prot_P-wetherbeei_contig1005.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1005.2.1
Unique Nameprot_P-wetherbeei_contig1005.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length284
Homology
BLAST of mRNA_P-wetherbeei_contig1005.2.1 vs. uniprot
Match: A0A8J2ZA64_9PROT (Ribosomal RNA large subunit methyltransferase E n=1 Tax=Caldovatus sediminis TaxID=2041189 RepID=A0A8J2ZA64_9PROT)

HSP 1 Score: 203 bits (516), Expect = 2.220e-61
Identity = 118/204 (57.84%), Postives = 142/204 (69.61%), Query Frame = 0
Query:   18 SSSSKQWLARQRRDPYVKEAKRLDTRSRAAFKLRELQQRHRLLKPGGRVVDLGAAPGGWSVVAAAEVGSSGGAVMAVDLLDMVPVAGVTFIRADFTAPETQRRVREWLGGRAADCVLSDMAPCFSGDASTDHLRTLALCAEGLRFAADVLVPGGTFLGKFLKGRDEKELLEAARGGFAKVRTVKPKASRGNSAESYLLATGFKG 221
            S+ S++WL RQ  DPYV+ A+    RSRAAFKL EL  R RLL+PG RVVDLGAAPGGW+ VAA +VG SG  V+A+DLL M PV G T ++ DF   ET+RRV E LGG  AD VLSDMAP  +G A+TDHLR +AL    L FA  VL PGG F+ K  +G  E+ LL+A R  FA VR  KP ASR  S+E Y++ATGF+G
Sbjct:   22 SAGSQRWLTRQLNDPYVRAAQAQGLRSRAAFKLLELDARFRLLRPGARVVDLGAAPGGWTQVAARKVGPSG-RVVALDLLPMEPVPGATVLQGDFREEETERRVEEALGG-PADLVLSDMAPNTTGHAATDHLRIVALAEIALGFALRVLAPGGAFVAKVFQGGAERGLLDALRRNFAAVRHAKPPASRKESSELYVVATGFRG 223          
BLAST of mRNA_P-wetherbeei_contig1005.2.1 vs. uniprot
Match: UPI0019B97B4A (RlmE family RNA methyltransferase n=1 Tax=Methyloceanibacter sp. TaxID=1965321 RepID=UPI0019B97B4A)

HSP 1 Score: 202 bits (515), Expect = 3.560e-61
Identity = 118/213 (55.40%), Postives = 143/213 (67.14%), Query Frame = 0
Query:   11 TTFSRSVSSSSKQWLARQRRDPYVKEAKRLDTRSRAAFKLRELQQRHRLLKPGGRVVDLGAAPGGWSVVAAAEVG--SSGGAVMAVDLLDMVPVAGVTFIRADFTAPETQRRVREWLGGRAADCVLSDMAPCFSGDASTDHLRTLALCAEGLRFAADVLVPGGTFLGKFLKGRDEKELLEAARGGFAKVRTVKPKASRGNSAESYLLATGFKG 221
            T   R ++S+  +WL RQ  DPYV+EAKR   RSRAAFKL E+  +HRLL+PG  VVDLGAAPGGWS +AA  V   +  G V+AVDL++M PV+GV  +R D T P+    +RE LGG+AAD VLSDM    +G   TDHLR + L    L  A D+L PGGTFL K L+G   KEL+      FAKVR VKPKASR  SAE Y+LATGF+G
Sbjct:   25 TAKGRKIAST--RWLQRQLNDPYVEEAKRRGYRSRAAFKLVEIDDKHRLLRPGMIVVDLGAAPGGWSQIAAQRVQLMAGKGRVIAVDLVEMEPVSGVVQLRLDMTDPDAAGLIREALGGQAADVVLSDMHAPATGHKPTDHLRIMGLVEAALDLAEDILAPGGTFLAKALQGGASKELVARLNRSFAKVRHVKPKASRAESAEMYVLATGFRG 235          
BLAST of mRNA_P-wetherbeei_contig1005.2.1 vs. uniprot
Match: UPI001C686E97 (RlmE family RNA methyltransferase n=1 Tax=Caldovatus sp. SYSU G05006 TaxID=2865671 RepID=UPI001C686E97)

HSP 1 Score: 201 bits (512), Expect = 1.010e-60
Identity = 119/215 (55.35%), Postives = 147/215 (68.37%), Query Frame = 0
Query:   18 SSSSKQWLARQRRDPYVKEAKRLDTRSRAAFKLRELQQRHRLLKPGGRVVDLGAAPGGWSVVAAAEVGSSGGAVMAVDLLDMVPVAGVTFIRADFTAPETQRRVREWLGGRAADCVLSDMAPCFSGDASTDHLRTLALCAEGLRFAADVLVPGGTFLGKFLKGRDEKELLEAARGGFAKVRTVKPKASRGNSAESYLLATGFKGPGSSAETAGAG 232
            S+ S++WLARQ  DPYV+ AK    RSRAAFKL EL  +  LL+PG RVVDLGAAPGGW+ VAA +VG +G  V+A+DLL M PV G   ++ DF   ET+R+V E LGG A D VLSDMAP  +G A+TDH+R +AL    L FA  VL PGG F+ K  +G  E+ELL A +  FA VR  KP ASR  S+E Y++ATGF+G G+ A T G G
Sbjct:   22 SAGSQRWLARQLNDPYVRAAKAQGLRSRAAFKLLELDAKFHLLRPGARVVDLGAAPGGWTQVAARKVGPAG-RVVALDLLPMEPVPGAVVLQGDFREAETERQVEEALGGEA-DLVLSDMAPNTTGHAATDHMRIMALAELALDFALRVLAPGGAFVAKVFQGGAERELLAALKRNFAAVRHAKPPASRKESSELYVVATGFRG-GAGARTGGEG 233          
BLAST of mRNA_P-wetherbeei_contig1005.2.1 vs. uniprot
Match: UPI0019B45982 (RlmE family RNA methyltransferase n=1 Tax=Chitinophagales bacterium TaxID=2448779 RepID=UPI0019B45982)

HSP 1 Score: 200 bits (509), Expect = 3.040e-60
Identity = 116/204 (56.86%), Postives = 136/204 (66.67%), Query Frame = 0
Query:   20 SSKQWLARQRRDPYVKEAKRLDTRSRAAFKLRELQQRHRLLKPGGRVVDLGAAPGGWSVVAAAEVGSSGG--AVMAVDLLDMVPVAGVTFIRADFTAPETQRRVREWLGGRAADCVLSDMAPCFSGDASTDHLRTLALCAEGLRFAADVLVPGGTFLGKFLKGRDEKELLEAARGGFAKVRTVKPKASRGNSAESYLLATGFKG 221
            SSK WL RQ  DPYV  AKR   RSRAA+KL EL  ++R+LKPG  VVDLGAAPGGWS VAA  V + GG  AV+A+DL ++  + GV  I  DF    +Q  +   L GR AD VLSDMA   SG   TDHLR + LC E L FAADVL P G FL K L+G  E+ LL+A +  F  VR VKPKASR +SAE Y+LATGF+G
Sbjct:   33 SSKLWLQRQLNDPYVSAAKRDGFRSRAAYKLSELDDKYRILKPGQVVVDLGAAPGGWSQVAATRVKAEGGNGAVIAIDLTEIAAIPGVVIIHGDFLEEASQGTLTALLAGRRADVVLSDMAAPSSGHRQTDHLRIMGLCEEALAFAADVLAPDGMFLAKVLQGGAEQALLDALKRDFKLVRHVKPKASRADSAELYVLATGFRG 236          
BLAST of mRNA_P-wetherbeei_contig1005.2.1 vs. uniprot
Match: A0A160PKH2_9HYPH (Ribosomal RNA large subunit methyltransferase E n=12 Tax=Methylobacteriaceae TaxID=119045 RepID=A0A160PKH2_9HYPH)

HSP 1 Score: 200 bits (508), Expect = 3.800e-60
Identity = 115/208 (55.29%), Postives = 138/208 (66.35%), Query Frame = 0
Query:   15 RSVSSSSKQWLARQRRDPYVKEAKRLDTRSRAAFKLRELQQRHRLLKPGGRVVDLGAAPGGWSVVAAAEVGSSGGAVMAVDLLDMVPVAGVTFIRADFTAPETQRRVREWLGGRAADCVLSDMAPCFSGDASTDHLRTLALCAEGLRFAADVLVPGGTFLGKFLKGRDEKELLEAARGGFAKVRTVKPKASRGNSAESYLLATGFKGP 222
            R  + S K+WL RQ  DPYV  AKR   RSRAAFKL E+ +R +LLKPG R+VDLGAAPGGWS VAA  VG SG  ++ +DLLD+ P+AG TFI  DF       R+ E LGG+A D VLSDMA   +G   TDHLRT+ L      FAA++L PGG FL K  +G  E  LL   +  FA VR VKP ASR +S+E Y+LATGF+GP
Sbjct:   23 RGRTLSQKRWLERQLNDPYVARAKREGYRSRAAFKLIEIDERFKLLKPGQRIVDLGAAPGGWSQVAAKIVGESG-RIVGIDLLDVEPMAGATFITLDFLDDSAPERLTELLGGKA-DLVLSDMAANTTGHKKTDHLRTIGLAESAAAFAAEILAPGGAFLAKVFQGGTEGSLLADLKRDFAVVRHVKPAASRADSSELYVLATGFRGP 228          
BLAST of mRNA_P-wetherbeei_contig1005.2.1 vs. uniprot
Match: A0A7W0XJ28_9HYPH (Ribosomal RNA large subunit methyltransferase E n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7W0XJ28_9HYPH)

HSP 1 Score: 199 bits (507), Expect = 4.190e-60
Identity = 113/210 (53.81%), Postives = 141/210 (67.14%), Query Frame = 0
Query:   14 SRSVSSSSKQWLARQRRDPYVKEAKRLDTRSRAAFKLRELQQRHRLLKPGGRVVDLGAAPGGWSVVAAAEVGSSGG--AVMAVDLLDMVPVAGVTFIRADFTAPETQRRVREWLGGRAADCVLSDMAPCFSGDASTDHLRTLALCAEGLRFAADVLVPGGTFLGKFLKGRDEKELLEAARGGFAKVRTVKPKASRGNSAESYLLATGFKG 221
            +R    SS++WL RQ  DPYV  +K+   RSRAA+KL E+ +R +LLK G RVVDLGAAPGGWS VAAA +G++     V+A+D LDM P+ GV  ++ADF  PE    +RE LGG  AD +LSDMA   +G  +TDHLR +ALC     F+ DVL PGGTFL K  +G  E  LL A +  F KV+ VKP ASR +S E YLLATGF+G
Sbjct:   19 ARGRKVSSQRWLERQLNDPYVARSKQEGYRSRAAYKLLEIDERFKLLKSGRRVVDLGAAPGGWSQVAAARIGATDADPRVVAIDYLDMDPLPGVRILKADFLDPEAPALIREALGGHKADLLLSDMAAPTTGHRATDHLRIVALCEAAADFSRDVLAPGGTFLAKVFRGGTENVLLAALKRDFTKVQHVKPPASRPDSPELYLLATGFRG 228          
BLAST of mRNA_P-wetherbeei_contig1005.2.1 vs. uniprot
Match: A0A4R3LVE0_9HYPH (Ribosomal RNA large subunit methyltransferase E n=1 Tax=Tepidamorphus gemmatus TaxID=747076 RepID=A0A4R3LVE0_9HYPH)

HSP 1 Score: 200 bits (508), Expect = 4.430e-60
Identity = 117/212 (55.19%), Postives = 139/212 (65.57%), Query Frame = 0
Query:   14 SRSVSSSSKQWLARQRRDPYVKEAKRLDTRSRAAFKLRELQQRHRLLKPGGRVVDLGAAPGGWSVVAAAEVGSSGGA--VMAVDLLDMVPVAGVTFIRADFTAPETQRRVREWLGGRAADCVLSDMAPCFSGDASTDHLRTLALCAEGLRFAADVLVPGGTFLGKFLKGRDEKELLEAARGGFAKVRTVKPKASRGNSAESYLLATGFKGPG 223
            +R  S+SS +WL RQ  DPYV++A+    RSRAA+KL EL  R  LLKPG RVVDLGAAPGGWS V AA VGS GG   V+A+D+L+M  + GV  +  DF       R+   LGG  AD VLSDMAP  +G   TDH+R +ALC   L FA  VLVPGG FL K L+G  E  LL   +  FA VR VKP ASR +SAE Y+LATGF+G G
Sbjct:   20 ARRRSTSSTRWLERQLNDPYVEKARAEGYRSRAAYKLIELDDRFHLLKPGARVVDLGAAPGGWSQVVAARVGSPGGKGRVVAIDILEMAAIPGVEVLHLDFLDAAAPERLTAALGG-PADVVLSDMAPATTGHRQTDHMRIMALCEAALEFARQVLVPGGAFLAKVLRGGTEGALLADMKRDFAAVRHVKPPASRADSAELYVLATGFRGKG 230          
BLAST of mRNA_P-wetherbeei_contig1005.2.1 vs. uniprot
Match: V5SBJ2_9HYPH (Ribosomal RNA large subunit methyltransferase E n=2 Tax=Hyphomicrobium TaxID=81 RepID=V5SBJ2_9HYPH)

HSP 1 Score: 201 bits (510), Expect = 4.740e-60
Identity = 116/212 (54.72%), Postives = 142/212 (66.98%), Query Frame = 0
Query:   14 SRSVSSSSKQWLARQRRDPYVKEAKRLDTRSRAAFKLRELQQRHRLLKPGGRVVDLGAAPGGWSVVAAAEVGSSGGA--VMAVDLLDMVPVAGVTFIRADFTAPETQRRVREWLGGRAADCVLSDMAPCFSGDASTDHLRTLALCAEGLRFAADVLVPGGTFLGKFLKGRDEKELLEAARGGFAKVRTVKPKASRGNSAESYLLATGFKGPG 223
            +RS ++SS++WL RQ  DPYV  +KR   RSRAAFKL E+  ++R LKPG R+VDLGAAPGGWS +AA  VGS GG   V+A+D L+M P+AGV     DFT PE +  +R  L   AAD VLSDMA    G + TDHLR + L      FA DVL PGGTFL K  +G  E++LL+  +  F  VR VKP ASR +SAE Y+LATGFKG G
Sbjct:   57 ARSRTASSQRWLERQLNDPYVAASKREGYRSRAAFKLIEIDDKYRFLKPGQRIVDLGAAPGGWSQIAAERVGSIGGKGQVVAIDYLEMEPLAGVEHAMIDFTDPEAEPWIRGKLRDGAADAVLSDMAAPTVGHSRTDHLRIMGLAEAAAHFAGDVLAPGGTFLCKVFQGGTERDLLDFLKQRFQTVRHVKPPASRADSAELYVLATGFKGRG 268          
BLAST of mRNA_P-wetherbeei_contig1005.2.1 vs. uniprot
Match: A0A6L5FR64_9HYPH (Ribosomal RNA large subunit methyltransferase E n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FR64_9HYPH)

HSP 1 Score: 200 bits (508), Expect = 8.150e-60
Identity = 113/205 (55.12%), Postives = 139/205 (67.80%), Query Frame = 0
Query:   18 SSSSKQWLARQRRDPYVKEAKRLDTRSRAAFKLRELQQRHRLLKPGGRVVDLGAAPGGWSVVAAAEVGSSGGA--VMAVDLLDMVPVAGVTFIRADFTAPETQRRVREWLGGRAADCVLSDMAPCFSGDASTDHLRTLALCAEGLRFAADVLVPGGTFLGKFLKGRDEKELLEAARGGFAKVRTVKPKASRGNSAESYLLATGFK 220
            S+SS+ WL RQ  DPYV  AKR   RSRAA+KL E+  +HR+LKPGGRVVDLGAAPGGWS +AA  VG+  G   V+A+D+LD+ P++GVTF+  DF  P    R++  LGG  AD VLSDMA   +G   TDHL+ +AL      FA +VL PGG  L K L+G  E  LL A +  FA V+ VKP ASR +SAE YLLATGF+
Sbjct:   58 SASSRAWLERQLNDPYVARAKREGYRSRAAYKLTEIDDKHRILKPGGRVVDLGAAPGGWSQIAARRVGADAGKGRVVAIDILDIPPISGVTFLHLDFLDPSAPERLKAALGG-PADVVLSDMAANATGHRKTDHLKIMALVEAAGDFACEVLGPGGALLAKVLQGGTEASLLAALKQRFASVKHVKPAASRADSAERYLLATGFR 261          
BLAST of mRNA_P-wetherbeei_contig1005.2.1 vs. uniprot
Match: A0A3M1J730_9PROT (Ribosomal RNA large subunit methyltransferase E n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M1J730_9PROT)

HSP 1 Score: 199 bits (505), Expect = 9.800e-60
Identity = 114/205 (55.61%), Postives = 136/205 (66.34%), Query Frame = 0
Query:   20 SSKQWLARQRRDPYVKEAKRLDTRSRAAFKLRELQQRHRLLKPGGRVVDLGAAPGGWSVVAAAEVGSSG--GAVMAVDLLDMVPVAGVTFIRADFTAPETQRRVREWLGGRAADCVLSDMAPCFSGDASTDHLRTLALCAEGLRFAADVLVPGGTFLGKFLKGRDEKELLEAARGGFAKVRTVKPKASRGNSAESYLLATGFKGP 222
            SS +WL RQ  DPYV  A+    RSRAAFKL E+ +++ LLKPG RVVDLGAAPGGWS VAA  V   G  G V+AVD+ +M P+ GV  IR DF  P   +RVRE L G  AD VLSDMA   +G   TDHLR + LC   L FA +VL PGG FL K L+G  E++LL   +  F  VR VKP+ASR +SAE Y+LA GF+GP
Sbjct:   28 SSTRWLQRQLNDPYVARAREEGYRSRAAFKLLEIDRKYGLLKPGMRVVDLGAAPGGWSQVAARAVSPEGQEGMVVAVDISEMEPLPGVEVIRLDFLEPGAPQRVREALEGGLADAVLSDMAAPATGHRQTDHLRIIGLCEAALDFAEEVLAPGGAFLAKVLQGGTERDLLNRLKVNFTSVRHVKPEASRADSAELYVLAQGFRGP 232          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1005.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8J2ZA64_9PROT2.220e-6157.84Ribosomal RNA large subunit methyltransferase E n=... [more]
UPI0019B97B4A3.560e-6155.40RlmE family RNA methyltransferase n=1 Tax=Methyloc... [more]
UPI001C686E971.010e-6055.35RlmE family RNA methyltransferase n=1 Tax=Caldovat... [more]
UPI0019B459823.040e-6056.86RlmE family RNA methyltransferase n=1 Tax=Chitinop... [more]
A0A160PKH2_9HYPH3.800e-6055.29Ribosomal RNA large subunit methyltransferase E n=... [more]
A0A7W0XJ28_9HYPH4.190e-6053.81Ribosomal RNA large subunit methyltransferase E n=... [more]
A0A4R3LVE0_9HYPH4.430e-6055.19Ribosomal RNA large subunit methyltransferase E n=... [more]
V5SBJ2_9HYPH4.740e-6054.72Ribosomal RNA large subunit methyltransferase E n=... [more]
A0A6L5FR64_9HYPH8.150e-6055.12Ribosomal RNA large subunit methyltransferase E n=... [more]
A0A3M1J730_9PROT9.800e-6055.61Ribosomal RNA large subunit methyltransferase E n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029063S-adenosyl-L-methionine-dependent methyltransferase superfamilyGENE3D3.40.50.150Vaccinia Virus protein VP39coord: 40..226
e-value: 6.1E-55
score: 187.9
IPR029063S-adenosyl-L-methionine-dependent methyltransferase superfamilySUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 42..221
IPR002877Ribosomal RNA methyltransferase, FtsJ domainPFAMPF01728FtsJcoord: 43..219
e-value: 4.3E-52
score: 176.8
NoneNo IPR availablePIRSRPIRSR005461-1PIRSR005461-1coord: 20..221
e-value: 2.0E-67
score: 224.7
NoneNo IPR availablePIRSRPIRSR028774-2PIRSR028774-2coord: 53..79
e-value: 7.8E-4
score: 16.6
NoneNo IPR availablePANTHERPTHR10920RIBOSOMAL RNA METHYLTRANSFERASEcoord: 27..223
NoneNo IPR availableCDDcd02440AdoMet_MTasescoord: 65..180
e-value: 3.06604E-4
score: 37.4095
IPR015507Ribosomal RNA large subunit methyltransferase EHAMAPMF_01547RNA_methyltr_Ecoord: 26..220
score: 29.308071

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1005contigP-wetherbeei_contig1005:3989..5289 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1005.2.1mRNA_P-wetherbeei_contig1005.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1005 3950..5409 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1005.2.1 ID=prot_P-wetherbeei_contig1005.2.1|Name=mRNA_P-wetherbeei_contig1005.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=284bp
MCEPSRRFAWTTFSRSVSSSSKQWLARQRRDPYVKEAKRLDTRSRAAFKL
RELQQRHRLLKPGGRVVDLGAAPGGWSVVAAAEVGSSGGAVMAVDLLDMV
PVAGVTFIRADFTAPETQRRVREWLGGRAADCVLSDMAPCFSGDASTDHL
RTLALCAEGLRFAADVLVPGGTFLGKFLKGRDEKELLEAARGGFAKVRTV
KPKASRGNSAESYLLATGFKGPGSSAETAGAGMATVAGTARMGGTKGVAF
MPAAGAGSVAGRDSSKSGEICVEGGGGKAFAPR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases_sf
IPR002877RNA_MeTrfase_FtsJ_dom
IPR015507rRNA-MeTfrase_E