prot_M-pyrifera_M_contig90263.20924.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig90263.20924.1
Unique Nameprot_M-pyrifera_M_contig90263.20924.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length121
Homology
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BLAST of mRNA_M-pyrifera_M_contig90263.20924.1 vs. uniprot
Match: A0A0L0HV40_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HV40_SPIPD)

HSP 1 Score: 57.0 bits (136), Expect = 3.260e-7
Identity = 30/88 (34.09%), Postives = 50/88 (56.82%), Query Frame = 0 
Query:    5 TAPLLLMPVVGQILACLVMSWASAWMLLTAFFTRQGLSLKWQARLIYMRFGEYMAFGVPVTIIQHIPIVSSLFVFVDVTGAALWAVDM 92
            TAPL L+P+ G IL  L+  + +AW L   +F  +G       + +      Y +FG    +++ +PI+  LF+F ++ G+ALWA+DM
Sbjct:  143 TAPLHLLPIFGTILFLLLNGYLAAWALHLHWFDLRGFGFTAGKKFVRSHRQAYTSFGSVAVLLEMVPIIGMLFMFTNIVGSALWAIDM 230
[Close]
BLAST of mRNA_M-pyrifera_M_contig90263.20924.1 vs. uniprot
Match: A0A5N5DRP8_9PEZI (Outer spore wall protein LDS1 n=4 Tax=Botryosphaeriaceae TaxID=45131 RepID=A0A5N5DRP8_9PEZI)

HSP 1 Score: 50.4 bits (119), Expect = 8.510e-5
Identity = 29/86 (33.72%), Postives = 45/86 (52.33%), Query Frame = 0 
Query:    7 PLLLMPVVGQILACLVMSWASAWMLLTAFFTRQGLSLKWQARLIYMRFGEYMAFGVPVTIIQHIPIVSSLFVFVDVTGAALWAVDM 92
            PL  +PVVG ++  ++    +       +F  +G+  + +   I  R   Y +FGVPV ++Q IP+    F F +  GAALWA DM
Sbjct:  173 PLNFIPVVGTVMFIILQGRKAGPAAHARYFQLKGMKSRQKEDFIEQRKAAYTSFGVPVVLLQLIPVAGLFFSFTNAVGAALWAADM 258
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90263.20924.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A0L0HV40_SPIPD3.260e-734.09Uncharacterized protein n=2 Tax=Spizellomyces TaxI... [more]
A0A5N5DRP8_9PEZI8.510e-533.72Outer spore wall protein LDS1 n=4 Tax=Botryosphaer... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF07264EI24coord: 4..77
e-value: 2.3E-10
score: 41.0
NoneNo IPR availablePANTHERPTHR34292FAMILY NOT NAMEDcoord: 3..94
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 13..36
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 37..56
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 103..121
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 80..84
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 85..102
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 57..79
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..12
NoneNo IPR availableTMHMMTMhelixcoord: 58..80
NoneNo IPR availableTMHMMTMhelixcoord: 15..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90263contigM-pyrifera_M_contig90263:98..460 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90263.20924.1mRNA_M-pyrifera_M_contig90263.20924.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig90263 80..460 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig90263.20924.1 ID=prot_M-pyrifera_M_contig90263.20924.1|Name=mRNA_M-pyrifera_M_contig90263.20924.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=121bp
MELLTAPLLLMPVVGQILACLVMSWASAWMLLTAFFTRQGLSLKWQARLI
YMRFGEYMAFGVPVTIIQHIPIVSSLFVFVDVTGAALWAVDMASLSNAFR
YIKVNADQQTQEILADAGLAE
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