prot_M-pyrifera_M_contig70225.16784.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig70225.16784.1
Unique Nameprot_M-pyrifera_M_contig70225.16784.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length59
Homology
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BLAST of mRNA_M-pyrifera_M_contig70225.16784.1 vs. uniprot
Match: D7FWZ8_ECTSI (TPR repeat-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWZ8_ECTSI)

HSP 1 Score: 50.1 bits (118), Expect = 2.800e-6
Identity = 26/27 (96.30%), Postives = 27/27 (100.00%), Query Frame = 0 
Query:    1 RLVRAAGKLEEAEPLQRRAVEIGEKVL 27
            RLVRAAGKLEEAEPLQRRAVEIGE+VL
Sbjct:   18 RLVRAAGKLEEAEPLQRRAVEIGEQVL 44
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BLAST of mRNA_M-pyrifera_M_contig70225.16784.1 vs. uniprot
Match: D8LLM3_ECTSI (Kinesin light chain-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLM3_ECTSI)

HSP 1 Score: 49.7 bits (117), Expect = 4.870e-6
Identity = 25/44 (56.82%), Postives = 30/44 (68.18%), Query Frame = 0 
Query:    2 LVRAAGKLEEAEPLQRRAVEIGEKVLGSNSPDLATWANNLGRLL 45
            L  A G+  EA+PL  RA+E+GEK LG + PDLATW NN   LL
Sbjct:    3 LPHALGEDTEADPLYLRAIEVGEKKLGPDHPDLATWLNNQAVLL 46
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BLAST of mRNA_M-pyrifera_M_contig70225.16784.1 vs. uniprot
Match: A0A6H5JJK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK0_9PHAE)

HSP 1 Score: 50.8 bits (120), Expect = 8.150e-6
Identity = 25/48 (52.08%), Postives = 28/48 (58.33%), Query Frame = 0 
Query:    1 RLVRAAGKLEEAEPLQRRAVEIGEKVLGSNSPDLATWANNLGRLLMVR 48
            RL    G   EA+P   RA+EIGEKVLG   PDLA W NN   LL  +
Sbjct:  638 RLHELEGNFAEADPFNLRAIEIGEKVLGPEHPDLAVWLNNRAELLRAQ 685
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BLAST of mRNA_M-pyrifera_M_contig70225.16784.1 vs. uniprot
Match: A0A7S3NLU4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NLU4_9STRA)

HSP 1 Score: 48.9 bits (115), Expect = 1.390e-5
Identity = 22/36 (61.11%), Postives = 27/36 (75.00%), Query Frame = 0 
Query:    2 LVRAAGKLEEAEPLQRRAVEIGEKVLGSNSPDLATW 37
            L+ + GK  EA+PL  RA+EIGEK LG N P+LATW
Sbjct:    8 LLESQGKYNEAKPLYERAIEIGEKTLGPNHPNLATW 43
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BLAST of mRNA_M-pyrifera_M_contig70225.16784.1 vs. uniprot
Match: A0A6H5K0C4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0C4_9PHAE)

HSP 1 Score: 47.8 bits (112), Expect = 8.850e-5
Identity = 24/38 (63.16%), Postives = 28/38 (73.68%), Query Frame = 0 
Query:    3 VRAAGKLEEAEPLQRRAVEIGEKVLGSNSPDLATWANN 40
            VR  GK  EA+PL  RA+EIGEK+LG + PDLAT  NN
Sbjct:  165 VRFRGKYAEADPLYLRAIEIGEKMLGPDHPDLATRLNN 202
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig70225.16784.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FWZ8_ECTSI2.800e-696.30TPR repeat-containing protein n=2 Tax=Ectocarpus T... [more]
D8LLM3_ECTSI4.870e-656.82Kinesin light chain-like protein n=1 Tax=Ectocarpu... [more]
A0A6H5JJK0_9PHAE8.150e-652.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3NLU4_9STRA1.390e-561.11Hypothetical protein (Fragment) n=1 Tax=Aureoumbra... [more]
A0A6H5K0C4_9PHAE8.850e-563.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..57
e-value: 5.8E-13
score: 50.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 4..54
NoneNo IPR availablePFAMPF13424TPR_12coord: 4..55
e-value: 2.3E-9
score: 37.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig70225contigM-pyrifera_M_contig70225:624..800 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig70225.16784.1mRNA_M-pyrifera_M_contig70225.16784.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig70225 624..800 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig70225.16784.1 ID=prot_M-pyrifera_M_contig70225.16784.1|Name=mRNA_M-pyrifera_M_contig70225.16784.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=59bp
RLVRAAGKLEEAEPLQRRAVEIGEKVLGSNSPDLATWANNLGRLLMVRER
PRQASDRV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf