mRNA_P-wetherbeei_contig1005.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1005.2.1 vs. uniprot
Match: A0A8J2ZA64_9PROT (Ribosomal RNA large subunit methyltransferase E n=1 Tax=Caldovatus sediminis TaxID=2041189 RepID=A0A8J2ZA64_9PROT) HSP 1 Score: 202 bits (515), Expect = 1.710e-60 Identity = 118/204 (57.84%), Postives = 142/204 (69.61%), Query Frame = 1 Query: 172 SSSSKQWLARQRRDPYVKEAKRLDTRSRAAFKLRELQQRHRLLKPGGRVVDLGAAPGGWSVVAAAEVGSSGGAVMAVDLLDMVPVAGVTFIRADFTAPETQRRVREWLGGRAADCVLSDMAPCFSGDASTDHLRTLALCAEGLRFAADVLVPGGTFLGKFLKGRDEKELLEAARGGFAKVRTVKPKASRGNSAESYLLATGFKG 783 S+ S++WL RQ DPYV+ A+ RSRAAFKL EL R RLL+PG RVVDLGAAPGGW+ VAA +VG SG V+A+DLL M PV G T ++ DF ET+RRV E LGG AD VLSDMAP +G A+TDHLR +AL L FA VL PGG F+ K +G E+ LL+A R FA VR KP ASR S+E Y++ATGF+G Sbjct: 22 SAGSQRWLTRQLNDPYVRAAQAQGLRSRAAFKLLELDARFRLLRPGARVVDLGAAPGGWTQVAARKVGPSG-RVVALDLLPMEPVPGATVLQGDFREEETERRVEEALGG-PADLVLSDMAPNTTGHAATDHLRIVALAEIALGFALRVLAPGGAFVAKVFQGGAERGLLDALRRNFAAVRHAKPPASRKESSELYVVATGFRG 223
BLAST of mRNA_P-wetherbeei_contig1005.2.1 vs. uniprot
Match: UPI0019B97B4A (RlmE family RNA methyltransferase n=1 Tax=Methyloceanibacter sp. TaxID=1965321 RepID=UPI0019B97B4A) HSP 1 Score: 202 bits (515), Expect = 1.940e-60 Identity = 116/204 (56.86%), Postives = 139/204 (68.14%), Query Frame = 1 Query: 178 SSKQWLARQRRDPYVKEAKRLDTRSRAAFKLRELQQRHRLLKPGGRVVDLGAAPGGWSVVAAAEVG--SSGGAVMAVDLLDMVPVAGVTFIRADFTAPETQRRVREWLGGRAADCVLSDMAPCFSGDASTDHLRTLALCAEGLRFAADVLVPGGTFLGKFLKGRDEKELLEAARGGFAKVRTVKPKASRGNSAESYLLATGFKG 783 +S +WL RQ DPYV+EAKR RSRAAFKL E+ +HRLL+PG VVDLGAAPGGWS +AA V + G V+AVDL++M PV+GV +R D T P+ +RE LGG+AAD VLSDM +G TDHLR + L L A D+L PGGTFL K L+G KEL+ FAKVR VKPKASR SAE Y+LATGF+G Sbjct: 32 ASTRWLQRQLNDPYVEEAKRRGYRSRAAFKLVEIDDKHRLLRPGMIVVDLGAAPGGWSQIAAQRVQLMAGKGRVIAVDLVEMEPVSGVVQLRLDMTDPDAAGLIREALGGQAADVVLSDMHAPATGHKPTDHLRIMGLVEAALDLAEDILAPGGTFLAKALQGGASKELVARLNRSFAKVRHVKPKASRAESAEMYVLATGFRG 235
BLAST of mRNA_P-wetherbeei_contig1005.2.1 vs. uniprot
Match: UPI001C686E97 (RlmE family RNA methyltransferase n=1 Tax=Caldovatus sp. SYSU G05006 TaxID=2865671 RepID=UPI001C686E97) HSP 1 Score: 201 bits (511), Expect = 7.720e-60 Identity = 119/215 (55.35%), Postives = 147/215 (68.37%), Query Frame = 1 Query: 172 SSSSKQWLARQRRDPYVKEAKRLDTRSRAAFKLRELQQRHRLLKPGGRVVDLGAAPGGWSVVAAAEVGSSGGAVMAVDLLDMVPVAGVTFIRADFTAPETQRRVREWLGGRAADCVLSDMAPCFSGDASTDHLRTLALCAEGLRFAADVLVPGGTFLGKFLKGRDEKELLEAARGGFAKVRTVKPKASRGNSAESYLLATGFKGPGSSAETAGAG 816 S+ S++WLARQ DPYV+ AK RSRAAFKL EL + LL+PG RVVDLGAAPGGW+ VAA +VG +G V+A+DLL M PV G ++ DF ET+R+V E LGG A D VLSDMAP +G A+TDH+R +AL L FA VL PGG F+ K +G E+ELL A + FA VR KP ASR S+E Y++ATGF+G G+ A T G G Sbjct: 22 SAGSQRWLARQLNDPYVRAAKAQGLRSRAAFKLLELDAKFHLLRPGARVVDLGAAPGGWTQVAARKVGPAG-RVVALDLLPMEPVPGAVVLQGDFREAETERQVEEALGGEA-DLVLSDMAPNTTGHAATDHMRIMALAELALDFALRVLAPGGAFVAKVFQGGAERELLAALKRNFAAVRHAKPPASRKESSELYVVATGFRG-GAGARTGGEG 233
BLAST of mRNA_P-wetherbeei_contig1005.2.1 vs. uniprot
Match: UPI0019B45982 (RlmE family RNA methyltransferase n=1 Tax=Chitinophagales bacterium TaxID=2448779 RepID=UPI0019B45982) HSP 1 Score: 200 bits (509), Expect = 1.640e-59 Identity = 116/204 (56.86%), Postives = 136/204 (66.67%), Query Frame = 1 Query: 178 SSKQWLARQRRDPYVKEAKRLDTRSRAAFKLRELQQRHRLLKPGGRVVDLGAAPGGWSVVAAAEVGSSGG--AVMAVDLLDMVPVAGVTFIRADFTAPETQRRVREWLGGRAADCVLSDMAPCFSGDASTDHLRTLALCAEGLRFAADVLVPGGTFLGKFLKGRDEKELLEAARGGFAKVRTVKPKASRGNSAESYLLATGFKG 783 SSK WL RQ DPYV AKR RSRAA+KL EL ++R+LKPG VVDLGAAPGGWS VAA V + GG AV+A+DL ++ + GV I DF +Q + L GR AD VLSDMA SG TDHLR + LC E L FAADVL P G FL K L+G E+ LL+A + F VR VKPKASR +SAE Y+LATGF+G Sbjct: 33 SSKLWLQRQLNDPYVSAAKRDGFRSRAAYKLSELDDKYRILKPGQVVVDLGAAPGGWSQVAATRVKAEGGNGAVIAIDLTEIAAIPGVVIIHGDFLEEASQGTLTALLAGRRADVVLSDMAAPSSGHRQTDHLRIMGLCEEALAFAADVLAPDGMFLAKVLQGGAEQALLDALKRDFKLVRHVKPKASRADSAELYVLATGFRG 236
BLAST of mRNA_P-wetherbeei_contig1005.2.1 vs. uniprot
Match: A0A160PKH2_9HYPH (Ribosomal RNA large subunit methyltransferase E n=12 Tax=Methylobacteriaceae TaxID=119045 RepID=A0A160PKH2_9HYPH) HSP 1 Score: 199 bits (507), Expect = 2.890e-59 Identity = 114/203 (56.16%), Postives = 136/203 (67.00%), Query Frame = 1 Query: 178 SSKQWLARQRRDPYVKEAKRLDTRSRAAFKLRELQQRHRLLKPGGRVVDLGAAPGGWSVVAAAEVGSSGGAVMAVDLLDMVPVAGVTFIRADFTAPETQRRVREWLGGRAADCVLSDMAPCFSGDASTDHLRTLALCAEGLRFAADVLVPGGTFLGKFLKGRDEKELLEAARGGFAKVRTVKPKASRGNSAESYLLATGFKGP 786 S K+WL RQ DPYV AKR RSRAAFKL E+ +R +LLKPG R+VDLGAAPGGWS VAA VG SG ++ +DLLD+ P+AG TFI DF R+ E LGG+A D VLSDMA +G TDHLRT+ L FAA++L PGG FL K +G E LL + FA VR VKP ASR +S+E Y+LATGF+GP Sbjct: 28 SQKRWLERQLNDPYVARAKREGYRSRAAFKLIEIDERFKLLKPGQRIVDLGAAPGGWSQVAAKIVGESG-RIVGIDLLDVEPMAGATFITLDFLDDSAPERLTELLGGKA-DLVLSDMAANTTGHKKTDHLRTIGLAESAAAFAAEILAPGGAFLAKVFQGGTEGSLLADLKRDFAVVRHVKPAASRADSSELYVLATGFRGP 228
BLAST of mRNA_P-wetherbeei_contig1005.2.1 vs. uniprot
Match: A0A7W0XJ28_9HYPH (Ribosomal RNA large subunit methyltransferase E n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7W0XJ28_9HYPH) HSP 1 Score: 199 bits (506), Expect = 3.190e-59 Identity = 112/204 (54.90%), Postives = 139/204 (68.14%), Query Frame = 1 Query: 178 SSKQWLARQRRDPYVKEAKRLDTRSRAAFKLRELQQRHRLLKPGGRVVDLGAAPGGWSVVAAAEVGSSGG--AVMAVDLLDMVPVAGVTFIRADFTAPETQRRVREWLGGRAADCVLSDMAPCFSGDASTDHLRTLALCAEGLRFAADVLVPGGTFLGKFLKGRDEKELLEAARGGFAKVRTVKPKASRGNSAESYLLATGFKG 783 SS++WL RQ DPYV +K+ RSRAA+KL E+ +R +LLK G RVVDLGAAPGGWS VAAA +G++ V+A+D LDM P+ GV ++ADF PE +RE LGG AD +LSDMA +G +TDHLR +ALC F+ DVL PGGTFL K +G E LL A + F KV+ VKP ASR +S E YLLATGF+G Sbjct: 25 SSQRWLERQLNDPYVARSKQEGYRSRAAYKLLEIDERFKLLKSGRRVVDLGAAPGGWSQVAAARIGATDADPRVVAIDYLDMDPLPGVRILKADFLDPEAPALIREALGGHKADLLLSDMAAPTTGHRATDHLRIVALCEAAADFSRDVLAPGGTFLAKVFRGGTENVLLAALKRDFTKVQHVKPPASRPDSPELYLLATGFRG 228
BLAST of mRNA_P-wetherbeei_contig1005.2.1 vs. uniprot
Match: A0A4R3LVE0_9HYPH (Ribosomal RNA large subunit methyltransferase E n=1 Tax=Tepidamorphus gemmatus TaxID=747076 RepID=A0A4R3LVE0_9HYPH) HSP 1 Score: 199 bits (507), Expect = 3.370e-59 Identity = 117/212 (55.19%), Postives = 139/212 (65.57%), Query Frame = 1 Query: 160 SRSVSSSSKQWLARQRRDPYVKEAKRLDTRSRAAFKLRELQQRHRLLKPGGRVVDLGAAPGGWSVVAAAEVGSSGGA--VMAVDLLDMVPVAGVTFIRADFTAPETQRRVREWLGGRAADCVLSDMAPCFSGDASTDHLRTLALCAEGLRFAADVLVPGGTFLGKFLKGRDEKELLEAARGGFAKVRTVKPKASRGNSAESYLLATGFKGPG 789 +R S+SS +WL RQ DPYV++A+ RSRAA+KL EL R LLKPG RVVDLGAAPGGWS V AA VGS GG V+A+D+L+M + GV + DF R+ LGG AD VLSDMAP +G TDH+R +ALC L FA VLVPGG FL K L+G E LL + FA VR VKP ASR +SAE Y+LATGF+G G Sbjct: 20 ARRRSTSSTRWLERQLNDPYVEKARAEGYRSRAAYKLIELDDRFHLLKPGARVVDLGAAPGGWSQVVAARVGSPGGKGRVVAIDILEMAAIPGVEVLHLDFLDAAAPERLTAALGG-PADVVLSDMAPATTGHRQTDHMRIMALCEAALEFARQVLVPGGAFLAKVLRGGTEGALLADMKRDFAAVRHVKPPASRADSAELYVLATGFRGKG 230
BLAST of mRNA_P-wetherbeei_contig1005.2.1 vs. uniprot
Match: V5SBJ2_9HYPH (Ribosomal RNA large subunit methyltransferase E n=2 Tax=Hyphomicrobium TaxID=81 RepID=V5SBJ2_9HYPH) HSP 1 Score: 200 bits (509), Expect = 3.620e-59 Identity = 116/212 (54.72%), Postives = 142/212 (66.98%), Query Frame = 1 Query: 160 SRSVSSSSKQWLARQRRDPYVKEAKRLDTRSRAAFKLRELQQRHRLLKPGGRVVDLGAAPGGWSVVAAAEVGSSGGA--VMAVDLLDMVPVAGVTFIRADFTAPETQRRVREWLGGRAADCVLSDMAPCFSGDASTDHLRTLALCAEGLRFAADVLVPGGTFLGKFLKGRDEKELLEAARGGFAKVRTVKPKASRGNSAESYLLATGFKGPG 789 +RS ++SS++WL RQ DPYV +KR RSRAAFKL E+ ++R LKPG R+VDLGAAPGGWS +AA VGS GG V+A+D L+M P+AGV DFT PE + +R L AAD VLSDMA G + TDHLR + L FA DVL PGGTFL K +G E++LL+ + F VR VKP ASR +SAE Y+LATGFKG G Sbjct: 57 ARSRTASSQRWLERQLNDPYVAASKREGYRSRAAFKLIEIDDKYRFLKPGQRIVDLGAAPGGWSQIAAERVGSIGGKGQVVAIDYLEMEPLAGVEHAMIDFTDPEAEPWIRGKLRDGAADAVLSDMAAPTVGHSRTDHLRIMGLAEAAAHFAGDVLAPGGTFLCKVFQGGTERDLLDFLKQRFQTVRHVKPPASRADSAELYVLATGFKGRG 268
BLAST of mRNA_P-wetherbeei_contig1005.2.1 vs. uniprot
Match: A0A3M1J730_9PROT (Ribosomal RNA large subunit methyltransferase E n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M1J730_9PROT) HSP 1 Score: 199 bits (505), Expect = 5.260e-59 Identity = 114/205 (55.61%), Postives = 136/205 (66.34%), Query Frame = 1 Query: 178 SSKQWLARQRRDPYVKEAKRLDTRSRAAFKLRELQQRHRLLKPGGRVVDLGAAPGGWSVVAAAEVGSSG--GAVMAVDLLDMVPVAGVTFIRADFTAPETQRRVREWLGGRAADCVLSDMAPCFSGDASTDHLRTLALCAEGLRFAADVLVPGGTFLGKFLKGRDEKELLEAARGGFAKVRTVKPKASRGNSAESYLLATGFKGP 786 SS +WL RQ DPYV A+ RSRAAFKL E+ +++ LLKPG RVVDLGAAPGGWS VAA V G G V+AVD+ +M P+ GV IR DF P +RVRE L G AD VLSDMA +G TDHLR + LC L FA +VL PGG FL K L+G E++LL + F VR VKP+ASR +SAE Y+LA GF+GP Sbjct: 28 SSTRWLQRQLNDPYVARAREEGYRSRAAFKLLEIDRKYGLLKPGMRVVDLGAAPGGWSQVAARAVSPEGQEGMVVAVDISEMEPLPGVEVIRLDFLEPGAPQRVREALEGGLADAVLSDMAAPATGHRQTDHLRIIGLCEAALDFAEEVLAPGGAFLAKVLQGGTERDLLNRLKVNFTSVRHVKPEASRADSAELYVLAQGFRGP 232
BLAST of mRNA_P-wetherbeei_contig1005.2.1 vs. uniprot
Match: A0A6L5FR64_9HYPH (Ribosomal RNA large subunit methyltransferase E n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FR64_9HYPH) HSP 1 Score: 199 bits (507), Expect = 6.210e-59 Identity = 113/205 (55.12%), Postives = 139/205 (67.80%), Query Frame = 1 Query: 172 SSSSKQWLARQRRDPYVKEAKRLDTRSRAAFKLRELQQRHRLLKPGGRVVDLGAAPGGWSVVAAAEVGSSGGA--VMAVDLLDMVPVAGVTFIRADFTAPETQRRVREWLGGRAADCVLSDMAPCFSGDASTDHLRTLALCAEGLRFAADVLVPGGTFLGKFLKGRDEKELLEAARGGFAKVRTVKPKASRGNSAESYLLATGFK 780 S+SS+ WL RQ DPYV AKR RSRAA+KL E+ +HR+LKPGGRVVDLGAAPGGWS +AA VG+ G V+A+D+LD+ P++GVTF+ DF P R++ LGG AD VLSDMA +G TDHL+ +AL FA +VL PGG L K L+G E LL A + FA V+ VKP ASR +SAE YLLATGF+ Sbjct: 58 SASSRAWLERQLNDPYVARAKREGYRSRAAYKLTEIDDKHRILKPGGRVVDLGAAPGGWSQIAARRVGADAGKGRVVAIDILDIPPISGVTFLHLDFLDPSAPERLKAALGG-PADVVLSDMAANATGHRKTDHLKIMALVEAAGDFACEVLGPGGALLAKVLQGGTEASLLAALKQRFASVKHVKPAASRADSAERYLLATGFR 261 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1005.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1005.2.1 >prot_P-wetherbeei_contig1005.2.1 ID=prot_P-wetherbeei_contig1005.2.1|Name=mRNA_P-wetherbeei_contig1005.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=284bp MCEPSRRFAWTTFSRSVSSSSKQWLARQRRDPYVKEAKRLDTRSRAAFKLback to top mRNA from alignment at P-wetherbeei_contig1005:3950..5409- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1005.2.1 ID=mRNA_P-wetherbeei_contig1005.2.1|Name=mRNA_P-wetherbeei_contig1005.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1460bp|location=Sequence derived from alignment at P-wetherbeei_contig1005:3950..5409- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1005:3950..5409- >mRNA_P-wetherbeei_contig1005.2.1 ID=mRNA_P-wetherbeei_contig1005.2.1|Name=mRNA_P-wetherbeei_contig1005.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=852bp|location=Sequence derived from alignment at P-wetherbeei_contig1005:3950..5409- (Phaeothamnion wetherbeei SAG_119_79)back to top |