prot_M-pyrifera_M_contig100062.13.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig100062.13.1
Unique Nameprot_M-pyrifera_M_contig100062.13.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length138
Homology
BLAST of mRNA_M-pyrifera_M_contig100062.13.1 vs. uniprot
Match: UPI001C090B1E (iron ABC transporter permease n=1 Tax=Pacificibacter marinus TaxID=658057 RepID=UPI001C090B1E)

HSP 1 Score: 219 bits (557), Expect = 3.820e-66
Identity = 106/136 (77.94%), Postives = 126/136 (92.65%), Query Frame = 0
Query:    1 TYWVLPIGFSIVVIPLVSRFLRAAFWSLDPSQIEAARALGAPPFYRFVRITLPAIMPVVILVAGMNFNTILSEYSMSAFLFNVNNKPLSIALFEGARSSNPEQAAINLVYMTLIMGFSYIIISLADRFGLGGGPRR 136
            +YW+LPIG++IVVIPL+ RFLRAAF++LDP Q+EAA+ALGAPP YRF+R+TLPAI P+++LVAG+N NTILSEY+MSAFLFNVNNKPLSIALFEGARS+NPEQAAINLVYMTLIM FSY+IIS+ADR+GLG    R
Sbjct:  429 SYWILPIGYAIVVIPLMIRFLRAAFYALDPFQLEAAQALGAPPLYRFMRVTLPAIAPIIVLVAGLNINTILSEYTMSAFLFNVNNKPLSIALFEGARSANPEQAAINLVYMTLIMVFSYVIISIADRYGLGKSSGR 564          
BLAST of mRNA_M-pyrifera_M_contig100062.13.1 vs. uniprot
Match: A0A7X4DSU7_9RHOB (Iron ABC transporter permease n=3 Tax=unclassified Boseongicola TaxID=2634418 RepID=A0A7X4DSU7_9RHOB)

HSP 1 Score: 194 bits (494), Expect = 7.430e-57
Identity = 94/132 (71.21%), Postives = 118/132 (89.39%), Query Frame = 0
Query:    2 YWVLPIGFSIVVIPLVSRFLRAAFWSLDPSQIEAARALGAPPFYRFVRITLPAIMPVVILVAGMNFNTILSEYSMSAFLFNVNNKPLSIALFEGARSSNPEQAAINLVYMTLIMGFSYIIISLADRFGLGGG 133
            +W+LPIG+++V IP++ RFLRAAF+SLDP+  EAA++LGAP  YRF+R+T+P ++PV+IL+A M  N ILSEYSMSAFLFNVNNKPLSIALFEGARS+NPEQAAINLVY++LIM FS  I++LADR+GLGGG
Sbjct:  432 FWILPIGYAVVSIPIMMRFLRAAFFSLDPALNEAAQSLGAPASYRFLRVTIPLVLPVMILIAAMTLNGILSEYSMSAFLFNVNNKPLSIALFEGARSANPEQAAINLVYISLIMAFSLGIVTLADRYGLGGG 563          
BLAST of mRNA_M-pyrifera_M_contig100062.13.1 vs. uniprot
Match: A0A3S2UBJ5_9RHOB (Iron ABC transporter permease n=1 Tax=Rhodobacteraceae bacterium CCMM004 TaxID=2499834 RepID=A0A3S2UBJ5_9RHOB)

HSP 1 Score: 190 bits (482), Expect = 4.580e-55
Identity = 90/136 (66.18%), Postives = 115/136 (84.56%), Query Frame = 0
Query:    1 TYWVLPIGFSIVVIPLVSRFLRAAFWSLDPSQIEAARALGAPPFYRFVRITLPAIMPVVILVAGMNFNTILSEYSMSAFLFNVNNKPLSIALFEGARSSNPEQAAINLVYMTLIMGFSYIIISLADRFGLGGGPRR 136
            +YW+LPIG+++  IP++ RFLRA+F SLDP+  EAA++LGAP  YRF RITLP + PV++L++GM  N ++SEYSMSAFLFNVNNKPLSIALFEGARS+NPEQAAIN+VY+ LIM FS + I+LADR+GLG G  +
Sbjct:  432 SYWILPIGYAVGAIPMMIRFLRASFLSLDPALGEAAQSLGAPAHYRFARITLPIVAPVIVLISGMTLNGLMSEYSMSAFLFNVNNKPLSIALFEGARSANPEQAAINMVYIVLIMAFSLVTITLADRYGLGSGQEK 567          
BLAST of mRNA_M-pyrifera_M_contig100062.13.1 vs. uniprot
Match: A0A0P7W9F4_9RHOB (Iron(III) transport system permease protein n=1 Tax=Rhodobacteraceae bacterium HLUCCA08 TaxID=1666913 RepID=A0A0P7W9F4_9RHOB)

HSP 1 Score: 170 bits (430), Expect = 1.750e-47
Identity = 81/137 (59.12%), Postives = 106/137 (77.37%), Query Frame = 0
Query:    1 TYWVLPIGFSIVVIPLVSRFLRAAFWSLDPSQIEAARALGAPPFYRFVRITLPAIMPVVILVAGMNFNTILSEYSMSAFLFNVNNKPLSIALFEGARSSNPEQAAINLVYMTLIMGFSYIIISLADRFGLGGGPRRN 137
            ++W+LPIG+++V++PL+ RFLRAAF  +DP    AAR+LGAP  YRF R+TLP ++P  ILV+GM FN +++EY +SAFL+NVNN PL IA+ EGA S +PEQ A+NLVY  LIMGFS  +I  A+R GLG GPR N
Sbjct:  431 SFWILPIGYTVVILPLMVRFLRAAFIGIDPDYDLAARSLGAPALYRFRRVTLPLVVPTAILVSGMAFNDLMTEYPLSAFLYNVNNTPLPIAIVEGAMSPDPEQKALNLVYSVLIMGFSLAVILFAERIGLGRGPRIN 567          
BLAST of mRNA_M-pyrifera_M_contig100062.13.1 vs. uniprot
Match: A0A2A3BW16_9HYPH (ABC transporter permease n=3 Tax=Mesorhizobium TaxID=68287 RepID=A0A2A3BW16_9HYPH)

HSP 1 Score: 168 bits (425), Expect = 9.270e-47
Identity = 84/136 (61.76%), Postives = 104/136 (76.47%), Query Frame = 0
Query:    2 YWVLPIGFSIVVIPLVSRFLRAAFWSLDPSQIEAARALGAPPFYRFVRITLPAIMPVVILVAGMNFNTILSEYSMSAFLFNVNNKPLSIALFEGARSSNPEQAAINLVYMTLIMGFSYIIISLADRFGLGGGPRRN 137
            YW+LPIG++IV +PL+ RFLRAAF  +DP+  EAAR++GA   YR+ RI LP + P  ILVAGM FN +LSEY +SAFL+NVNNKPL IA+ + A S +PEQ A+NLVY+TLIM FS  II LA+R GLG GP  N
Sbjct:  432 YWLLPIGYAIVALPLMVRFLRAAFSGIDPAYSEAARSMGATGLYRYRRIILPLVAPTAILVAGMAFNELLSEYPLSAFLYNVNNKPLPIAIVDSALSVDPEQGALNLVYVTLIMAFSLAIILLAERIGLGKGPETN 567          
BLAST of mRNA_M-pyrifera_M_contig100062.13.1 vs. uniprot
Match: A0A068TGS7_NEOGA (Binding--dependent transport system inner membrane component family protein n=107 Tax=Rhizobium/Agrobacterium group TaxID=227290 RepID=A0A068TGS7_NEOGA)

HSP 1 Score: 165 bits (417), Expect = 1.330e-45
Identity = 82/134 (61.19%), Postives = 104/134 (77.61%), Query Frame = 0
Query:    1 TYWVLPIGFSIVVIPLVSRFLRAAFWSLDPSQIEAARALGAPPFYRFVRITLPAIMPVVILVAGMNFNTILSEYSMSAFLFNVNNKPLSIALFEGARSSNPEQAAINLVYMTLIMGFSYIIISLADRFGLGGGP 134
            +YW+LPI ++IV +PL+ RFLRAAF  +DP+  EAAR++GA   YR+ RI LP + P  ILVAGM FN +LSEY +SAFL+NVNNKPL IA+ + + S +PEQAA+NLVY+TLIM FS  II LA+R GLG GP
Sbjct:  431 SYWLLPIAYAIVALPLMVRFLRAAFMGIDPAYNEAARSMGAAGLYRYRRIILPIVAPTAILVAGMAFNDLLSEYPLSAFLYNVNNKPLPIAIVDSSLSVDPEQAALNLVYVTLIMAFSMAIILLAERIGLGKGP 564          
BLAST of mRNA_M-pyrifera_M_contig100062.13.1 vs. uniprot
Match: A0A0M7ARH2_9HYPH (Putative 2-aminoethylphosphonate transport system permease protein PhnV n=1 Tax=Roseibium album TaxID=311410 RepID=A0A0M7ARH2_9HYPH)

HSP 1 Score: 164 bits (415), Expect = 2.580e-45
Identity = 76/136 (55.88%), Postives = 109/136 (80.15%), Query Frame = 0
Query:    2 YWVLPIGFSIVVIPLVSRFLRAAFWSLDPSQIEAARALGAPPFYRFVRITLPAIMPVVILVAGMNFNTILSEYSMSAFLFNVNNKPLSIALFEGARSSNPEQAAINLVYMTLIMGFSYIIISLADRFGLGGGPRRN 137
            +W++P  ++++++PL+ RFLRAAF  +DP   EAA++LGA   YRF RI+LP I+P V+L+AG+ FN +++EY +SAFLFNVNN+PLS+A+ +GARS++PEQ A+NLVY+TLIM  S +II LA+R  +G GP RN
Sbjct:  432 WWIVPAAYTVIIMPLMVRFLRAAFVGIDPHYGEAAQSLGASALYRFRRISLPLILPTVVLLAGLKFNDLMTEYPVSAFLFNVNNRPLSLAIVDGARSADPEQRAVNLVYVTLIMVASMVIIVLAERLSMGRGPERN 567          
BLAST of mRNA_M-pyrifera_M_contig100062.13.1 vs. uniprot
Match: UPI001F41D71F (ABC transporter permease subunit n=1 Tax=Rhizobium meliloti TaxID=382 RepID=UPI001F41D71F)

HSP 1 Score: 163 bits (413), Expect = 4.830e-45
Identity = 76/133 (57.14%), Postives = 105/133 (78.95%), Query Frame = 0
Query:    2 YWVLPIGFSIVVIPLVSRFLRAAFWSLDPSQIEAARALGAPPFYRFVRITLPAIMPVVILVAGMNFNTILSEYSMSAFLFNVNNKPLSIALFEGARSSNPEQAAINLVYMTLIMGFSYIIISLADRFGLGGGP 134
            YW+LPIG++++++PL  RF+RAAF  +DP+  EAARA+GA  FYRF R+ LP + P   LVAGM FN +++EY +SAFL+NV+NKPL IA+ +G+ S++PEQAAI+LVY+TLIM FS ++I LA+R  LG  P
Sbjct:  363 YWLLPIGYAVIILPLTVRFMRAAFLGIDPAYEEAARAMGASGFYRFRRVILPLVAPTATLVAGMTFNDLMAEYPLSAFLYNVHNKPLPIAIVDGSVSADPEQAAISLVYVTLIMAFSLVVILLAERLALGRAP 495          
BLAST of mRNA_M-pyrifera_M_contig100062.13.1 vs. uniprot
Match: UPI000FD5836B (ABC transporter permease subunit n=9 Tax=Sinorhizobium TaxID=28105 RepID=UPI000FD5836B)

HSP 1 Score: 160 bits (404), Expect = 9.830e-44
Identity = 75/133 (56.39%), Postives = 104/133 (78.20%), Query Frame = 0
Query:    2 YWVLPIGFSIVVIPLVSRFLRAAFWSLDPSQIEAARALGAPPFYRFVRITLPAIMPVVILVAGMNFNTILSEYSMSAFLFNVNNKPLSIALFEGARSSNPEQAAINLVYMTLIMGFSYIIISLADRFGLGGGP 134
            YW+LPIG++++++PL  RF+RAAF  +DP+  EAARA+GA  FYRF R+ LP + P   LVAGM FN +++E  +SAFL+NV+NKPL IA+ +G+ S++PEQAAI+LVY+TLIM FS ++I LA+R  LG  P
Sbjct:  431 YWLLPIGYAVIILPLTVRFMRAAFLGIDPAYEEAARAMGASGFYRFRRVILPLVAPTATLVAGMTFNDLMAECPLSAFLYNVHNKPLPIAIVDGSVSADPEQAAISLVYVTLIMAFSLVVILLAERLALGRAP 563          
BLAST of mRNA_M-pyrifera_M_contig100062.13.1 vs. uniprot
Match: UPI00124EC140 (ABC transporter permease subunit n=1 Tax=Brucella anthropi TaxID=529 RepID=UPI00124EC140)

HSP 1 Score: 157 bits (396), Expect = 1.410e-42
Identity = 77/134 (57.46%), Postives = 104/134 (77.61%), Query Frame = 0
Query:    1 TYWVLPIGFSIVVIPLVSRFLRAAFWSLDPSQIEAARALGAPPFYRFVRITLPAIMPVVILVAGMNFNTILSEYSMSAFLFNVNNKPLSIALFEGARSSNPEQAAINLVYMTLIMGFSYIIISLADRFGLGGGP 134
            +YW+LPIG+ I  +PL+ RF+R+AF  +DP+  EAARA+GA   YRF R+ LP + P  ILVAGM FN++++EY +SAFL+NVNNKPL IA+ +GA S++P+QAAI+LVY+TLIM FS  II +A+R  LG  P
Sbjct:  431 SYWLLPIGYVIFSLPLMVRFMRSAFIGIDPAFEEAARAMGASGLYRFRRVILPLVAPTAILVAGMKFNSLMAEYPLSAFLYNVNNKPLPIAIVDGAVSADPDQAAISLVYVTLIMAFSLAIILVAERLSLGRTP 564          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100062.13.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001C090B1E3.820e-6677.94iron ABC transporter permease n=1 Tax=Pacificibact... [more]
A0A7X4DSU7_9RHOB7.430e-5771.21Iron ABC transporter permease n=3 Tax=unclassified... [more]
A0A3S2UBJ5_9RHOB4.580e-5566.18Iron ABC transporter permease n=1 Tax=Rhodobactera... [more]
A0A0P7W9F4_9RHOB1.750e-4759.12Iron(III) transport system permease protein n=1 Ta... [more]
A0A2A3BW16_9HYPH9.270e-4761.76ABC transporter permease n=3 Tax=Mesorhizobium Tax... [more]
A0A068TGS7_NEOGA1.330e-4561.19Binding--dependent transport system inner membrane... [more]
A0A0M7ARH2_9HYPH2.580e-4555.88Putative 2-aminoethylphosphonate transport system ... [more]
UPI001F41D71F4.830e-4557.14ABC transporter permease subunit n=1 Tax=Rhizobium... [more]
UPI000FD5836B9.830e-4456.39ABC transporter permease subunit n=9 Tax=Sinorhizo... [more]
UPI00124EC1401.410e-4257.46ABC transporter permease subunit n=1 Tax=Brucella ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000515ABC transporter type 1, transmembrane domain MetI-likePFAMPF00528BPD_transp_1coord: 10..124
e-value: 9.1E-13
score: 48.3
IPR000515ABC transporter type 1, transmembrane domain MetI-likePROSITEPS50928ABC_TM1coord: 1..121
score: 16.854
IPR035906MetI-like superfamilyGENE3D1.10.3720.10coord: 1..128
e-value: 5.4E-19
score: 70.3
IPR035906MetI-like superfamilySUPERFAMILY161098MetI-likecoord: 1..123
NoneNo IPR availablePANTHERPTHR43357FAMILY NOT NAMEDcoord: 1..131
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..26
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 104..125
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 68..103
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 126..137
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 27..46
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 47..67
NoneNo IPR availableTMHMMTMhelixcoord: 50..72
NoneNo IPR availableTMHMMTMhelixcoord: 2..21
NoneNo IPR availableTMHMMTMhelixcoord: 106..125

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig100062contigM-pyrifera_M_contig100062:8..421 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig100062.13.1mRNA_M-pyrifera_M_contig100062.13.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig100062 8..421 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig100062.13.1 ID=prot_M-pyrifera_M_contig100062.13.1|Name=mRNA_M-pyrifera_M_contig100062.13.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=138bp
TYWVLPIGFSIVVIPLVSRFLRAAFWSLDPSQIEAARALGAPPFYRFVRI
TLPAIMPVVILVAGMNFNTILSEYSMSAFLFNVNNKPLSIALFEGARSSN
PEQAAINLVYMTLIMGFSYIIISLADRFGLGGGPRRN*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000515MetI-like
IPR035906MetI-like_sf