mRNA_M-pyrifera_M_contig128473.5726.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig128473.5726.1 vs. uniprot
Match: A0A7S2STD2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STD2_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 4.900e-16 Identity = 49/143 (34.27%), Postives = 82/143 (57.34%), Query Frame = 1
Query: 1 VVLLAGASLGMYVGAETGYGSFLTAYMHLKFGYKEAVGQEMSSGFWGAVAAGRLASIWVARVWSPKKMLVVATGGLFVCSVLAVVAGYATYSGHEAASGVFWAISLLIGASMSCIFPATLSLADAYAPLQGKHTTAIVVGAAL 429
+V LA A LG+YVGAETG+G ++ Y H + G+ +A GQ ++ FWG++AAGR+ +I ++ +P L L V +V +AG + GV W + L G M+ ++P +S + + + G+ ++ +VVGAA+
Sbjct: 241 IVALAAAILGLYVGAETGFGGYVLFYAHRRLGFSQAKGQYLTGVFWGSLAAGRILAIPLSLRLAPAHQLY---ADLLVSTV--AMAGIVMLWRYR---GVLWFCTGLFGLGMASVYPTVMSFVEEFINVTGRISSTLVVGAAI 375
BLAST of mRNA_M-pyrifera_M_contig128473.5726.1 vs. uniprot
Match: A0A2V0PBW4_9CHLO (MFS transporter n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PBW4_9CHLO) HSP 1 Score: 57.0 bits (136), Expect = 1.010e-6 Identity = 43/137 (31.39%), Postives = 65/137 (47.45%), Query Frame = 1
Query: 1 VVLLAGASLGMYVGAETGYGSFLTAYMHLKFGYKEAVGQEMSSGFWGAVAAGRLASIWVARVWSPKKMLVVATGGLFVCSVLAVVAGYATYSGHEAASGVFWAISL---LIGASMSCIFPATLSLADAYAPLQGKHT 402
V+L A A + + VG E G+G + T Y G E+ G ++S +WGA AGR+A+ A V P +L + S+ VAG A A W ++ L+G +S F L+L + +AP+ G T
Sbjct: 249 VLLPAAAFVFLSVGLEVGFGGWTTVYGTRYLGESESAGHALTSAYWGAFTAGRIAASAAAAVAPPATLL--------LASMPLAVAGAAAALALPPAVLAGWPATVCVVLVGLGLSTGFANLLALLEVHAPINGSVT 377
BLAST of mRNA_M-pyrifera_M_contig128473.5726.1 vs. uniprot
Match: UPI001E1D8959 (sodium-dependent glucose transporter 1A-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D8959) HSP 1 Score: 53.5 bits (127), Expect = 1.640e-5 Identity = 34/130 (26.15%), Postives = 64/130 (49.23%), Query Frame = 1
Query: 40 GAETGYGSFLTAYMHLKFGYKEAVGQEMSSGFWGAVAAGRLASIWVARVWSPKKMLVVATGGLFVCSVLAVVAGYATYSGHEAASGVFWAISLLIGASMSCIFPATLSLADAYAPLQGKHTTAIVVGAAL 429
G E G F+ AY + G+ A G +++ FW + A GR+ AR + ++++ TGG+FVCSVL + ++G A + W + + + FP+ + D + + G T +++G ++
Sbjct: 319 GGERILGKFIRAYSIEQLGFSVADGSYINTTFWISFAIGRITGFVTARYIPIRILILIETGGVFVCSVLLCI-----FAGDNATA--LWVLIQPLAVFHAPCFPSGIGWGDYHVEMTGMAITFLLLGGSI 441
BLAST of mRNA_M-pyrifera_M_contig128473.5726.1 vs. uniprot
Match: A0A7C5BU03_9BACT (MFS transporter n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7C5BU03_9BACT) HSP 1 Score: 53.1 bits (126), Expect = 2.240e-5 Identity = 39/141 (27.66%), Postives = 65/141 (46.10%), Query Frame = 1
Query: 1 VVLLAGASLGMYVGAETGYGSFLTAYMHLKFGYKEAVGQEMSSGFWGAVAAGRLASIWVARVWSPKKMLVVATGGLFVCSVLAVVAGYATYSGHEAASGVFWAISLLIGASMSCIFPATLSLADAYAPLQGKHTTAIVVGA 423
+VL + +YVGAE+G GS+L AY K V + FW + GR + W A+ S ++ +A G + ++ G G+ + L+G +++ ++P T+S A A P+Q +IVV A
Sbjct: 350 LVLALSFGILLYVGAESGQGSWLAAYFRQNLHSKGPVAAATVAMFWAGIGLGRAITTWTAKHLSDYTIICIALTGATIFQSALLLVG-------SPVPGLV--LVPLLGFALAPVWPTTISRASAQHPMQTGSVLSIVVAA 481
BLAST of mRNA_M-pyrifera_M_contig128473.5726.1 vs. uniprot
Match: A0A7V4XBC5_9BACT (MFS transporter n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7V4XBC5_9BACT) HSP 1 Score: 52.0 bits (123), Expect = 5.290e-5 Identity = 39/141 (27.66%), Postives = 62/141 (43.97%), Query Frame = 1
Query: 1 VVLLAGASLGMYVGAETGYGSFLTAYMHLKFGYKEAVGQEMSSGFWGAVAAGRLASIWVARVWSPKKMLVVATGGLFVCSVLAVVAGYATYSGHEAASGVFWAISLLIGASMSCIFPATLSLADAYAPLQGKHTTAIVVGA 423
+VLL + +YVGAE+G GS++ Y V + FW + AGR A+ W +R S ++ ++ +C +V H G+ A L+G ++ ++P LS A P+Q IVV A
Sbjct: 213 MVLLLSLGILLYVGAESGQGSWIALYFKKGLQAAGPVAAASVAFFWAGIGAGRFAATWTSRRLSNYALICISLAFAAICQAALLVV-------HSPVVGL--ATVPLLGFGLAPVWPTILSCAGDEHPMQSGTVFGIVVAA 344 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig128473.5726.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig128473.5726.1 >prot_M-pyrifera_M_contig128473.5726.1 ID=prot_M-pyrifera_M_contig128473.5726.1|Name=mRNA_M-pyrifera_M_contig128473.5726.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=133bp MYVGAETGYGSFLTAYMHLKFGYKEAVGQEMSSGFWGAVAAGRLASIWVAback to top mRNA from alignment at M-pyrifera_M_contig128473:73..501+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig128473.5726.1 ID=mRNA_M-pyrifera_M_contig128473.5726.1|Name=mRNA_M-pyrifera_M_contig128473.5726.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=429bp|location=Sequence derived from alignment at M-pyrifera_M_contig128473:73..501+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig128473:73..501+ >mRNA_M-pyrifera_M_contig128473.5726.1 ID=mRNA_M-pyrifera_M_contig128473.5726.1|Name=mRNA_M-pyrifera_M_contig128473.5726.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=798bp|location=Sequence derived from alignment at M-pyrifera_M_contig128473:73..501+ (Macrocystis pyrifera P11B4 male)back to top |