prot_M-pyrifera_M_contig90525.20988.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig90525.20988.1
Unique Nameprot_M-pyrifera_M_contig90525.20988.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length179
Homology
BLAST of mRNA_M-pyrifera_M_contig90525.20988.1 vs. uniprot
Match: W7HVG3_9PEZI (RNA-dependent RNA polymerase n=1 Tax=Drechslerella stenobrocha 248 TaxID=1043628 RepID=W7HVG3_9PEZI)

HSP 1 Score: 60.8 bits (146), Expect = 1.430e-7
Identity = 59/196 (30.10%), Postives = 92/196 (46.94%), Query Frame = 0
Query:    1 MRFSSPPAPASTHFALLVLLLSWGCPCGVLRARLSERAA-ELRRALRDLETCKRVLLEAGHGA-----TIDQVAATSTRSQVG-----RAAALIAYGMDA-EPAVASATYNVGRAELDAVVDRGALRIEQSRSLLLVPDPTGLLQPGQVFVHFSCP-----PTGVSHDGILRGPVLVARAPCHAASDLQAWTAVNL 179
            ++ SS  +P + +F LL +LL  G P   L   L E  A E+     +      + L A  G      + D+    S R  +      RAA ++  G    EP +    Y   +A  D V ++  +R+ +S     +PDP+G L+ GQ+++ FS P     P  +    +L+G VLV R P H ASD+Q  TAV++
Sbjct:  853 VQVSSSLSPTTLNFQLLPILLQNGVPYEALADLLREDIAREIGDLFEEGRLSNAIYLRAYLGRISFNFSRDEQDRISARGSMPAKKSERAALMLESGFTLQEPCLRDWFYETLKAHCDDVKEKMHIRVAKSCYPFCIPDPSGRLKKGQIYLRFSQPRNFVDPKTMLSIDVLQGDVLVGRNPAHFASDIQRVTAVDI 1048          
BLAST of mRNA_M-pyrifera_M_contig90525.20988.1 vs. uniprot
Match: A0A1X2I9U5_9FUNG (RNA-dependent RNA polymerase n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2I9U5_9FUNG)

HSP 1 Score: 59.3 bits (142), Expect = 4.780e-7
Identity = 34/90 (37.78%), Postives = 54/90 (60.00%), Query Frame = 0
Query:   93 VASATYNVGRAELDAVVDRGALRIEQSRSLLLVPDPTGLLQPGQVFVHFSC----PPTGVSHDGILRGPVLVARAPCHAASDLQAWTAVN 178
            +AS T  V +A L  +  +  + ++QS +L+ +PDPTG+L+P +VF+  S       TG+ H G++ G +LV R PC   SD+Q   AV+
Sbjct:  773 LASKTTTVFKAMLQTLSSKYRVEVQQSCTLMCIPDPTGILKPNEVFLQLSNRKVDEKTGI-HAGLITGDILVTRNPCGLKSDIQKVRAVD 861          
BLAST of mRNA_M-pyrifera_M_contig90525.20988.1 vs. uniprot
Match: A0A436ZNP6_9PEZI (RNA-directed RNA polymerase n=1 Tax=Arthrobotrys flagrans TaxID=97331 RepID=A0A436ZNP6_9PEZI)

HSP 1 Score: 55.8 bits (133), Expect = 7.510e-6
Identity = 35/80 (43.75%), Postives = 49/80 (61.25%), Query Frame = 0
Query:  106 DAVVDRGALRIEQSRSLLLVPDPTGLLQPGQVFVHFSC------PPTGVSHDGILRGPVLVARAPCHAASDLQAWTAVNL 179
            +++ D+  +RI QS     VPDP+G L+ GQV++ F        P T ++ D ILRG VLV R P H ASD+Q  TAV++
Sbjct: 1009 ESIKDKMRIRIAQSCQPYCVPDPSGKLKKGQVYLRFGPESKFIDPKTMMAMD-ILRGDVLVGRNPAHFASDVQKVTAVDI 1087          
BLAST of mRNA_M-pyrifera_M_contig90525.20988.1 vs. uniprot
Match: UPI0019076D01 (RNA dependent RNA polymerase-domain-containing protein n=1 Tax=Cantharellus anzutake TaxID=1750568 RepID=UPI0019076D01)

HSP 1 Score: 55.1 bits (131), Expect = 1.360e-5
Identity = 33/73 (45.21%), Postives = 42/73 (57.53%), Query Frame = 0
Query:  109 VDRGALRIEQSRSLLLVPDPTGLLQPGQVFVHFSCP---PTGVSHDGILRGPVLVARAPCHAASDLQAWTAVN 178
            +DR  + +  S   L VPDP G+L+PG+VF   S P     G   D +L GPVL  R PC  ASD+Q + AVN
Sbjct:  779 IDRYKVGVPLSAEGLAVPDPLGILEPGEVFCRSSTPWLDSDGHWRDTVL-GPVLATRHPCKVASDVQKFEAVN 850          
BLAST of mRNA_M-pyrifera_M_contig90525.20988.1 vs. uniprot
Match: A0A168SEA0_ABSGL (RNA-directed RNA polymerase n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A168SEA0_ABSGL)

HSP 1 Score: 55.1 bits (131), Expect = 1.410e-5
Identity = 32/90 (35.56%), Postives = 54/90 (60.00%), Query Frame = 0
Query:   93 VASATYNVGRAELDAVVDRGALRIEQSRSLLLVPDPTGLLQPGQVFVHFSC----PPTGVSHDGILRGPVLVARAPCHAASDLQAWTAVN 178
            +A+ T +  R  L ++  +  + ++QS +L+ +PDP+GLL+P +VF+  S       TG+ H G++ G +LV+R PC   SD Q   AV+
Sbjct: 1597 IANRTTSAFRGMLVSLSTKYRVEVQQSCTLMCIPDPSGLLKPNEVFLQLSNRRVDEKTGI-HAGLITGDILVSRNPCGLKSDFQKVQAVD 1685          
BLAST of mRNA_M-pyrifera_M_contig90525.20988.1 vs. uniprot
Match: A0A163ABK2_PHYB8 (RNA-dependent RNA polymerase n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A163ABK2_PHYB8)

HSP 1 Score: 53.5 bits (127), Expect = 4.510e-5
Identity = 32/91 (35.16%), Postives = 49/91 (53.85%), Query Frame = 0
Query:   91 PAVASATYNVGRAELDAVVDRGALRIEQSRSLLLVPDPTGLLQPGQVFVHFS---CPPTGVSHDGILRGPVLVARAPCHAASDLQAWTAVN 178
            P +A+   N+ R  +  V+ +  + ++QS +L  VPDPTG+L+ G++F   S             I+ G VLV R PC   SD+Q  TAV+
Sbjct:  616 PFLANKITNIFRDTMRMVMSKYRIEVQQSCTLTCVPDPTGMLEEGEIFFQLSRRRVDEKSAIKSSIVLGDVLVTRNPCGLKSDVQKVTAVD 706          
BLAST of mRNA_M-pyrifera_M_contig90525.20988.1 vs. uniprot
Match: A0A8H7VMU2_9FUNG (RNA-dependent RNA polymerase n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7VMU2_9FUNG)

HSP 1 Score: 53.5 bits (127), Expect = 4.560e-5
Identity = 36/102 (35.29%), Postives = 57/102 (55.88%), Query Frame = 0
Query:   82 LIAYGMD-AEPAVASATYNVGRAELDAVVDRGALRIEQSRSLLLVPDPTGLLQPGQVFVHFSC----PPTGVSHDGILRGPVLVARAPCHAASDLQAWTAVN 178
            L+  G D + P VA    +V R  + AV  +  + +EQS ++  +PDP G+L+PG+VF+  S       TG+   G++ G ++V R PC   SD+Q   AV+
Sbjct:  679 LLDSGFDLSNPHVAMKVTHVFRDVMKAVCTKYKIEVEQSCTVTCIPDPKGILEPGEVFLQLSGRRVDEKTGIPA-GLVTGDLIVTRNPCGLKSDIQKVKAVD 779          
BLAST of mRNA_M-pyrifera_M_contig90525.20988.1 vs. uniprot
Match: A0A8H7BPM7_9FUNG (RNA-dependent RNA polymerase n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7BPM7_9FUNG)

HSP 1 Score: 52.8 bits (125), Expect = 8.320e-5
Identity = 34/102 (33.33%), Postives = 58/102 (56.86%), Query Frame = 0
Query:   82 LIAYGMD-AEPAVASATYNVGRAELDAVVDRGALRIEQSRSLLLVPDPTGLLQPGQVFVHFSCPPT----GVSHDGILRGPVLVARAPCHAASDLQAWTAVN 178
            L+  G D + P ++S    + R+ + +V  +  + +EQS ++  +PDPTG L+ GQ+F+  S   T    G+   G++ G  +V R+PC   SD+Q  TAV+
Sbjct:  646 LLDSGFDLSNPYLSSKITQIFRSVMRSVTSKYKIEVEQSCTVTCIPDPTGTLEEGQIFLQLSKRRTDEITGIPA-GLVLGKCIVTRSPCGLKSDIQKVTAVD 746          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90525.20988.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
W7HVG3_9PEZI1.430e-730.10RNA-dependent RNA polymerase n=1 Tax=Drechslerella... [more]
A0A1X2I9U5_9FUNG4.780e-737.78RNA-dependent RNA polymerase n=1 Tax=Absidia repen... [more]
A0A436ZNP6_9PEZI7.510e-643.75RNA-directed RNA polymerase n=1 Tax=Arthrobotrys f... [more]
UPI0019076D011.360e-545.21RNA dependent RNA polymerase-domain-containing pro... [more]
A0A168SEA0_ABSGL1.410e-535.56RNA-directed RNA polymerase n=1 Tax=Absidia glauca... [more]
A0A163ABK2_PHYB84.510e-535.16RNA-dependent RNA polymerase n=1 Tax=Phycomyces bl... [more]
A0A8H7VMU2_9FUNG4.560e-535.29RNA-dependent RNA polymerase n=1 Tax=Mucor circina... [more]
A0A8H7BPM7_9FUNG8.320e-533.33RNA-dependent RNA polymerase n=1 Tax=Apophysomyces... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 31..51
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 26..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 14..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..179
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..31
score: 0.693
NoneNo IPR availableTMHMMTMhelixcoord: 10..32
IPR007855RNA-dependent RNA polymerase, eukaryotic-typePFAMPF05183RdRPcoord: 2..178
e-value: 6.6E-22
score: 77.9
IPR007855RNA-dependent RNA polymerase, eukaryotic-typePANTHERPTHR23079RNA-DEPENDENT RNA POLYMERASEcoord: 5..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90525contigM-pyrifera_M_contig90525:162..698 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90525.20988.1mRNA_M-pyrifera_M_contig90525.20988.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig90525 150..698 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig90525.20988.1 ID=prot_M-pyrifera_M_contig90525.20988.1|Name=mRNA_M-pyrifera_M_contig90525.20988.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=179bp
MRFSSPPAPASTHFALLVLLLSWGCPCGVLRARLSERAAELRRALRDLET
CKRVLLEAGHGATIDQVAATSTRSQVGRAAALIAYGMDAEPAVASATYNV
GRAELDAVVDRGALRIEQSRSLLLVPDPTGLLQPGQVFVHFSCPPTGVSH
DGILRGPVLVARAPCHAASDLQAWTAVNL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007855RNA-dep_RNA_pol_euk-typ