mRNA_P-canaliculata_contig101824.269.1 (mRNA) Pelvetia canaliculata dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_P-canaliculata_contig101824.269.1 vs. uniprot
Match: A0A6A6PIS3_9PEZI (Uncharacterized protein n=1 Tax=Neohortaea acidophila TaxID=245834 RepID=A0A6A6PIS3_9PEZI) HSP 1 Score: 53.9 bits (128), Expect = 1.360e-5 Identity = 27/53 (50.94%), Postives = 33/53 (62.26%), Query Frame = 1 Query: 277 RRALRRTCPAEGEENAVDGDVGALERDGRTWVARRAGPGGLDTTPPREGRFER 435
RR R E EN ++G + LE D R W+ RR GGL++TPPREGRFER
Sbjct: 798 RRPTHRQARHEEVENELEGHLDGLEEDRRLWMDRREVGGGLESTPPREGRFER 850 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig101824.269.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig101824.269.1 >prot_P-canaliculata_contig101824.269.1 ID=prot_P-canaliculata_contig101824.269.1|Name=mRNA_P-canaliculata_contig101824.269.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=145bp PAAPAAPPPSRPRAPSSPGAPPIKRKPVPPPPSSPPLCVYHDARPRTSVDback to top mRNA from alignment at P-canaliculata_contig101824:1..555- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig101824.269.1 ID=mRNA_P-canaliculata_contig101824.269.1|Name=mRNA_P-canaliculata_contig101824.269.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=555bp|location=Sequence derived from alignment at P-canaliculata_contig101824:1..555- (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig101824:1..555- >mRNA_P-canaliculata_contig101824.269.1 ID=mRNA_P-canaliculata_contig101824.269.1|Name=mRNA_P-canaliculata_contig101824.269.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=870bp|location=Sequence derived from alignment at P-canaliculata_contig101824:1..555- (Pelvetia canaliculata dioecious)back to top |