prot_M-pyrifera_M_contig100062.13.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig100062.13.1
Unique Name	prot_M-pyrifera_M_contig100062.13.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	138

Homology

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BLAST of mRNA_M-pyrifera_M_contig100062.13.1 vs. uniprot
Match: UPI001C090B1E (iron ABC transporter permease n=1 Tax=Pacificibacter marinus TaxID=658057 RepID=UPI001C090B1E)

HSP 1 Score: 219 bits (557), Expect = 3.820e-66
Identity = 106/136 (77.94%), Postives = 126/136 (92.65%), Query Frame = 0

Query:    1 TYWVLPIGFSIVVIPLVSRFLRAAFWSLDPSQIEAARALGAPPFYRFVRITLPAIMPVVILVAGMNFNTILSEYSMSAFLFNVNNKPLSIALFEGARSSNPEQAAINLVYMTLIMGFSYIIISLADRFGLGGGPRR 136
            +YW+LPIG++IVVIPL+ RFLRAAF++LDP Q+EAA+ALGAPP YRF+R+TLPAI P+++LVAG+N NTILSEY+MSAFLFNVNNKPLSIALFEGARS+NPEQAAINLVYMTLIM FSY+IIS+ADR+GLG    R
Sbjct:  429 SYWILPIGYAIVVIPLMIRFLRAAFYALDPFQLEAAQALGAPPLYRFMRVTLPAIAPIIVLVAGLNINTILSEYTMSAFLFNVNNKPLSIALFEGARSANPEQAAINLVYMTLIMVFSYVIISIADRYGLGKSSGR 564

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BLAST of mRNA_M-pyrifera_M_contig100062.13.1 vs. uniprot
Match: A0A7X4DSU7_9RHOB (Iron ABC transporter permease n=3 Tax=unclassified Boseongicola TaxID=2634418 RepID=A0A7X4DSU7_9RHOB)

HSP 1 Score: 194 bits (494), Expect = 7.430e-57
Identity = 94/132 (71.21%), Postives = 118/132 (89.39%), Query Frame = 0

Query:    2 YWVLPIGFSIVVIPLVSRFLRAAFWSLDPSQIEAARALGAPPFYRFVRITLPAIMPVVILVAGMNFNTILSEYSMSAFLFNVNNKPLSIALFEGARSSNPEQAAINLVYMTLIMGFSYIIISLADRFGLGGG 133
            +W+LPIG+++V IP++ RFLRAAF+SLDP+  EAA++LGAP  YRF+R+T+P ++PV+IL+A M  N ILSEYSMSAFLFNVNNKPLSIALFEGARS+NPEQAAINLVY++LIM FS  I++LADR+GLGGG
Sbjct:  432 FWILPIGYAVVSIPIMMRFLRAAFFSLDPALNEAAQSLGAPASYRFLRVTIPLVLPVMILIAAMTLNGILSEYSMSAFLFNVNNKPLSIALFEGARSANPEQAAINLVYISLIMAFSLGIVTLADRYGLGGG 563

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BLAST of mRNA_M-pyrifera_M_contig100062.13.1 vs. uniprot
Match: A0A3S2UBJ5_9RHOB (Iron ABC transporter permease n=1 Tax=Rhodobacteraceae bacterium CCMM004 TaxID=2499834 RepID=A0A3S2UBJ5_9RHOB)

HSP 1 Score: 190 bits (482), Expect = 4.580e-55
Identity = 90/136 (66.18%), Postives = 115/136 (84.56%), Query Frame = 0

Query:    1 TYWVLPIGFSIVVIPLVSRFLRAAFWSLDPSQIEAARALGAPPFYRFVRITLPAIMPVVILVAGMNFNTILSEYSMSAFLFNVNNKPLSIALFEGARSSNPEQAAINLVYMTLIMGFSYIIISLADRFGLGGGPRR 136
            +YW+LPIG+++  IP++ RFLRA+F SLDP+  EAA++LGAP  YRF RITLP + PV++L++GM  N ++SEYSMSAFLFNVNNKPLSIALFEGARS+NPEQAAIN+VY+ LIM FS + I+LADR+GLG G  +
Sbjct:  432 SYWILPIGYAVGAIPMMIRFLRASFLSLDPALGEAAQSLGAPAHYRFARITLPIVAPVIVLISGMTLNGLMSEYSMSAFLFNVNNKPLSIALFEGARSANPEQAAINMVYIVLIMAFSLVTITLADRYGLGSGQEK 567

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BLAST of mRNA_M-pyrifera_M_contig100062.13.1 vs. uniprot
Match: A0A0P7W9F4_9RHOB (Iron(III) transport system permease protein n=1 Tax=Rhodobacteraceae bacterium HLUCCA08 TaxID=1666913 RepID=A0A0P7W9F4_9RHOB)

HSP 1 Score: 170 bits (430), Expect = 1.750e-47
Identity = 81/137 (59.12%), Postives = 106/137 (77.37%), Query Frame = 0

Query:    1 TYWVLPIGFSIVVIPLVSRFLRAAFWSLDPSQIEAARALGAPPFYRFVRITLPAIMPVVILVAGMNFNTILSEYSMSAFLFNVNNKPLSIALFEGARSSNPEQAAINLVYMTLIMGFSYIIISLADRFGLGGGPRRN 137
            ++W+LPIG+++V++PL+ RFLRAAF  +DP    AAR+LGAP  YRF R+TLP ++P  ILV+GM FN +++EY +SAFL+NVNN PL IA+ EGA S +PEQ A+NLVY  LIMGFS  +I  A+R GLG GPR N
Sbjct:  431 SFWILPIGYTVVILPLMVRFLRAAFIGIDPDYDLAARSLGAPALYRFRRVTLPLVVPTAILVSGMAFNDLMTEYPLSAFLYNVNNTPLPIAIVEGAMSPDPEQKALNLVYSVLIMGFSLAVILFAERIGLGRGPRIN 567

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BLAST of mRNA_M-pyrifera_M_contig100062.13.1 vs. uniprot
Match: A0A2A3BW16_9HYPH (ABC transporter permease n=3 Tax=Mesorhizobium TaxID=68287 RepID=A0A2A3BW16_9HYPH)

HSP 1 Score: 168 bits (425), Expect = 9.270e-47
Identity = 84/136 (61.76%), Postives = 104/136 (76.47%), Query Frame = 0

Query:    2 YWVLPIGFSIVVIPLVSRFLRAAFWSLDPSQIEAARALGAPPFYRFVRITLPAIMPVVILVAGMNFNTILSEYSMSAFLFNVNNKPLSIALFEGARSSNPEQAAINLVYMTLIMGFSYIIISLADRFGLGGGPRRN 137
            YW+LPIG++IV +PL+ RFLRAAF  +DP+  EAAR++GA   YR+ RI LP + P  ILVAGM FN +LSEY +SAFL+NVNNKPL IA+ + A S +PEQ A+NLVY+TLIM FS  II LA+R GLG GP  N
Sbjct:  432 YWLLPIGYAIVALPLMVRFLRAAFSGIDPAYSEAARSMGATGLYRYRRIILPLVAPTAILVAGMAFNELLSEYPLSAFLYNVNNKPLPIAIVDSALSVDPEQGALNLVYVTLIMAFSLAIILLAERIGLGKGPETN 567

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BLAST of mRNA_M-pyrifera_M_contig100062.13.1 vs. uniprot
Match: A0A068TGS7_NEOGA (Binding--dependent transport system inner membrane component family protein n=107 Tax=Rhizobium/Agrobacterium group TaxID=227290 RepID=A0A068TGS7_NEOGA)

HSP 1 Score: 165 bits (417), Expect = 1.330e-45
Identity = 82/134 (61.19%), Postives = 104/134 (77.61%), Query Frame = 0

Query:    1 TYWVLPIGFSIVVIPLVSRFLRAAFWSLDPSQIEAARALGAPPFYRFVRITLPAIMPVVILVAGMNFNTILSEYSMSAFLFNVNNKPLSIALFEGARSSNPEQAAINLVYMTLIMGFSYIIISLADRFGLGGGP 134
            +YW+LPI ++IV +PL+ RFLRAAF  +DP+  EAAR++GA   YR+ RI LP + P  ILVAGM FN +LSEY +SAFL+NVNNKPL IA+ + + S +PEQAA+NLVY+TLIM FS  II LA+R GLG GP
Sbjct:  431 SYWLLPIAYAIVALPLMVRFLRAAFMGIDPAYNEAARSMGAAGLYRYRRIILPIVAPTAILVAGMAFNDLLSEYPLSAFLYNVNNKPLPIAIVDSSLSVDPEQAALNLVYVTLIMAFSMAIILLAERIGLGKGP 564

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BLAST of mRNA_M-pyrifera_M_contig100062.13.1 vs. uniprot
Match: A0A0M7ARH2_9HYPH (Putative 2-aminoethylphosphonate transport system permease protein PhnV n=1 Tax=Roseibium album TaxID=311410 RepID=A0A0M7ARH2_9HYPH)

HSP 1 Score: 164 bits (415), Expect = 2.580e-45
Identity = 76/136 (55.88%), Postives = 109/136 (80.15%), Query Frame = 0

Query:    2 YWVLPIGFSIVVIPLVSRFLRAAFWSLDPSQIEAARALGAPPFYRFVRITLPAIMPVVILVAGMNFNTILSEYSMSAFLFNVNNKPLSIALFEGARSSNPEQAAINLVYMTLIMGFSYIIISLADRFGLGGGPRRN 137
            +W++P  ++++++PL+ RFLRAAF  +DP   EAA++LGA   YRF RI+LP I+P V+L+AG+ FN +++EY +SAFLFNVNN+PLS+A+ +GARS++PEQ A+NLVY+TLIM  S +II LA+R  +G GP RN
Sbjct:  432 WWIVPAAYTVIIMPLMVRFLRAAFVGIDPHYGEAAQSLGASALYRFRRISLPLILPTVVLLAGLKFNDLMTEYPVSAFLFNVNNRPLSLAIVDGARSADPEQRAVNLVYVTLIMVASMVIIVLAERLSMGRGPERN 567

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BLAST of mRNA_M-pyrifera_M_contig100062.13.1 vs. uniprot
Match: UPI001F41D71F (ABC transporter permease subunit n=1 Tax=Rhizobium meliloti TaxID=382 RepID=UPI001F41D71F)

HSP 1 Score: 163 bits (413), Expect = 4.830e-45
Identity = 76/133 (57.14%), Postives = 105/133 (78.95%), Query Frame = 0

Query:    2 YWVLPIGFSIVVIPLVSRFLRAAFWSLDPSQIEAARALGAPPFYRFVRITLPAIMPVVILVAGMNFNTILSEYSMSAFLFNVNNKPLSIALFEGARSSNPEQAAINLVYMTLIMGFSYIIISLADRFGLGGGP 134
            YW+LPIG++++++PL  RF+RAAF  +DP+  EAARA+GA  FYRF R+ LP + P   LVAGM FN +++EY +SAFL+NV+NKPL IA+ +G+ S++PEQAAI+LVY+TLIM FS ++I LA+R  LG  P
Sbjct:  363 YWLLPIGYAVIILPLTVRFMRAAFLGIDPAYEEAARAMGASGFYRFRRVILPLVAPTATLVAGMTFNDLMAEYPLSAFLYNVHNKPLPIAIVDGSVSADPEQAAISLVYVTLIMAFSLVVILLAERLALGRAP 495

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BLAST of mRNA_M-pyrifera_M_contig100062.13.1 vs. uniprot
Match: UPI000FD5836B (ABC transporter permease subunit n=9 Tax=Sinorhizobium TaxID=28105 RepID=UPI000FD5836B)

HSP 1 Score: 160 bits (404), Expect = 9.830e-44
Identity = 75/133 (56.39%), Postives = 104/133 (78.20%), Query Frame = 0

Query:    2 YWVLPIGFSIVVIPLVSRFLRAAFWSLDPSQIEAARALGAPPFYRFVRITLPAIMPVVILVAGMNFNTILSEYSMSAFLFNVNNKPLSIALFEGARSSNPEQAAINLVYMTLIMGFSYIIISLADRFGLGGGP 134
            YW+LPIG++++++PL  RF+RAAF  +DP+  EAARA+GA  FYRF R+ LP + P   LVAGM FN +++E  +SAFL+NV+NKPL IA+ +G+ S++PEQAAI+LVY+TLIM FS ++I LA+R  LG  P
Sbjct:  431 YWLLPIGYAVIILPLTVRFMRAAFLGIDPAYEEAARAMGASGFYRFRRVILPLVAPTATLVAGMTFNDLMAECPLSAFLYNVHNKPLPIAIVDGSVSADPEQAAISLVYVTLIMAFSLVVILLAERLALGRAP 563

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BLAST of mRNA_M-pyrifera_M_contig100062.13.1 vs. uniprot
Match: UPI00124EC140 (ABC transporter permease subunit n=1 Tax=Brucella anthropi TaxID=529 RepID=UPI00124EC140)

HSP 1 Score: 157 bits (396), Expect = 1.410e-42
Identity = 77/134 (57.46%), Postives = 104/134 (77.61%), Query Frame = 0

Query:    1 TYWVLPIGFSIVVIPLVSRFLRAAFWSLDPSQIEAARALGAPPFYRFVRITLPAIMPVVILVAGMNFNTILSEYSMSAFLFNVNNKPLSIALFEGARSSNPEQAAINLVYMTLIMGFSYIIISLADRFGLGGGP 134
            +YW+LPIG+ I  +PL+ RF+R+AF  +DP+  EAARA+GA   YRF R+ LP + P  ILVAGM FN++++EY +SAFL+NVNNKPL IA+ +GA S++P+QAAI+LVY+TLIM FS  II +A+R  LG  P
Sbjct:  431 SYWLLPIGYVIFSLPLMVRFMRSAFIGIDPAFEEAARAMGASGLYRFRRVILPLVAPTAILVAGMKFNSLMAEYPLSAFLYNVNNKPLPIAIVDGAVSADPDQAAISLVYVTLIMAFSLAIILVAERLSLGRTP 564

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig100062.13.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig100062.13.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
UPI001C090B1E	3.820e-66	77.94	iron ABC transporter permease n=1 Tax=Pacificibact...	[more]
A0A7X4DSU7_9RHOB	7.430e-57	71.21	Iron ABC transporter permease n=3 Tax=unclassified...	[more]
A0A3S2UBJ5_9RHOB	4.580e-55	66.18	Iron ABC transporter permease n=1 Tax=Rhodobactera...	[more]
A0A0P7W9F4_9RHOB	1.750e-47	59.12	Iron(III) transport system permease protein n=1 Ta...	[more]
A0A2A3BW16_9HYPH	9.270e-47	61.76	ABC transporter permease n=3 Tax=Mesorhizobium Tax...	[more]
A0A068TGS7_NEOGA	1.330e-45	61.19	Binding--dependent transport system inner membrane...	[more]
A0A0M7ARH2_9HYPH	2.580e-45	55.88	Putative 2-aminoethylphosphonate transport system ...	[more]
UPI001F41D71F	4.830e-45	57.14	ABC transporter permease subunit n=1 Tax=Rhizobium...	[more]
UPI000FD5836B	9.830e-44	56.39	ABC transporter permease subunit n=9 Tax=Sinorhizo...	[more]
UPI00124EC140	1.410e-42	57.46	ABC transporter permease subunit n=1 Tax=Brucella ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000515	ABC transporter type 1, transmembrane domain MetI-like	PFAM	PF00528	BPD_transp_1	coord: 10..124 e-value: 9.1E-13 score: 48.3
IPR000515	ABC transporter type 1, transmembrane domain MetI-like	PROSITE	PS50928	ABC_TM1	coord: 1..121 score: 16.854
IPR035906	MetI-like superfamily	GENE3D	1.10.3720.10		coord: 1..128 e-value: 5.4E-19 score: 70.3
IPR035906	MetI-like superfamily	SUPERFAMILY	161098	MetI-like	coord: 1..123
None	No IPR available	PANTHER	PTHR43357	FAMILY NOT NAMED	coord: 1..131
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 6..26
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..5
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 104..125
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 68..103
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 126..137
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 27..46
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 47..67
None	No IPR available	TMHMM	TMhelix		coord: 50..72
None	No IPR available	TMHMM	TMhelix		coord: 2..21
None	No IPR available	TMHMM	TMhelix		coord: 106..125

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig100062	contig	M-pyrifera_M_contig100062:8..421 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig100062.13.1	mRNA_M-pyrifera_M_contig100062.13.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig100062 8..421 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig100062.13.1 ID=prot_M-pyrifera_M_contig100062.13.1|Name=mRNA_M-pyrifera_M_contig100062.13.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=138bp
TYWVLPIGFSIVVIPLVSRFLRAAFWSLDPSQIEAARALGAPPFYRFVRI
TLPAIMPVVILVAGMNFNTILSEYSMSAFLFNVNNKPLSIALFEGARSSN
PEQAAINLVYMTLIMGFSYIIISLADRFGLGGGPRRN*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000515	MetI-like
IPR035906	MetI-like_sf