Homology
BLAST of mRNA_P-canaliculata_contig10062.138.1 vs. uniprot
Match:
A0A397ACU4_9STRA (Vacuolar protein 8 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397ACU4_9STRA)
HSP 1 Score: 120 bits (301), Expect = 8.120e-31
Identity = 67/103 (65.05%), Postives = 77/103 (74.76%), Query Frame = 1
Query: 1 RQAQIVELGGLKLLLPLTQSKDVEVQRLAVHALANLSVNCEDTELLVECYNLSSVSIHLSYAANNQELMAKEGGIDMLIVMLASPHAHLQRQASKALANLGVN 309
RQ QIVEL GLKLLLPLTQSKD EVQRLA HALANLSVNC + + ++ +H Y A+NQ MA EGGIDMLI +L S + H+QRQA+KALANLGVN
Sbjct: 62 RQVQIVELDGLKLLLPLTQSKDTEVQRLAAHALANLSVNCSSHNFI--WLHSTTPHLHDYYLADNQAKMANEGGIDMLIHLLQSTNEHVQRQAAKALANLGVN 162
BLAST of mRNA_P-canaliculata_contig10062.138.1 vs. uniprot
Match:
A0A418DV07_9STRA (Vacuolar protein 8 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418DV07_9STRA)
HSP 1 Score: 120 bits (301), Expect = 1.000e-30
Identity = 67/103 (65.05%), Postives = 77/103 (74.76%), Query Frame = 1
Query: 1 RQAQIVELGGLKLLLPLTQSKDVEVQRLAVHALANLSVNCEDTELLVECYNLSSVSIHLSYAANNQELMAKEGGIDMLIVMLASPHAHLQRQASKALANLGVN 309
RQ QIVEL GLKLLLPLTQSKD EVQRLA HALANLSVNC + + ++ +H Y A+NQ MA EGGIDMLI +L S + H+QRQA+KALANLGVN
Sbjct: 62 RQVQIVELDGLKLLLPLTQSKDTEVQRLAAHALANLSVNCSSHNFI--WLHSTTPHLHDYYLADNQAKMANEGGIDMLIHLLQSTNEHVQRQAAKALANLGVN 162
BLAST of mRNA_P-canaliculata_contig10062.138.1 vs. uniprot
Match:
A0A6A5AFC1_9STRA (Vacuolar protein 8 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AFC1_9STRA)
HSP 1 Score: 120 bits (301), Expect = 3.790e-30
Identity = 67/103 (65.05%), Postives = 77/103 (74.76%), Query Frame = 1
Query: 1 RQAQIVELGGLKLLLPLTQSKDVEVQRLAVHALANLSVNCEDTELLVECYNLSSVSIHLSYAANNQELMAKEGGIDMLIVMLASPHAHLQRQASKALANLGVN 309
RQ QIVEL GLKLLLPLTQSKD EVQRLA HALANLSVNC + + ++ +H Y A+NQ MA EGGIDMLI +L S + H+QRQA+KALANLGVN
Sbjct: 43 RQVQIVELDGLKLLLPLTQSKDTEVQRLAAHALANLSVNCSSHNFI--WLHSTTPHLHDYYLADNQAKMANEGGIDMLIHLLQSTNEHVQRQAAKALANLGVN 143
BLAST of mRNA_P-canaliculata_contig10062.138.1 vs. uniprot
Match:
A0A3R6WRV7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6WRV7_9STRA)
HSP 1 Score: 98.6 bits (244), Expect = 1.560e-20
Identity = 56/91 (61.54%), Postives = 67/91 (73.63%), Query Frame = 1
Query: 37 LLLPLTQSKDVEVQRLAVHALANLSVNCEDTELLVECYNLSSVSIHLSYAANNQELMAKEGGIDMLIVMLASPHAHLQRQASKALANLGVN 309
LLLPLT+SKD EVQRLA HALANLSVNC + LV + + ++A+NQ MA EGGIDMLI +L S + H+QRQA+KALANLGVN
Sbjct: 1316 LLLPLTESKDTEVQRLAAHALANLSVNCTCSAALV-------FVVTIFHSADNQTKMANEGGIDMLIHLLQSNNEHVQRQAAKALANLGVN 1399
BLAST of mRNA_P-canaliculata_contig10062.138.1 vs. uniprot
Match:
F0WLI4_9STRA (Vacuolar protein 8 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WLI4_9STRA)
HSP 1 Score: 80.9 bits (198), Expect = 5.180e-15
Identity = 52/103 (50.49%), Postives = 65/103 (63.11%), Query Frame = 1
Query: 1 RQAQIVELGGLKLLLPLTQSKDVEVQRLAVHALANLSVNCEDTELLVECYNLSSVSIHLSYAANNQELMAKEGGIDMLIVMLASPHAHLQRQASKALANLGVN 309
RQ QIVEL GL+LLLPLT NLSVNC+ E +VE + I+L A+NQ+ MA EGGI+MLI +L S + H+QRQA+KA+ANL VN
Sbjct: 61 RQVQIVELCGLELLLPLTXXXXXXXXXXXXXXXXNLSVNCK-VEGVVEW-----LQINLYNVADNQQKMAGEGGIEMLIDLLGSSNEHVQRQAAKAIANLAVN 157
BLAST of mRNA_P-canaliculata_contig10062.138.1 vs. uniprot
Match:
A0A5D6Y1Z7_9STRA (Vacuolar protein 8 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y1Z7_9STRA)
HSP 1 Score: 69.7 bits (169), Expect = 4.880e-11
Identity = 36/40 (90.00%), Postives = 36/40 (90.00%), Query Frame = 1
Query: 1 RQAQIVELGGLKLLLPLTQSKDVEVQRLAVHALANLSVNC 120
RQ QIVEL GLKLLLPLTQSKD EVQRLA HALANLSVNC
Sbjct: 63 RQVQIVELEGLKLLLPLTQSKDTEVQRLAAHALANLSVNC 102
BLAST of mRNA_P-canaliculata_contig10062.138.1 vs. uniprot
Match:
A0A7S1TZL3_9STRA (Vacuolar protein 8 n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZL3_9STRA)
HSP 1 Score: 61.2 bits (147), Expect = 4.280e-8
Identity = 31/41 (75.61%), Postives = 36/41 (87.80%), Query Frame = 1
Query: 4 QAQIVELGGLKLLLPLTQSKDVEVQRLAVHALANLSVNCED 126
Q QIVELGGL+LLLPLT S+D +VQRL+ HALANLSVN E+
Sbjct: 26 QVQIVELGGLELLLPLTHSEDHDVQRLSAHALANLSVNAEN 66
BLAST of mRNA_P-canaliculata_contig10062.138.1 vs. uniprot
Match:
A0A7S2CFR3_9STRA (Vacuolar protein 8 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CFR3_9STRA)
HSP 1 Score: 59.7 bits (143), Expect = 1.370e-7
Identity = 31/48 (64.58%), Postives = 39/48 (81.25%), Query Frame = 1
Query: 1 RQAQIVELGGLKLLLPLTQSKDVEVQRLAVHALANLSVNCEDTELLVE 144
RQ QIV+L GL+LLLPLT+S + EVQRLA HALANLSVN ++ L+ +
Sbjct: 6 RQVQIVKLDGLQLLLPLTRSVNKEVQRLAAHALANLSVNADNQMLMAD 53
BLAST of mRNA_P-canaliculata_contig10062.138.1 vs. uniprot
Match:
A0A662X7V9_9STRA (Vacuolar protein 8 n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X7V9_9STRA)
HSP 1 Score: 60.5 bits (145), Expect = 1.770e-7
Identity = 31/44 (70.45%), Postives = 37/44 (84.09%), Query Frame = 1
Query: 13 IVELGGLKLLLPLTQSKDVEVQRLAVHALANLSVNCEDTELLVE 144
IVEL GL+LLLPLT+SKD EVQRLA HALANLSVN ++ E + +
Sbjct: 117 IVELDGLQLLLPLTKSKDTEVQRLAAHALANLSVNLDNKERIAK 160
BLAST of mRNA_P-canaliculata_contig10062.138.1 vs. uniprot
Match:
A0A812PGZ8_9DINO (Vacuolar protein 8 n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812PGZ8_9DINO)
HSP 1 Score: 57.0 bits (136), Expect = 2.200e-6
Identity = 29/39 (74.36%), Postives = 34/39 (87.18%), Query Frame = 1
Query: 1 RQAQIVELGGLKLLLPLTQSKDVEVQRLAVHALANLSVN 117
R+ QIV+LGGL+LLLPL +S D EVQRLA HALANLSV+
Sbjct: 70 RREQIVKLGGLELLLPLAESPDTEVQRLAAHALANLSVS 108
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10062.138.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 12
0 1 Expect = 8.12e-31 / Id = 65.05 Expect = 1.00e-30 / Id = 65.05 Expect = 3.79e-30 / Id = 65.05 Expect = 1.56e-20 / Id = 61.54 Expect = 5.18e-15 / Id = 50.49 Expect = 4.88e-11 / Id = 90.00 Expect = 4.28e-8 / Id = 75.61 Expect = 1.37e-7 / Id = 64.58 Expect = 1.77e-7 / Id = 70.45 Expect = 2.20e-6 / Id = 74.36 Sequence A0A397ACU4_9STRA A0A418DV07_9STRA A0A6A5AFC1_9STRA A0A3R6WRV7_9STRA F0WLI4_9STRA A0A5D6Y1Z7_9STRA A0A7S1TZL3_9STRA A0A7S2CFR3_9STRA A0A662X7V9_9STRA A0A812PGZ8_9DINO Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Seed ortholog score 80.1 Seed ortholog evalue 1.2e-12 Seed eggNOG ortholog 653948.CCA22147 GOs GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0007275,GO:0008134,GO:0008150,GO:0009791,GO:0022622,GO:0032501,GO:0032502,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0048364,GO:0048527,GO:0048528,GO:0048731,GO:0048856,GO:0090696,GO:0099402 EggNOG free text desc. Armadillo/beta-catenin-like repeat EggNOG OGs 2E3D6@1,2SAGE@2759 COG Functional cat. S Best tax level Eukaryota Best eggNOG OG NA|NA|NA Hectar predicted targeting category other localisation Exons 3 Model size 561 Cds size 561 Stop 0 Start 0
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622815580.4268982-CDS-P-canaliculata_contig10062:9658..9786 1622815580.4268982-CDS-P-canaliculata_contig10062:9658..9786 Pelvetia canaliculata dioecious CDS P-canaliculata_contig10062 9659..9786 - 1693494148.7920275-CDS-P-canaliculata_contig10062:9658..9786 1693494148.7920275-CDS-P-canaliculata_contig10062:9658..9786 Pelvetia canaliculata dioecious CDS P-canaliculata_contig10062 9659..9786 - 1622815580.4381218-CDS-P-canaliculata_contig10062:10002..10298 1622815580.4381218-CDS-P-canaliculata_contig10062:10002..10298 Pelvetia canaliculata dioecious CDS P-canaliculata_contig10062 10003..10298 - 1693494148.8059797-CDS-P-canaliculata_contig10062:10002..10298 1693494148.8059797-CDS-P-canaliculata_contig10062:10002..10298 Pelvetia canaliculata dioecious CDS P-canaliculata_contig10062 10003..10298 - 1622815580.448819-CDS-P-canaliculata_contig10062:10412..10549 1622815580.448819-CDS-P-canaliculata_contig10062:10412..10549 Pelvetia canaliculata dioecious CDS P-canaliculata_contig10062 10413..10549 - 1693494148.8144326-CDS-P-canaliculata_contig10062:10412..10549 1693494148.8144326-CDS-P-canaliculata_contig10062:10412..10549 Pelvetia canaliculata dioecious CDS P-canaliculata_contig10062 10413..10549 -
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig10062.138.1
>prot_P-canaliculata_contig10062.138.1 ID=prot_P-canaliculata_contig10062.138.1|Name=mRNA_P-canaliculata_contig10062.138.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=187bp
RQAQIVELGGLKLLLPLTQSKDVEVQRLAVHALANLSVNCEDTELLVECY back to top mRNA from alignment at P-canaliculata_contig10062:9659..10549-
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig10062.138.1 ID=mRNA_P-canaliculata_contig10062.138.1|Name=mRNA_P-canaliculata_contig10062.138.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=891bp|location=Sequence derived from alignment at P-canaliculata_contig10062:9659..10549- (Pelvetia canaliculata dioecious)AGGCAAGCGCAGATTGTGGAGCTAGGCGGGTTGAAGCTCCTTCTTCCGCT
GACGCAATCAAAAGACGTGGAGGTCCAACGTCTAGCAGTGCACGCCTTGG
CCAACCTCTCTGTGAACTGTGAGGATACAGAACTGCT GTCAGTTTTGTTT
TCATCCGTTCAACCATCAGTAGTACATACAATCGTCTGACTGTCCAACTG
TACATGAGTCATACAGGTGCTTCCGTTGCACTTTTGCCGGTTGCTTTCCA
GCGTGGAATGTTATAATCTTTCATCAGTGTCGATTCACCTTTCGTACGCA
GCAAATAACCAAGAACTCATGGCCAAGGAAGGCGGGATTGACATGCTGAT
CGTGATGCTAGCTTCTCCACATGCACACCTCCAGCGACAAGCCTCCAAAG
CATTGGCGAATCTTGGGGTCAACACCTCCAACAAGGAGAGGATATGTAAA
GCCGGCGGAGTGCCTCCTTTGGTAAGACTTGCTGGATCGAAGACTGCAGG
GGTGGCTGTGGAGGCTGTTGCTGCCCTGGCCAATTTAGCCGTCAACG GTG
AGCGACACGCACAATGCACGCCTTTGGGCTGGGGTTATGTCTTTTTTCTA
TTCTCGTGTGGTTTGAGGGGTAAAATGATCCCTATCCAAGGTAATAGTTT
TAAAACATTTTACCTGAGCTCTACCCATCTTTACTTCTGCCGTTCCCGGA
ACGGAGAGTGCTGTCTTGCTCAATGGACCATATCGTGTGCACTCTCATCA
ACTGCCCCTTCAGATGAGACTGAGATTCAAATTGTGAGAGAAGGAGGCTT
GATACCGATACTCAACGGAGCGGGCTCACGCGACGCGGAGCTTCAGTCTC
AATGTGCCCGGGCGCTGCGAAACCTCTCCGTTAACCGTGAG back to top Coding sequence (CDS) from alignment at P-canaliculata_contig10062:9659..10549-
>mRNA_P-canaliculata_contig10062.138.1 ID=mRNA_P-canaliculata_contig10062.138.1|Name=mRNA_P-canaliculata_contig10062.138.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1122bp|location=Sequence derived from alignment at P-canaliculata_contig10062:9659..10549- (Pelvetia canaliculata dioecious) back to top