prot_M-pyrifera_M_contig78610.18471.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig78610.18471.1
Unique Nameprot_M-pyrifera_M_contig78610.18471.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length56
Homology
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BLAST of mRNA_M-pyrifera_M_contig78610.18471.1 vs. uniprot
Match: A0A1W4WQV4_AGRPL (centrosomal protein of 164 kDa isoform X1 n=4 Tax=Agrilus planipennis TaxID=224129 RepID=A0A1W4WQV4_AGRPL)

HSP 1 Score: 50.8 bits (120), Expect = 7.150e-6
Identity = 18/31 (58.06%), Postives = 25/31 (80.65%), Query Frame = 0 
Query:   23 LPPGWQKIWDEGNECFYYFNEETEESQWEAP 53
            LPPGW+  +DE  +C+YYFN+ET ++QWE P
Sbjct:   54 LPPGWKPFYDETRKCYYYFNKETNKTQWEHP 84
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BLAST of mRNA_M-pyrifera_M_contig78610.18471.1 vs. uniprot
Match: A0A0M9VVN6_9HYPO (WW domain-containing protein n=1 Tax=Escovopsis weberi TaxID=150374 RepID=A0A0M9VVN6_9HYPO)

HSP 1 Score: 48.5 bits (114), Expect = 4.570e-5
Identity = 21/38 (55.26%), Postives = 26/38 (68.42%), Query Frame = 0 
Query:   16 PAGDDEDLPPGWQKIWDEGNECFYYFNEETEESQWEAP 53
            P GD   LP GW  IWD  N+ +YY NE+T ++QWEAP
Sbjct:   51 PPGDRPPLPQGWIPIWDHVNQRWYYANEQTGQTQWEAP 88
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig78610.18471.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A1W4WQV4_AGRPL7.150e-658.06centrosomal protein of 164 kDa isoform X1 n=4 Tax=... [more]
A0A0M9VVN6_9HYPO4.570e-555.26WW domain-containing protein n=1 Tax=Escovopsis we... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001202WW domainSMARTSM00456ww_5coord: 22..55
e-value: 5.8E-8
score: 42.5
IPR001202WW domainPFAMPF00397WWcoord: 23..53
e-value: 2.5E-12
score: 46.7
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 21..55
score: 14.324
NoneNo IPR availableGENE3D2.20.70.10coord: 18..55
e-value: 8.2E-13
score: 49.9
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 18..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig78610contigM-pyrifera_M_contig78610:88..255 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig78610.18471.1mRNA_M-pyrifera_M_contig78610.18471.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig78610 88..255 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig78610.18471.1 ID=prot_M-pyrifera_M_contig78610.18471.1|Name=mRNA_M-pyrifera_M_contig78610.18471.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=56bp
AAAEEEEAAADGGETPAGDDEDLPPGWQKIWDEGNECFYYFNEETEESQW
EAPTA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
IPR036020WW_dom_sf