prot_M-pyrifera_M_contig96119.22158.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig96119.22158.1
Unique Nameprot_M-pyrifera_M_contig96119.22158.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length96
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig96119.22158.1 vs. uniprot
Match: A0A0L0FCB8_9EUKA (Uncharacterized protein n=2 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FCB8_9EUKA)

HSP 1 Score: 65.5 bits (158), Expect = 1.940e-10
Identity = 37/101 (36.63%), Postives = 57/101 (56.44%), Query Frame = 0 
Query:    2 LFSTLAWLGILHDRMHD-------FWRFMEVTIPPHPISFIYSEDDQMTPVKPLDDLVQLKKHQGVNIAHVCRLKSSPHVTHLRHHPQTYTTLAKNVLKAA 95
            +F  +A LG+++ R          FW  M+ +       +IYS DD++T  K LD+L+  +K +GV I  + RL+SSPHV HL+ HP+ Y     N+L+ A
Sbjct:  226 VFGIVAALGVVYARATGAPGRGVVFWDHMQQSNLGCKQYYIYSVDDELTDAKYLDELIAYRKEKGVEITAI-RLESSPHVQHLKSHPEVYNQFVDNILEEA 325
[Close]
BLAST of mRNA_M-pyrifera_M_contig96119.22158.1 vs. uniprot
Match: A0A0L0FF09_9EUKA (Uncharacterized protein n=2 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FF09_9EUKA)

HSP 1 Score: 61.6 bits (148), Expect = 4.730e-9
Identity = 36/96 (37.50%), Postives = 54/96 (56.25%), Query Frame = 0 
Query:    1 KLFSTLAWLGILHDRMHDFWRFMEVTIPPHPISFIYSEDDQMTPVKPLDDLVQLKKHQGVNIAHVCRLKSSPHVTHLRHHPQTYTTLAKNVLKAAQ 96
            KL + LA       R   FW  M+ +       +IYS DD +T VK LD+L+  ++ +GV I  + RL+SSPHV HL++HP+ Y      +L+ A+
Sbjct:  239 KLIAVLAETTDSIMRGTLFWEHMQQSNLGCKQYYIYSVDDYLTDVKFLDELITYRREKGVEITAI-RLESSPHVQHLKYHPEVYNKFVDGILEEAR 333
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig96119.22158.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A0L0FCB8_9EUKA1.940e-1036.63Uncharacterized protein n=2 Tax=Sphaeroforma arcti... [more]
A0A0L0FF09_9EUKA4.730e-937.50Uncharacterized protein n=2 Tax=Sphaeroforma arcti... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008547Protein of unknown function DUF829, TMEM53PFAMPF05705DUF829coord: 15..87
e-value: 5.6E-11
score: 42.8
IPR008547Protein of unknown function DUF829, TMEM53PANTHERPTHR12265UNCHARACTERIZEDcoord: 2..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig96119contigM-pyrifera_M_contig96119:55..342 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig96119.22158.1mRNA_M-pyrifera_M_contig96119.22158.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig96119 55..342 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig96119.22158.1 ID=prot_M-pyrifera_M_contig96119.22158.1|Name=mRNA_M-pyrifera_M_contig96119.22158.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=96bp
KLFSTLAWLGILHDRMHDFWRFMEVTIPPHPISFIYSEDDQMTPVKPLDD
LVQLKKHQGVNIAHVCRLKSSPHVTHLRHHPQTYTTLAKNVLKAAQ
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008547DUF829_TMEM53