prot_M-pyrifera_M_contig128473.5726.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig128473.5726.1
Unique Nameprot_M-pyrifera_M_contig128473.5726.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length133
Homology
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BLAST of mRNA_M-pyrifera_M_contig128473.5726.1 vs. uniprot
Match: A0A2V0PBW4_9CHLO (MFS transporter n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PBW4_9CHLO)

HSP 1 Score: 53.5 bits (127), Expect = 1.220e-5
Identity = 39/125 (31.20%), Postives = 58/125 (46.40%), Query Frame = 0 
Query:    3 VGAETGYGSFLTAYMHLKFGYKEAVGQEMSSGFWGAVAAGRLASIWVARVWSPKKMLVVATGGLFVCSVLAVVAGYATYSGHEAASGVFWAISL---LIGASMSCIFPATLSLADAYAPLQGKHT 124
            VG E G+G + T Y     G  E+ G  ++S +WGA  AGR+A+   A V  P  +L        + S+   VAG A       A    W  ++   L+G  +S  F   L+L + +AP+ G  T
Sbjct:  261 VGLEVGFGGWTTVYGTRYLGESESAGHALTSAYWGAFTAGRIAASAAAAVAPPATLL--------LASMPLAVAGAAAALALPPAVLAGWPATVCVVLVGLGLSTGFANLLALLEVHAPINGSVT 377
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BLAST of mRNA_M-pyrifera_M_contig128473.5726.1 vs. uniprot
Match: UPI001E1D8959 (sodium-dependent glucose transporter 1A-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D8959)

HSP 1 Score: 53.1 bits (126), Expect = 1.690e-5
Identity = 34/130 (26.15%), Postives = 64/130 (49.23%), Query Frame = 0 
Query:    4 GAETGYGSFLTAYMHLKFGYKEAVGQEMSSGFWGAVAAGRLASIWVARVWSPKKMLVVATGGLFVCSVLAVVAGYATYSGHEAASGVFWAISLLIGASMSCIFPATLSLADAYAPLQGKHTTAIVVGAAL 133
            G E   G F+ AY   + G+  A G  +++ FW + A GR+     AR    + ++++ TGG+FVCSVL  +     ++G  A +   W +   +    +  FP+ +   D +  + G   T +++G ++
Sbjct:  319 GGERILGKFIRAYSIEQLGFSVADGSYINTTFWISFAIGRITGFVTARYIPIRILILIETGGVFVCSVLLCI-----FAGDNATA--LWVLIQPLAVFHAPCFPSGIGWGDYHVEMTGMAITFLLLGGSI 441
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BLAST of mRNA_M-pyrifera_M_contig128473.5726.1 vs. uniprot
Match: A0A7C5BU03_9BACT (MFS transporter n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7C5BU03_9BACT)

HSP 1 Score: 52.0 bits (123), Expect = 4.270e-5
Identity = 37/131 (28.24%), Postives = 61/131 (46.56%), Query Frame = 0 
Query:    1 MYVGAETGYGSFLTAYMHLKFGYKEAVGQEMSSGFWGAVAAGRLASIWVARVWSPKKMLVVATGGLFVCSVLAVVAGYATYSGHEAASGVFWAISLLIGASMSCIFPATLSLADAYAPLQGKHTTAIVVGA 131
            +YVGAE+G GS+L AY       K  V     + FW  +  GR  + W A+  S   ++ +A  G  +     ++ G           G+   +  L+G +++ ++P T+S A A  P+Q     +IVV A
Sbjct:  360 LYVGAESGQGSWLAAYFRQNLHSKGPVAAATVAMFWAGIGLGRAITTWTAKHLSDYTIICIALTGATIFQSALLLVG-------SPVPGLV--LVPLLGFALAPVWPTTISRASAQHPMQTGSVLSIVVAA 481
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig128473.5726.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V0PBW4_9CHLO1.220e-531.20MFS transporter n=1 Tax=Raphidocelis subcapitata T... [more]
UPI001E1D89591.690e-526.15sodium-dependent glucose transporter 1A-like n=1 T... [more]
A0A7C5BU03_9BACT4.270e-528.24MFS transporter n=1 Tax=Armatimonadetes bacterium ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1250.20coord: 1..133
e-value: 2.8E-22
score: 80.8
NoneNo IPR availablePANTHERPTHR23121FAMILY NOT NAMEDcoord: 1..133
NoneNo IPR availablePANTHERPTHR23121:SF9SODIUM-DEPENDENT GLUCOSE TRANSPORTER 1coord: 1..133
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 59..79
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 34..52
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 53..58
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 91..113
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 80..90
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 114..133
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..33
NoneNo IPR availableTMHMMTMhelixcoord: 59..81
NoneNo IPR availableTMHMMTMhelixcoord: 91..113
IPR036259MFS transporter superfamilySUPERFAMILY103473MFS general substrate transportercoord: 2..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig128473contigM-pyrifera_M_contig128473:103..501 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig128473.5726.1mRNA_M-pyrifera_M_contig128473.5726.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig128473 73..501 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig128473.5726.1 ID=prot_M-pyrifera_M_contig128473.5726.1|Name=mRNA_M-pyrifera_M_contig128473.5726.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=133bp
MYVGAETGYGSFLTAYMHLKFGYKEAVGQEMSSGFWGAVAAGRLASIWVA
RVWSPKKMLVVATGGLFVCSVLAVVAGYATYSGHEAASGVFWAISLLIGA
SMSCIFPATLSLADAYAPLQGKHTTAIVVGAAL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036259MFS_trans_sf