Homology
BLAST of mRNA_P-canaliculata_contig101628.250.1 vs. uniprot
Match:
A0A4Y7ZYW8_9GAMM (Small ribosomal subunit biogenesis GTPase RsgA n=6 Tax=Psychromonas TaxID=67572 RepID=A0A4Y7ZYW8_9GAMM)
HSP 1 Score: 601 bits (1549), Expect = 4.050e-216
Identity = 293/317 (92.43%), Postives = 306/317 (96.53%), Query Frame = 1
Query: 1 QWDESELGPKLEGLVVSRFGQHADIEDEQGKVERCTLRRSIRSLVTGDRVVWRAGKESHQGISGVIEAVHPRKTVLTRPDYYDGIKPIAANIDHIVIVSSIAPEFSRNIIDRYLVACEDIGITPIIVLNKVDLLTDETAALIGKELQSYRDIGYTVIYSSMHGDGLDNLKSVMKDKINIFVGQSGVGKTSLLNMLLPEVEAVTGEISEGSGLGKHTTTTARLYHFSDGGDLIDSPGIREFSLWHLEAERIASGFIEFREHLGNCRFRDCKHLADPGCALVEAVENGQIDNARFNSFLRILETMDDAKNARHRDPNVY 951
QWDESELGP+LEGLVVSRFGQHADIED GKVERCTLRRSIRSLVTGDRVVWRAGKESHQGISGVIEAVHPRKTVLTRPDYYDGIKPIAANIDHI+IVSSIAPEFSRNIIDRYLVACEDIGITPIIVLNK+DLL +E+A +I +ELQSYRDIGY V+YSSMHGDGLD+LKSVMKDKINIFVGQSGVGKTSLLNMLLPEVEAVTGEISEGSGLGKHTTTTARLYHFSDGGDLIDSPGIREFSLWHLEAERIASGFIEFR +LG+CRFRDCKH ADPGCALV AVE+G ID+ARFNSFLRILETMDDAKNARHRDPN Y
Sbjct: 30 QWDESELGPQLEGLVVSRFGQHADIEDNDGKVERCTLRRSIRSLVTGDRVVWRAGKESHQGISGVIEAVHPRKTVLTRPDYYDGIKPIAANIDHIIIVSSIAPEFSRNIIDRYLVACEDIGITPIIVLNKIDLLDEESAKIIDEELQSYRDIGYQVLYSSMHGDGLDSLKSVMKDKINIFVGQSGVGKTSLLNMLLPEVEAVTGEISEGSGLGKHTTTTARLYHFSDGGDLIDSPGIREFSLWHLEAERIASGFIEFRNYLGSCRFRDCKHQADPGCALVAAVEDGHIDSARFNSFLRILETMDDAKNARHRDPNTY 346
BLAST of mRNA_P-canaliculata_contig101628.250.1 vs. uniprot
Match:
UPI00037AC5C0 (small ribosomal subunit biogenesis GTPase RsgA n=2 Tax=Psychromonas TaxID=67572 RepID=UPI00037AC5C0)
HSP 1 Score: 566 bits (1460), Expect = 1.470e-202
Identity = 271/317 (85.49%), Postives = 296/317 (93.38%), Query Frame = 1
Query: 1 QWDESELGPKLEGLVVSRFGQHADIEDEQGKVERCTLRRSIRSLVTGDRVVWRAGKESHQGISGVIEAVHPRKTVLTRPDYYDGIKPIAANIDHIVIVSSIAPEFSRNIIDRYLVACEDIGITPIIVLNKVDLLTDETAALIGKELQSYRDIGYTVIYSSMHGDGLDNLKSVMKDKINIFVGQSGVGKTSLLNMLLPEVEAVTGEISEGSGLGKHTTTTARLYHFSDGGDLIDSPGIREFSLWHLEAERIASGFIEFREHLGNCRFRDCKHLADPGCALVEAVENGQIDNARFNSFLRILETMDDAKNARHRDPNVY 951
QWDESELGP+L+G+V+SRFGQHADIEDE+G +ERC LRR+++SLVTGDRVVWRAGKES+ GISGV+EAVHPRKTVLTRPDYYDGIKPIAANIDHI+IVSSIAPEFSRNIIDRYLVACEDIGITPIIVLNK DLL D++A + +ELQSYRDIGY V+YSSMHGDGLD+LK MKDKINIFVGQSGVGKTSLLN LLPEVEAVTGEISEGSGLGKHTTTTARLYHF+DGGDLIDSPGIREFSLWHLEAERIASGFIEFR+HLG CRFRDCKH DPGCALV VE G+I AR++SFLRILETMDDAKNAR+R+PN Y
Sbjct: 30 QWDESELGPQLQGIVISRFGQHADIEDEKGNIERCNLRRAVKSLVTGDRVVWRAGKESYHGISGVVEAVHPRKTVLTRPDYYDGIKPIAANIDHIIIVSSIAPEFSRNIIDRYLVACEDIGITPIIVLNKSDLLDDQSAKFVDQELQSYRDIGYKVLYSSMHGDGLDDLKGAMKDKINIFVGQSGVGKTSLLNTLLPEVEAVTGEISEGSGLGKHTTTTARLYHFADGGDLIDSPGIREFSLWHLEAERIASGFIEFRKHLGGCRFRDCKHKNDPGCALVAGVEAGEIHPARYHSFLRILETMDDAKNARNRNPNTY 346
BLAST of mRNA_P-canaliculata_contig101628.250.1 vs. uniprot
Match:
A0A2N1A4P9_9GAMM (Small ribosomal subunit biogenesis GTPase RsgA n=2 Tax=Psychromonas TaxID=67572 RepID=A0A2N1A4P9_9GAMM)
HSP 1 Score: 562 bits (1449), Expect = 6.960e-201
Identity = 270/317 (85.17%), Postives = 293/317 (92.43%), Query Frame = 1
Query: 1 QWDESELGPKLEGLVVSRFGQHADIEDEQGKVERCTLRRSIRSLVTGDRVVWRAGKESHQGISGVIEAVHPRKTVLTRPDYYDGIKPIAANIDHIVIVSSIAPEFSRNIIDRYLVACEDIGITPIIVLNKVDLLTDETAALIGKELQSYRDIGYTVIYSSMHGDGLDNLKSVMKDKINIFVGQSGVGKTSLLNMLLPEVEAVTGEISEGSGLGKHTTTTARLYHFSDGGDLIDSPGIREFSLWHLEAERIASGFIEFREHLGNCRFRDCKHLADPGCALVEAVENGQIDNARFNSFLRILETMDDAKNARHRDPNVY 951
+WDE+ELGP+L+G+V+SRFGQHADIEDE G +ERC LRR+I+SLVTGD+VVWRAG ES+ GISGV+EAVHPR TVLTRPDYYDGIKPIAANIDHI+IVSSIAP+FSRNIIDRYLVACEDIGITPIIVLNK DLL D + I ELQSYRDIGY V+YSSMHGDGLDNLK+VMKDKINIFVGQSGVGKTSLLNMLLPEVEAVTGEISEGSGLGKHTTTTARLYHF +GGDLIDSPGIREFSLWHL AERIASGFIEFR++LG CRFRDCKH ADPGCALV AVE +ID+AR+ SFLRILETMDDAKNARHRDPN Y
Sbjct: 30 EWDETELGPQLQGVVISRFGQHADIEDENGNIERCNLRRAIKSLVTGDKVVWRAGNESYHGISGVVEAVHPRTTVLTRPDYYDGIKPIAANIDHIIIVSSIAPDFSRNIIDRYLVACEDIGITPIIVLNKSDLLDDASREHIDNELQSYRDIGYNVLYSSMHGDGLDNLKAVMKDKINIFVGQSGVGKTSLLNMLLPEVEAVTGEISEGSGLGKHTTTTARLYHFPEGGDLIDSPGIREFSLWHLAAERIASGFIEFRDYLGECRFRDCKHKADPGCALVAAVEEKKIDDARYRSFLRILETMDDAKNARHRDPNTY 346
BLAST of mRNA_P-canaliculata_contig101628.250.1 vs. uniprot
Match:
M4U557_9GAMM (Small ribosomal subunit biogenesis GTPase RsgA n=1 Tax=Psychromonas sp. CNPT3 TaxID=314282 RepID=M4U557_9GAMM)
HSP 1 Score: 553 bits (1425), Expect = 3.150e-197
Identity = 262/317 (82.65%), Postives = 292/317 (92.11%), Query Frame = 1
Query: 1 QWDESELGPKLEGLVVSRFGQHADIEDEQGKVERCTLRRSIRSLVTGDRVVWRAGKESHQGISGVIEAVHPRKTVLTRPDYYDGIKPIAANIDHIVIVSSIAPEFSRNIIDRYLVACEDIGITPIIVLNKVDLLTDETAALIGKELQSYRDIGYTVIYSSMHGDGLDNLKSVMKDKINIFVGQSGVGKTSLLNMLLPEVEAVTGEISEGSGLGKHTTTTARLYHFSDGGDLIDSPGIREFSLWHLEAERIASGFIEFREHLGNCRFRDCKHLADPGCALVEAVENGQIDNARFNSFLRILETMDDAKNARHRDPNVY 951
QWDESELGPKL+G+V+SRFGQHADIEDE G +ERCTLRR++RSLVTGDRVVWRAG E++ GI+GV+EAVHPR +VLTRPDYYDGIKPIAANI I+IVSS+APEFSRNIIDRY++ACEDIGITPII LNK DLL + AA+I KELQSYRDIGY V+Y SMHGDGL++LK+VMKD+I+IFVGQSGVGKTSLLNMLLPEVEA TGEISEGSGLGKHTTTTARLYHF+DGGD+IDSPGIREFSLWHLE ERIASGF+EFRE+LG CRFRDCKH DPGCALVEAV+ G+ID AR+ SFLRILETMDDAKNARHR PN Y
Sbjct: 30 QWDESELGPKLQGVVISRFGQHADIEDEHGNIERCTLRRAVRSLVTGDRVVWRAGNEAYHGITGVVEAVHPRDSVLTRPDYYDGIKPIAANIGQIIIVSSVAPEFSRNIIDRYIIACEDIGITPIIALNKSDLLDETNAAIIDKELQSYRDIGYHVLYCSMHGDGLESLKTVMKDEISIFVGQSGVGKTSLLNMLLPEVEATTGEISEGSGLGKHTTTTARLYHFADGGDIIDSPGIREFSLWHLEPERIASGFVEFREYLGECRFRDCKHKIDPGCALVEAVQAGKIDKARYASFLRILETMDDAKNARHRAPNTY 346
BLAST of mRNA_P-canaliculata_contig101628.250.1 vs. uniprot
Match:
UPI001EE7D1C9 (small ribosomal subunit biogenesis GTPase RsgA n=1 Tax=Psychromonas antarctica TaxID=67573 RepID=UPI001EE7D1C9)
HSP 1 Score: 552 bits (1422), Expect = 9.020e-197
Identity = 265/317 (83.60%), Postives = 289/317 (91.17%), Query Frame = 1
Query: 1 QWDESELGPKLEGLVVSRFGQHADIEDEQGKVERCTLRRSIRSLVTGDRVVWRAGKESHQGISGVIEAVHPRKTVLTRPDYYDGIKPIAANIDHIVIVSSIAPEFSRNIIDRYLVACEDIGITPIIVLNKVDLLTDETAALIGKELQSYRDIGYTVIYSSMHGDGLDNLKSVMKDKINIFVGQSGVGKTSLLNMLLPEVEAVTGEISEGSGLGKHTTTTARLYHFSDGGDLIDSPGIREFSLWHLEAERIASGFIEFREHLGNCRFRDCKHLADPGCALVEAVENGQIDNARFNSFLRILETMDDAKNARHRDPNVY 951
QW+ESELGP+L+G+V+SRFGQHADIEDE+G +ERC LRR I+SLVTGDRVVWRAG E++ GISGV+EAVHPR TVLTRPDYYDGIKPIAANIDHI+IVSSIAP+FSRNIIDRYLVACEDIGITPIIVLNK DLL ++A +I KELQSYRDIGY V+YSSMHGDGL LK VMKDKINIFVGQSGVGKTSLLNMLLPEVEAVTGEISE SGLGKHTTTTARLYHF +GGDLIDSPGIREFSLWHL A+RIA+GFIEFR LG CRFRDCKH DPGCAL EAV G+ID AR++SFLRILETMDDAKNARHRDPN +
Sbjct: 30 QWEESELGPQLQGVVISRFGQHADIEDEKGNIERCNLRRGIKSLVTGDRVVWRAGNEAYHGISGVVEAVHPRSTVLTRPDYYDGIKPIAANIDHIIIVSSIAPDFSRNIIDRYLVACEDIGITPIIVLNKSDLLDKQSAVIIDKELQSYRDIGYQVLYSSMHGDGLSALKYVMKDKINIFVGQSGVGKTSLLNMLLPEVEAVTGEISEASGLGKHTTTTARLYHFPEGGDLIDSPGIREFSLWHLAADRIATGFIEFRPFLGECRFRDCKHKIDPGCALAEAVATGKIDRARYHSFLRILETMDDAKNARHRDPNTH 346
BLAST of mRNA_P-canaliculata_contig101628.250.1 vs. uniprot
Match:
A1SZV8_PSYIN (Small ribosomal subunit biogenesis GTPase RsgA n=2 Tax=Psychromonas TaxID=67572 RepID=A1SZV8_PSYIN)
HSP 1 Score: 551 bits (1420), Expect = 1.890e-196
Identity = 263/317 (82.97%), Postives = 287/317 (90.54%), Query Frame = 1
Query: 1 QWDESELGPKLEGLVVSRFGQHADIEDEQGKVERCTLRRSIRSLVTGDRVVWRAGKESHQGISGVIEAVHPRKTVLTRPDYYDGIKPIAANIDHIVIVSSIAPEFSRNIIDRYLVACEDIGITPIIVLNKVDLLTDETAALIGKELQSYRDIGYTVIYSSMHGDGLDNLKSVMKDKINIFVGQSGVGKTSLLNMLLPEVEAVTGEISEGSGLGKHTTTTARLYHFSDGGDLIDSPGIREFSLWHLEAERIASGFIEFREHLGNCRFRDCKHLADPGCALVEAVENGQIDNARFNSFLRILETMDDAKNARHRDPNVY 951
QW+ESELGP+LEG+V+SRFGQHAD+EDE GK+ERC LRR ++SLVTGDRVVWRAG +++ GISGVIEAVHPR TVLTRPDYYDGIKPIAANIDHI+IVSSIAPEFSRNIIDRYL+ACEDIGITPIIVLNK DLL +++A I +ELQSYRDIGY V+YSSMHGDGL LKS MKDKINIFVGQSGVGKTSL+N+LLPE+EA T EISE SGLGKHTTTTARLYHF DGGDLIDSPGIREFSLWHLE ERIA+GFIEFR LG CRFRDCKH DPGCALV+AV GQIDNAR+ SFLRILETMDDAKNARHR PN Y
Sbjct: 30 QWNESELGPQLEGIVISRFGQHADVEDEHGKIERCNLRRGVKSLVTGDRVVWRAGNQAYHGISGVIEAVHPRTTVLTRPDYYDGIKPIAANIDHIIIVSSIAPEFSRNIIDRYLIACEDIGITPIIVLNKSDLLNEQSAKSIDQELQSYRDIGYQVLYSSMHGDGLVGLKSAMKDKINIFVGQSGVGKTSLVNLLLPEIEAATAEISENSGLGKHTTTTARLYHFPDGGDLIDSPGIREFSLWHLEPERIATGFIEFRPFLGQCRFRDCKHQIDPGCALVKAVAEGQIDNARYRSFLRILETMDDAKNARHRPPNTY 346
BLAST of mRNA_P-canaliculata_contig101628.250.1 vs. uniprot
Match:
A0A2N0X2S6_9GAMM (Small ribosomal subunit biogenesis GTPase RsgA n=1 Tax=Psychromonas sp. psych-6C06 TaxID=2058089 RepID=A0A2N0X2S6_9GAMM)
HSP 1 Score: 550 bits (1417), Expect = 5.210e-196
Identity = 265/317 (83.60%), Postives = 284/317 (89.59%), Query Frame = 1
Query: 1 QWDESELGPKLEGLVVSRFGQHADIEDEQGKVERCTLRRSIRSLVTGDRVVWRAGKESHQGISGVIEAVHPRKTVLTRPDYYDGIKPIAANIDHIVIVSSIAPEFSRNIIDRYLVACEDIGITPIIVLNKVDLLTDETAALIGKELQSYRDIGYTVIYSSMHGDGLDNLKSVMKDKINIFVGQSGVGKTSLLNMLLPEVEAVTGEISEGSGLGKHTTTTARLYHFSDGGDLIDSPGIREFSLWHLEAERIASGFIEFREHLGNCRFRDCKHLADPGCALVEAVENGQIDNARFNSFLRILETMDDAKNARHRDPNVY 951
QWDESELG +LEG+V+SRFGQHADIEDE G VERC LRR+++SLVTGD+VVWRAG ESHQGISGV+EAVHPRKTVLTRPDYYDGIKPIAANIDHI+IVSSIAPEFSRNIIDRYLVACEDIGITPIIVLNK DLL D + GY V+YSSMHGDGLD+LKSVMKDK+NIFVGQSGVGKTSLLNMLLPEVEA+TGEISEGSGLGKHTTTTARLYHF DGGDLIDSPGIREFSLWHL ERIASGFIEFREHLG CRFRDCKH DPGCALV AVE G+ID AR++SF+RILETMDDAKNARHRDPN +
Sbjct: 30 QWDESELGAQLEGVVISRFGQHADIEDENGNVERCNLRRAVKSLVTGDKVVWRAGNESHQGISGVVEAVHPRKTVLTRPDYYDGIKPIAANIDHIIIVSSIAPEFSRNIIDRYLVACEDIGITPIIVLNKSDLLDDSSXXXXXXXXXXXXXXGYNVLYSSMHGDGLDSLKSVMKDKVNIFVGQSGVGKTSLLNMLLPEVEAITGEISEGSGLGKHTTTTARLYHFPDGGDLIDSPGIREFSLWHLAPERIASGFIEFREHLGGCRFRDCKHKIDPGCALVAAVEAGKIDEARYHSFIRILETMDDAKNARHRDPNTH 346
BLAST of mRNA_P-canaliculata_contig101628.250.1 vs. uniprot
Match:
A0A0P9CIX7_9GAMM (Small ribosomal subunit biogenesis GTPase RsgA n=2 Tax=unclassified Psychromonas TaxID=2614957 RepID=A0A0P9CIX7_9GAMM)
HSP 1 Score: 545 bits (1405), Expect = 3.500e-194
Identity = 258/317 (81.39%), Postives = 287/317 (90.54%), Query Frame = 1
Query: 1 QWDESELGPKLEGLVVSRFGQHADIEDEQGKVERCTLRRSIRSLVTGDRVVWRAGKESHQGISGVIEAVHPRKTVLTRPDYYDGIKPIAANIDHIVIVSSIAPEFSRNIIDRYLVACEDIGITPIIVLNKVDLLTDETAALIGKELQSYRDIGYTVIYSSMHGDGLDNLKSVMKDKINIFVGQSGVGKTSLLNMLLPEVEAVTGEISEGSGLGKHTTTTARLYHFSDGGDLIDSPGIREFSLWHLEAERIASGFIEFREHLGNCRFRDCKHLADPGCALVEAVENGQIDNARFNSFLRILETMDDAKNARHRDPNVY 951
QWDESELGP+L+G+V+SRFGQHADIED++G +ERC LRRSI+SLVTGD VVWRAG E++ GI+G++EAVHPRKTVLTRPDYYDGIKPIA+NID I+IVSSIAP+FSRNIIDRY++ACEDIGITPII LNK DL+ D A +I KELQSYRDIGY V+Y SM GDGLD LKSVMKDK+NIFVGQSGVGKTSLL MLLPEVEA TGEISEGSGLGKHTTTTARLYHF DGGDLIDSPGIREFSLWHL+ RIA+GFIEFRE+LG CRFRDCKH DPGC LVEAV+ G+ID AR+ SF+RILETMDDAKNARHRDPN Y
Sbjct: 30 QWDESELGPQLQGVVISRFGQHADIEDDKGNIERCNLRRSIKSLVTGDCVVWRAGNEAYHGITGIVEAVHPRKTVLTRPDYYDGIKPIASNIDQIIIVSSIAPKFSRNIIDRYIIACEDIGITPIIALNKSDLIDDNNADIIDKELQSYRDIGYQVLYCSMFGDGLDGLKSVMKDKVNIFVGQSGVGKTSLLIMLLPEVEATTGEISEGSGLGKHTTTTARLYHFPDGGDLIDSPGIREFSLWHLDPARIATGFIEFREYLGTCRFRDCKHKTDPGCTLVEAVQQGKIDKARYASFIRILETMDDAKNARHRDPNTY 346
BLAST of mRNA_P-canaliculata_contig101628.250.1 vs. uniprot
Match:
A0A137SMI3_9GAMM (Small ribosomal subunit biogenesis GTPase RsgA n=12 Tax=Moritella TaxID=58050 RepID=A0A137SMI3_9GAMM)
HSP 1 Score: 431 bits (1109), Expect = 3.870e-149
Identity = 207/312 (66.35%), Postives = 248/312 (79.49%), Query Frame = 1
Query: 1 QWDESELGPKLEGLVVSRFGQHADIEDEQGKVERCTLRRSIRSLVTGDRVVWRAGKESHQGISGVIEAVHPRKTVLTRPDYYDGIKPIAANIDHIVIVSSIAPEFSRNIIDRYLVACEDIGITPIIVLNKVDLLTDETAALIGKELQSYRDIGYTVIY-SSMHGDGLDNLKSVMKDKINIFVGQSGVGKTSLLNMLLPEVEAVTGEISEGSGLGKHTTTTARLYHFSDGGDLIDSPGIREFSLWHLEAERIASGFIEFREHLGNCRFRDCKHLADPGCALVEAVENGQIDNARFNSFLRILETMDDAKNARH 933
+WD+S LG K EG+++SRFGQHAD+EDE G + RC LRRSI SLVTGDRVVWR G E QGISG+IEAVH R+TVLTRPD+YDGIKPIAANID IVIVSS+ PEFS NIIDRY+VA ED+ I P+I+LNK+DLL+ I ++LQ+YRDIGY V SS G GL L+ ++KD IFVGQSGVGK+SL+N L+PE+ G++SE SGLG HTTTTARLYHF GGDLIDSPG+REFSLWH++ E IA+GFIEFR+ LG CRFRDCKH DPGCAL +AV G+I RF++++RILETM D + RH
Sbjct: 30 EWDDSLLGKKQEGVIISRFGQHADVEDEHGVIHRCNLRRSIASLVTGDRVVWRLGNEQLQGISGIIEAVHERRTVLTRPDFYDGIKPIAANIDQIVIVSSVVPEFSTNIIDRYIVAAEDVKIRPVILLNKIDLLSPNELFTINQQLQTYRDIGYEVWQVSSTEGKGLGELQGLLKDNTTIFVGQSGVGKSSLVNALMPELHIQVGDVSEKSGLGTHTTTTARLYHFPSGGDLIDSPGVREFSLWHMKPEEIANGFIEFRDFLGECRFRDCKHKNDPGCALQDAVAKGKIKRVRFDNYVRILETMLDNRPERH 341
BLAST of mRNA_P-canaliculata_contig101628.250.1 vs. uniprot
Match:
UPI001E38566D (small ribosomal subunit biogenesis GTPase RsgA n=1 Tax=Motilimonas cestriensis TaxID=2742685 RepID=UPI001E38566D)
HSP 1 Score: 426 bits (1095), Expect = 5.390e-147
Identity = 205/311 (65.92%), Postives = 247/311 (79.42%), Query Frame = 1
Query: 1 QWDESELGPKLEGLVVSRFGQHADIEDEQGKVERCTLRRSIRSLVTGDRVVWRAGKESHQGISGVIEAVHPRKTVLTRPDYYDGIKPIAANIDHIVIVSSIAPEFSRNIIDRYLVACEDIGITPIIVLNKVDLLTDETAALIGKELQSYRDIGYTVIYSSMHG-DGLDNLKSVMKDKINIFVGQSGVGKTSLLNMLLPEVEAVTGEISEGSGLGKHTTTTARLYHFSDGGDLIDSPGIREFSLWHLEAERIASGFIEFREHLGNCRFRDCKHLADPGCALVEAVENGQIDNARFNSFLRILETMDDAKNAR 930
Q DES LG ++G+VVSRFGQHADIEDE G ++RC LRRSI+SLVTGD+VVWR G E HQG++G+IEAVHPR+TVLTRPD YDGIK IAANID I+IVS++ PEFS NIIDRYLVACE+ GI P+I+LNKVDLL + A + K LQ YRD+GY V SS H GLDN++ ++KDK IFVGQSGVGK+SL+N L+PEV A G++SE SGLG+HTTTTARLYHF GGDLIDSPGIREF+LWHLE ++I GF+E R G C+FRDCKH DPGCA+V A E+G+I R+ S+LRI + M + K R
Sbjct: 30 QLDESLLGQPIQGVVVSRFGQHADIEDEHGNIQRCNLRRSIKSLVTGDKVVWRPGNEQHQGLNGIIEAVHPRETVLTRPDVYDGIKAIAANIDQIIIVSAVLPEFSTNIIDRYLVACEETGIEPVILLNKVDLLDADAFAELDKTLQIYRDLGYDVFLSSAHEKSGLDNIQGLLKDKTTIFVGQSGVGKSSLVNALMPEVAATIGDVSENSGLGQHTTTTARLYHFPSGGDLIDSPGIREFALWHLEPQQIFDGFVELRALNGLCKFRDCKHKTDPGCAVVAAAESGKIHPMRYQSYLRITDAMAENKPTR 340
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig101628.250.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 4.05e-216 / Id = 92.43 Expect = 1.47e-202 / Id = 85.49 Expect = 6.96e-201 / Id = 85.17 Expect = 3.15e-197 / Id = 82.65 Expect = 9.02e-197 / Id = 83.60 Expect = 1.89e-196 / Id = 82.97 Expect = 5.21e-196 / Id = 83.60 Expect = 3.50e-194 / Id = 81.39 Expect = 3.87e-149 / Id = 66.35 Expect = 5.39e-147 / Id = 65.92 Sequence A0A4Y7ZYW8_9GAMM UPI00037AC5C0 A0A2N1A4P9_9GAMM M4U557_9GAMM UPI001EE7D1C9 A1SZV8_PSYIN A0A2N0X2S6_9GAMM A0A0P9CIX7_9GAMM A0A137SMI3_9GAMM UPI001E38566D Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Bacteria Seed ortholog score 565.8 Seed ortholog evalue 1.2e-158 Seed eggNOG ortholog 1278307.KB907010_gene3620 Preferred name rsgA KEGG rclass RC00002,RC00017 KEGG ko ko:K06949 KEGG Reaction R00615,R02135 KEGG Pathway ko00730,ko01100,map00730,map01100 GOs GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0022613,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0036094,GO:0042254,GO:0042274,GO:0043167,GO:0043168,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0071840,GO:0097159,GO:0097367,GO:1901265,GO:1901363 EggNOG free text desc. One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit EggNOG OGs 1MUEF@1224,1RMMB@1236,2QHWV@267894,COG1162@1,COG1162@2 EC 3.1.3.100 COG Functional cat. S BiGG Reaction iAF1260.b4161,iBWG_1329.BWG_3876,iECDH10B_1368.ECDH10B_4356,iECDH1ME8569_1439.ECDH1ME8569_4021,iEKO11_1354.EKO11_4148,iEcDH1_1363.EcDH1_3829,iEcolC_1368.EcolC_3849,iJO1366.b4161,iUMNK88_1353.UMNK88_5099,iY75_1357.Y75_RS21675 Best tax level Psychromonadaceae Best eggNOG OG NA|NA|NA BRITE ko00000,ko00001,ko01000,ko03009 Hectar predicted targeting category other localisation Exons 1 Model size 954 Cds size 954 Stop 1 Start 0
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622815589.4164674-CDS-P-canaliculata_contig101628:0..954 1622815589.4164674-CDS-P-canaliculata_contig101628:0..954 Pelvetia canaliculata dioecious CDS P-canaliculata_contig101628 1..954 + 1693494153.533547-CDS-P-canaliculata_contig101628:0..954 1693494153.533547-CDS-P-canaliculata_contig101628:0..954 Pelvetia canaliculata dioecious CDS P-canaliculata_contig101628 1..954 +
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig101628.250.1
>prot_P-canaliculata_contig101628.250.1 ID=prot_P-canaliculata_contig101628.250.1|Name=mRNA_P-canaliculata_contig101628.250.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=318bp
QWDESELGPKLEGLVVSRFGQHADIEDEQGKVERCTLRRSIRSLVTGDRV back to top mRNA from alignment at P-canaliculata_contig101628:1..954+
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig101628.250.1 ID=mRNA_P-canaliculata_contig101628.250.1|Name=mRNA_P-canaliculata_contig101628.250.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=954bp|location=Sequence derived from alignment at P-canaliculata_contig101628:1..954+ (Pelvetia canaliculata dioecious)CAATGGGATGAATCTGAACTCGGGCCAAAACTGGAAGGGTTAGTTGTTAG
TCGATTTGGTCAACATGCAGATATTGAAGATGAACAAGGTAAAGTAGAGC
GTTGTACTTTACGACGTTCAATTCGTTCTTTAGTGACTGGTGATCGTGTT
GTATGGCGAGCTGGAAAAGAATCGCATCAAGGTATCAGCGGTGTTATTGA
AGCAGTCCACCCACGAAAAACCGTATTAACTCGCCCAGATTATTACGATG
GTATTAAACCTATAGCAGCCAATATAGATCATATTGTGATTGTAAGCTCG
ATTGCGCCTGAATTTTCAAGAAATATTATTGACCGCTATTTAGTGGCCTG
TGAAGATATTGGTATCACACCGATTATTGTTCTCAACAAAGTAGATTTAT
TAACAGACGAAACGGCTGCACTGATCGGCAAAGAATTACAAAGCTACCGT
GACATTGGCTATACAGTGATTTATAGCTCAATGCATGGAGATGGTTTAGA
CAACTTAAAATCAGTGATGAAAGATAAGATAAATATTTTTGTTGGTCAGT
CTGGTGTTGGAAAAACCTCATTATTGAATATGTTATTACCTGAAGTGGAA
GCAGTAACTGGTGAGATCTCTGAAGGCTCTGGATTAGGAAAGCATACAAC
CACCACTGCTCGTCTGTATCATTTTAGCGATGGTGGTGATTTAATTGATA
GCCCTGGAATTCGTGAGTTTTCTCTATGGCACTTAGAGGCCGAACGCATA
GCTAGTGGCTTTATAGAATTTAGAGAGCATCTAGGAAATTGTCGTTTTCG
TGATTGTAAACACCTAGCGGACCCTGGTTGTGCACTAGTTGAAGCCGTTG
AAAATGGACAAATCGACAATGCCCGGTTTAATAGTTTTTTACGTATTTTG
GAAACAATGGATGATGCTAAAAATGCGCGTCATCGAGATCCTAATGTTTA
CTAA back to top Coding sequence (CDS) from alignment at P-canaliculata_contig101628:1..954+
>mRNA_P-canaliculata_contig101628.250.1 ID=mRNA_P-canaliculata_contig101628.250.1|Name=mRNA_P-canaliculata_contig101628.250.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1908bp|location=Sequence derived from alignment at P-canaliculata_contig101628:1..954+ (Pelvetia canaliculata dioecious) back to top