mRNA_P-canaliculata_contig101628.250.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score565.8
Seed ortholog evalue1.2e-158
Seed eggNOG ortholog1278307.KB907010_gene3620
Preferred namersgA
KEGG rclassRC00002,RC00017
KEGG koko:K06949
KEGG ReactionR00615,R02135
KEGG Pathwayko00730,ko01100,map00730,map01100
GOsGO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0022613,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0036094,GO:0042254,GO:0042274,GO:0043167,GO:0043168,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0071840,GO:0097159,GO:0097367,GO:1901265,GO:1901363
EggNOG free text desc.One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
EggNOG OGs1MUEF@1224,1RMMB@1236,2QHWV@267894,COG1162@1,COG1162@2
EC3.1.3.100
COG Functional cat.S
BiGG ReactioniAF1260.b4161,iBWG_1329.BWG_3876,iECDH10B_1368.ECDH10B_4356,iECDH1ME8569_1439.ECDH1ME8569_4021,iEKO11_1354.EKO11_4148,iEcDH1_1363.EcDH1_3829,iEcolC_1368.EcolC_3849,iJO1366.b4161,iUMNK88_1353.UMNK88_5099,iY75_1357.Y75_RS21675
Best tax levelPsychromonadaceae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03009
Hectar predicted targeting categoryother localisation
Exons1
Model size954
Cds size954
Stop1
Start0