: A0A7C9J5J0_9ACTN (Uncharacterized protein n=6 Tax=Herbidospora TaxID=28443 RepID=A0A7C9J5J0_9ACTN)

HSP 1 Score: 57.8 bits (138), Expect = 3.590e-8
Identity = 31/64 (48.44%), Postives = 36/64 (56.25%), Query Frame = 0
Query:    1 MVVARGDCAEVWSYEGRKMIGPLKGHLQDVARVAFSPDGRRLATVSRDASTRLWD-VSGFAQSP 63
            + +A G   EVW  + R++ G L GH  DV  VAFSPDGR LAT   D   RLWD V   A  P
Sbjct:  880 LALAYGANVEVWDNQTRRLTGRLGGHDGDVRAVAFSPDGRLLATGGADRVIRLWDPVKATAAGP 943          
BLAST of mRNA_P-wetherbeei_contig52256.1.1 vs. uniprot
Match: A0A4V5UW76_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Herbidospora galbida TaxID=2575442 RepID=A0A4V5UW76_9ACTN)

HSP 1 Score: 57.4 bits (137), Expect = 4.850e-8
Identity = 30/64 (46.88%), Postives = 36/64 (56.25%), Query Frame = 0
Query:    1 MVVARGDCAEVWSYEGRKMIGPLKGHLQDVARVAFSPDGRRLATVSRDASTRLWD-VSGFAQSP 63
            + +A G   E+W  + R++ G L GH  DV  VAFSPDGR LAT   D   RLWD V   A  P
Sbjct:  425 LALAYGPGVELWDNQTRRLTGRLGGHDGDVRAVAFSPDGRLLATGGADRVIRLWDPVKAVAAGP 488          
BLAST of mRNA_P-wetherbeei_contig52256.1.1 vs. uniprot
Match: UPI000A5FA4BF (hypothetical protein n=1 Tax=Herbidospora mongoliensis TaxID=688067 RepID=UPI000A5FA4BF)

HSP 1 Score: 57.4 bits (137), Expect = 4.900e-8
Identity = 28/57 (49.12%), Postives = 33/57 (57.89%), Query Frame = 0
Query:    1 MVVARGDCAEVWSYEGRKMIGPLKGHLQDVARVAFSPDGRRLATVSRDASTRLWDVS 57
            + +A G   E+W  + R+  G L GH  DV  VAFSPDGR LAT   D   RLWD S
Sbjct:  882 LALAYGSVVELWDNQTRRRTGRLGGHDGDVRAVAFSPDGRLLATGGADRVIRLWDPS 938          
BLAST of mRNA_P-wetherbeei_contig52256.1.1 vs. uniprot
Match: UPI001BB5237B (Uncharacterized protein n=1 Tax=Saccharothrix algeriensis TaxID=173560 RepID=UPI001BB5237B)

HSP 1 Score: 52.4 bits (124), Expect = 9.750e-8
Identity = 24/36 (66.67%), Postives = 27/36 (75.00%), Query Frame = 0
Query:   22 PLKGHLQDVARVAFSPDGRRLATVSRDASTRLWDVS 57
            PL GH   V  VAFSPDGR LAT S D++TRLWD+S
Sbjct:    4 PLVGHEHSVNAVAFSPDGRVLATGSSDSATRLWDIS 39          
BLAST of mRNA_P-wetherbeei_contig52256.1.1 vs. uniprot
Match: A0A7W9KNY9_9PSEU (WD40 repeat protein/energy-coupling factor transporter ATP-binding protein EcfA2 n=1 Tax=Kutzneria kofuensis TaxID=103725 RepID=A0A7W9KNY9_9PSEU)

HSP 1 Score: 55.8 bits (133), Expect = 1.710e-7
Identity = 26/39 (66.67%), Postives = 30/39 (76.92%), Query Frame = 0
Query:   22 PLKGHLQDVARVAFSPDGRRLATVSRDASTRLWDVSGFA 60
            PLKGH Q+VA VAFSPDG+ LAT S D + RLWD+S  A
Sbjct:  612 PLKGHEQNVASVAFSPDGKLLATASFDHTARLWDLSNPA 650          
BLAST of mRNA_P-wetherbeei_contig52256.1.1 vs. uniprot
Match: X8IZL2_9AGAM (WD domain, G-beta repeat protein (Fragment) n=1 Tax=Rhizoctonia solani AG-3 Rhs1AP TaxID=1086054 RepID=X8IZL2_9AGAM)

HSP 1 Score: 52.8 bits (125), Expect = 1.800e-7
Identity = 21/41 (51.22%), Postives = 28/41 (68.29%), Query Frame = 0
Query:   16 GRKMIGPLKGHLQDVARVAFSPDGRRLATVSRDASTRLWDV 56
            G  + GPLKGH+  V  VA+SPDG  +A+ S D + R+WDV
Sbjct:    7 GDSVFGPLKGHIDGVTSVAYSPDGTYIASASEDKTIRIWDV 47          
BLAST of mRNA_P-wetherbeei_contig52256.1.1 vs. uniprot
Match: A0A286U5Z1_9AGAM (Nucleotide-binding-oligomerization-domain like receptor n=1 Tax=Pyrrhoderma noxium TaxID=2282107 RepID=A0A286U5Z1_9AGAM)

HSP 1 Score: 55.5 bits (132), Expect = 2.350e-7
Identity = 25/53 (47.17%), Postives = 37/53 (69.81%), Query Frame = 0
Query:    6 GDCAEVW-SYEGRKMIGPLKGHLQDVARVAFSPDGRRLATVSRDASTRLWDVS 57
            G    +W +  G+ +IGPL+GHL+DV  VAFSP+GR +A+ S D + ++WD S
Sbjct:  546 GSTICIWEATSGKLIIGPLEGHLRDVKCVAFSPNGRLIASRSSDNTIKIWDAS 598          
BLAST of mRNA_P-wetherbeei_contig52256.1.1 vs. uniprot
Match: M5CGE9_THACB (NACHT domain-containing protein n=1 Tax=Thanatephorus cucumeris (strain AG1-IB / isolate 7/3/14) TaxID=1108050 RepID=M5CGE9_THACB)

HSP 1 Score: 55.5 bits (132), Expect = 2.350e-7
Identity = 23/42 (54.76%), Postives = 30/42 (71.43%), Query Frame = 0
Query:   16 GRKMIGPLKGHLQDVARVAFSPDGRRLATVSRDASTRLWDVS 57
            G+ ++GPLKGH  +V  V FSPDG  +A+ SRD + R WDVS
Sbjct: 1265 GKLILGPLKGHTDNVIGVRFSPDGSHIASCSRDKTIRFWDVS 1306          
BLAST of mRNA_P-wetherbeei_contig52256.1.1 vs. uniprot
Match: A0A0B7FFN9_THACB (Putative WD repeat-containing protein alr3466 n=1 Tax=Thanatephorus cucumeris (strain AG1-IB / isolate 7/3/14) TaxID=1108050 RepID=A0A0B7FFN9_THACB)

HSP 1 Score: 55.5 bits (132), Expect = 2.350e-7
Identity = 23/42 (54.76%), Postives = 30/42 (71.43%), Query Frame = 0
Query:   16 GRKMIGPLKGHLQDVARVAFSPDGRRLATVSRDASTRLWDVS 57
            G+ ++GPLKGH  +V  V FSPDG  +A+ SRD + R WDVS
Sbjct: 1236 GKLILGPLKGHTDNVIGVRFSPDGSHIASCSRDKTIRFWDVS 1277          
BLAST of mRNA_P-wetherbeei_contig52256.1.1 vs. uniprot
Match: A0A1V6DA35_9BACT (Translocation protein TolB n=1 Tax=Planctomycetes bacterium ADurb.Bin126 TaxID=1852903 RepID=A0A1V6DA35_9BACT)

HSP 1 Score: 55.5 bits (132), Expect = 2.360e-7
Identity = 22/51 (43.14%), Postives = 34/51 (66.67%), Query Frame = 0
Query:   11 VWSYEGRKMIGPLKGHLQDVARVAFSPDGRRLATVSRDASTRLWDVSGFAQ 61
            +W+    +++  LKGH + +  +AFSPDGRRLAT ++D + R+WDV    Q
Sbjct: 1260 IWTVPDGRLVHELKGHTKTLEDLAFSPDGRRLATSAQDGAIRIWDVDSGKQ 1310          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig52256.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C9J5J0_9ACTN3.590e-848.44Uncharacterized protein n=6 Tax=Herbidospora TaxID... [more]
A0A4V5UW76_9ACTN4.850e-846.88Uncharacterized protein (Fragment) n=1 Tax=Herbido... [more]
UPI000A5FA4BF4.900e-849.12hypothetical protein n=1 Tax=Herbidospora mongolie... [more]
UPI001BB5237B9.750e-866.67Uncharacterized protein n=1 Tax=Saccharothrix alge... [more]
A0A7W9KNY9_9PSEU1.710e-766.67WD40 repeat protein/energy-coupling factor transpo... [more]
X8IZL2_9AGAM1.800e-751.22WD domain, G-beta repeat protein (Fragment) n=1 Ta... [more]
A0A286U5Z1_9AGAM2.350e-747.17Nucleotide-binding-oligomerization-domain like rec... [more]
M5CGE9_THACB2.350e-754.76NACHT domain-containing protein n=1 Tax=Thanatepho... [more]
A0A0B7FFN9_THACB2.350e-754.76Putative WD repeat-containing protein alr3466 n=1 ... [more]
A0A1V6DA35_9BACT2.360e-743.14Translocation protein TolB n=1 Tax=Planctomycetes ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 16..55
e-value: 4.1E-7
score: 39.6
IPR001680WD40 repeatPFAMPF00400WD40coord: 19..55
e-value: 5.5E-7
score: 30.2
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 23..57
score: 14.953072
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 3..61
e-value: 1.2E-14
score: 55.9
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 42..56
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 23..63
score: 13.342854
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 11..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig52256contigP-wetherbeei_contig52256:28..219 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig52256.1.1mRNA_P-wetherbeei_contig52256.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig52256 1..219 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig52256.1.1 ID=prot_P-wetherbeei_contig52256.1.1|Name=mRNA_P-wetherbeei_contig52256.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=64bp
MVVARGDCAEVWSYEGRKMIGPLKGHLQDVARVAFSPDGRRLATVSRDAS
TRLWDVSGFAQSP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR036322WD40_repeat_dom_sf