mRNA_M-pyrifera_M_contig90525.20988.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig90525.20988.1 vs. uniprot
Match: W7HVG3_9PEZI (RNA-dependent RNA polymerase n=1 Tax=Drechslerella stenobrocha 248 TaxID=1043628 RepID=W7HVG3_9PEZI) HSP 1 Score: 67.4 bits (163), Expect = 8.850e-10 Identity = 62/200 (31.00%), Postives = 96/200 (48.00%), Query Frame = 1 Query: 1 TLEVMRFSSPPAPASTHFALLVLLLSWGCPCGVLRARLSERAA-ELRRALRDLETCKRVLLEAGHGA-----TIDQVAATSTRSQVG-----RAAALIAYGMDA-EPAVASATYNVGRAELDAVVDRGALRIEQSRSLLLVPDPTGLLQPGQVFVHFSCP-----PTGVSHDGILRGPVLVARAPCHAASDLQAWTAVNL 549 TL+V++ SS +P + +F LL +LL G P L L E A E+ + + L A G + D+ S R + RAA ++ G EP + Y +A D V ++ +R+ +S +PDP+G L+ GQ+++ FS P P + +L+G VLV R P H ASD+Q TAV++ Sbjct: 849 TLDVVQVSSSLSPTTLNFQLLPILLQNGVPYEALADLLREDIAREIGDLFEEGRLSNAIYLRAYLGRISFNFSRDEQDRISARGSMPAKKSERAALMLESGFTLQEPCLRDWFYETLKAHCDDVKEKMHIRVAKSCYPFCIPDPSGRLKKGQIYLRFSQPRNFVDPKTMLSIDVLQGDVLVGRNPAHFASDIQRVTAVDI 1048
BLAST of mRNA_M-pyrifera_M_contig90525.20988.1 vs. uniprot
Match: A0A1X2I9U5_9FUNG (RNA-dependent RNA polymerase n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2I9U5_9FUNG) HSP 1 Score: 59.3 bits (142), Expect = 5.270e-7 Identity = 34/90 (37.78%), Postives = 54/90 (60.00%), Query Frame = 1 Query: 289 VASATYNVGRAELDAVVDRGALRIEQSRSLLLVPDPTGLLQPGQVFVHFSC----PPTGVSHDGILRGPVLVARAPCHAASDLQAWTAVN 546 +AS T V +A L + + + ++QS +L+ +PDPTG+L+P +VF+ S TG+ H G++ G +LV R PC SD+Q AV+ Sbjct: 773 LASKTTTVFKAMLQTLSSKYRVEVQQSCTLMCIPDPTGILKPNEVFLQLSNRKVDEKTGI-HAGLITGDILVTRNPCGLKSDIQKVRAVD 861
BLAST of mRNA_M-pyrifera_M_contig90525.20988.1 vs. uniprot
Match: A0A436ZNP6_9PEZI (RNA-directed RNA polymerase n=1 Tax=Arthrobotrys flagrans TaxID=97331 RepID=A0A436ZNP6_9PEZI) HSP 1 Score: 55.8 bits (133), Expect = 8.260e-6 Identity = 35/80 (43.75%), Postives = 49/80 (61.25%), Query Frame = 1 Query: 328 DAVVDRGALRIEQSRSLLLVPDPTGLLQPGQVFVHFSC------PPTGVSHDGILRGPVLVARAPCHAASDLQAWTAVNL 549 +++ D+ +RI QS VPDP+G L+ GQV++ F P T ++ D ILRG VLV R P H ASD+Q TAV++ Sbjct: 1009 ESIKDKMRIRIAQSCQPYCVPDPSGKLKKGQVYLRFGPESKFIDPKTMMAMD-ILRGDVLVGRNPAHFASDVQKVTAVDI 1087
BLAST of mRNA_M-pyrifera_M_contig90525.20988.1 vs. uniprot
Match: UPI0019076D01 (RNA dependent RNA polymerase-domain-containing protein n=1 Tax=Cantharellus anzutake TaxID=1750568 RepID=UPI0019076D01) HSP 1 Score: 55.1 bits (131), Expect = 1.490e-5 Identity = 33/73 (45.21%), Postives = 42/73 (57.53%), Query Frame = 1 Query: 337 VDRGALRIEQSRSLLLVPDPTGLLQPGQVFVHFSCP---PTGVSHDGILRGPVLVARAPCHAASDLQAWTAVN 546 +DR + + S L VPDP G+L+PG+VF S P G D +L GPVL R PC ASD+Q + AVN Sbjct: 779 IDRYKVGVPLSAEGLAVPDPLGILEPGEVFCRSSTPWLDSDGHWRDTVL-GPVLATRHPCKVASDVQKFEAVN 850
BLAST of mRNA_M-pyrifera_M_contig90525.20988.1 vs. uniprot
Match: A0A168SEA0_ABSGL (RNA-directed RNA polymerase n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A168SEA0_ABSGL) HSP 1 Score: 55.1 bits (131), Expect = 1.550e-5 Identity = 32/90 (35.56%), Postives = 54/90 (60.00%), Query Frame = 1 Query: 289 VASATYNVGRAELDAVVDRGALRIEQSRSLLLVPDPTGLLQPGQVFVHFSC----PPTGVSHDGILRGPVLVARAPCHAASDLQAWTAVN 546 +A+ T + R L ++ + + ++QS +L+ +PDP+GLL+P +VF+ S TG+ H G++ G +LV+R PC SD Q AV+ Sbjct: 1597 IANRTTSAFRGMLVSLSTKYRVEVQQSCTLMCIPDPSGLLKPNEVFLQLSNRRVDEKTGI-HAGLITGDILVSRNPCGLKSDFQKVQAVD 1685
BLAST of mRNA_M-pyrifera_M_contig90525.20988.1 vs. uniprot
Match: A0A163ABK2_PHYB8 (RNA-dependent RNA polymerase n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A163ABK2_PHYB8) HSP 1 Score: 53.5 bits (127), Expect = 4.940e-5 Identity = 32/91 (35.16%), Postives = 49/91 (53.85%), Query Frame = 1 Query: 283 PAVASATYNVGRAELDAVVDRGALRIEQSRSLLLVPDPTGLLQPGQVFVHFS---CPPTGVSHDGILRGPVLVARAPCHAASDLQAWTAVN 546 P +A+ N+ R + V+ + + ++QS +L VPDPTG+L+ G++F S I+ G VLV R PC SD+Q TAV+ Sbjct: 616 PFLANKITNIFRDTMRMVMSKYRIEVQQSCTLTCVPDPTGMLEEGEIFFQLSRRRVDEKSAIKSSIVLGDVLVTRNPCGLKSDVQKVTAVD 706
BLAST of mRNA_M-pyrifera_M_contig90525.20988.1 vs. uniprot
Match: A0A8H7VMU2_9FUNG (RNA-dependent RNA polymerase n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7VMU2_9FUNG) HSP 1 Score: 53.5 bits (127), Expect = 4.990e-5 Identity = 36/102 (35.29%), Postives = 57/102 (55.88%), Query Frame = 1 Query: 256 LIAYGMD-AEPAVASATYNVGRAELDAVVDRGALRIEQSRSLLLVPDPTGLLQPGQVFVHFSC----PPTGVSHDGILRGPVLVARAPCHAASDLQAWTAVN 546 L+ G D + P VA +V R + AV + + +EQS ++ +PDP G+L+PG+VF+ S TG+ G++ G ++V R PC SD+Q AV+ Sbjct: 679 LLDSGFDLSNPHVAMKVTHVFRDVMKAVCTKYKIEVEQSCTVTCIPDPKGILEPGEVFLQLSGRRVDEKTGIPA-GLVTGDLIVTRNPCGLKSDIQKVKAVD 779
BLAST of mRNA_M-pyrifera_M_contig90525.20988.1 vs. uniprot
Match: A0A7C8U3U9_ORBOL (RNA-dependent RNA polymerase n=1 Tax=Orbilia oligospora TaxID=2813651 RepID=A0A7C8U3U9_ORBOL) HSP 1 Score: 53.1 bits (126), Expect = 6.710e-5 Identity = 63/206 (30.58%), Postives = 100/206 (48.54%), Query Frame = 1 Query: 1 TLEVMRFSSPPAPASTHFALLVLLLSWGCPCGVLRARLSERAAELRRALRDLETCKRVLLEAGHGATIDQVAATSTRSQVGRAAAL---IAYGMDAEPAV--ASATYNVGRAEL------------DAVVDRGALRIEQSRSLLLVPDPTGLLQPGQVFVHFSC------PPTGVSHDGILRGPVLVARAPCHAASDLQAWTAVNL 549 TL++ S P +P++ + +V+LL G L L E ++R + +L R+ A +++V + +R GRA A+ I G+ AE AV +A + + L D + ++ +RI S VPDP+G L+ GQV++ F P T ++ D +LRG VLV R P H ASD+Q TAV++ Sbjct: 523 TLDICNTSKPLSPSALNLQFIVILLHNGVTEATLEQLLRE---DIRNEVTELFKDGRLDDGASLRKYLERVKLSGSRRD-GRATAMKGRIPLGL-AERAVDLINAGFTLKNQTLKDWFEKVLTDHCDTLKNKMRIRIPWSCQPYCVPDPSGELKKGQVYLRFGPESKFIDPKTMMAID-VLRGDVLVGRNPAHFASDIQKVTAVDV 722
BLAST of mRNA_M-pyrifera_M_contig90525.20988.1 vs. uniprot
Match: A0A8H7BPM7_9FUNG (RNA-dependent RNA polymerase n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7BPM7_9FUNG) HSP 1 Score: 52.8 bits (125), Expect = 9.090e-5 Identity = 34/102 (33.33%), Postives = 58/102 (56.86%), Query Frame = 1 Query: 256 LIAYGMD-AEPAVASATYNVGRAELDAVVDRGALRIEQSRSLLLVPDPTGLLQPGQVFVHFSCPPT----GVSHDGILRGPVLVARAPCHAASDLQAWTAVN 546 L+ G D + P ++S + R+ + +V + + +EQS ++ +PDPTG L+ GQ+F+ S T G+ G++ G +V R+PC SD+Q TAV+ Sbjct: 646 LLDSGFDLSNPYLSSKITQIFRSVMRSVTSKYKIEVEQSCTVTCIPDPTGTLEEGQIFLQLSKRRTDEITGIPA-GLVLGKCIVTRSPCGLKSDIQKVTAVD 746
BLAST of mRNA_M-pyrifera_M_contig90525.20988.1 vs. uniprot
Match: A0A7C8N669_ORBOL (RNA-directed RNA polymerase n=1 Tax=Orbilia oligospora TaxID=2813651 RepID=A0A7C8N669_ORBOL) HSP 1 Score: 52.8 bits (125), Expect = 9.320e-5 Identity = 56/201 (27.86%), Postives = 91/201 (45.27%), Query Frame = 1 Query: 1 TLEVMRFSSPPAPASTHFALLVLLLSWGCPCGVLRARLSE----RAAELRR--ALRDLETCKRVLLEAGHGATIDQVAATSTRSQVG-----RAAALIAYGMDAEPAVASATYNVGRAE-LDAVVDRGALRIEQSRSLLLVPDPTGLLQPGQVFVHFSC------PPTGVSHDGILRGPVLVARAPCHAASDLQAWTAVNL 549 TL++ S P P++ + +++LL G L L E EL + L D + ++ L + + AT+ + ++ RA LI G + + + D + D+ +RI S VPDP+G L+ GQV++ F P T ++ D +L+G VLV R P H ASD+Q TAV++ Sbjct: 918 TLDICNTSKPLKPSALNLQFIIILLHNGVTEATLEELLREDIRNEVTELFKDGRLDDGASLRKYLERVKLSGSRRETRATAMKGRIPLGLAERAVDLINAGFTLQNQTLKGWFGTVLTDHCDTLKDKMRIRIPWSCQPYCVPDPSGKLKKGQVYLRFGPESKFIDPKTMMAID-VLKGDVLVGRNPAHFASDIQKVTAVDV 1117 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90525.20988.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig90525.20988.1 >prot_M-pyrifera_M_contig90525.20988.1 ID=prot_M-pyrifera_M_contig90525.20988.1|Name=mRNA_M-pyrifera_M_contig90525.20988.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=179bp MRFSSPPAPASTHFALLVLLLSWGCPCGVLRARLSERAAELRRALRDLETback to top mRNA from alignment at M-pyrifera_M_contig90525:150..698+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig90525.20988.1 ID=mRNA_M-pyrifera_M_contig90525.20988.1|Name=mRNA_M-pyrifera_M_contig90525.20988.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=549bp|location=Sequence derived from alignment at M-pyrifera_M_contig90525:150..698+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig90525:150..698+ >mRNA_M-pyrifera_M_contig90525.20988.1 ID=mRNA_M-pyrifera_M_contig90525.20988.1|Name=mRNA_M-pyrifera_M_contig90525.20988.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1074bp|location=Sequence derived from alignment at M-pyrifera_M_contig90525:150..698+ (Macrocystis pyrifera P11B4 male)back to top |