mRNA_M-pyrifera_M_contig88942.20631.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig88942.20631.1 vs. uniprot
Match: A0A4W4EQX0_ELEEL (RING-type E3 ubiquitin transferase n=1 Tax=Electrophorus electricus TaxID=8005 RepID=A0A4W4EQX0_ELEEL) HSP 1 Score: 59.3 bits (142), Expect = 7.360e-9 Identity = 22/53 (41.51%), Postives = 35/53 (66.04%), Query Frame = 1 Query: 13 DERNCITCVTRIRKVVMWPCGHLCVCRTCARRLAIPECPMCRARVRRFIAVFE 171 +E C+ C++ R V+ CGH+C C +C + L P CPMCR R+RR +A+++ Sbjct: 288 EENTCVICLSNPRGCVLLDCGHVCCCYSCYQALPQPNCPMCRQRIRRVVALYQ 340
BLAST of mRNA_M-pyrifera_M_contig88942.20631.1 vs. uniprot
Match: A0A0S4JX55_BODSA (Zinc finger protein, putative n=1 Tax=Bodo saltans TaxID=75058 RepID=A0A0S4JX55_BODSA) HSP 1 Score: 55.5 bits (132), Expect = 1.150e-7 Identity = 21/45 (46.67%), Postives = 29/45 (64.44%), Query Frame = 1 Query: 4 GMDDERNCITCVTRIRKVVMWPCGHLCVCRTCARRLAIPECPMCR 138 G DD+ C+ C++ + V+ PCGH CVC +CA +P CPMCR Sbjct: 177 GSDDDSECVICLSAAKDTVLVPCGHYCVCSSCAAN--VPSCPMCR 219
BLAST of mRNA_M-pyrifera_M_contig88942.20631.1 vs. uniprot
Match: A0A1S4HCF5_ANOGA (RING-type domain-containing protein n=5 Tax=gambiae species complex TaxID=44542 RepID=A0A1S4HCF5_ANOGA) HSP 1 Score: 55.8 bits (133), Expect = 1.290e-7 Identity = 24/51 (47.06%), Postives = 33/51 (64.71%), Query Frame = 1 Query: 22 NCITCVTRIRKVVMWPCGHLCVCRTCARRLAI--PECPMCRARVRRFIAVF 168 +CI C R +V PCGHLCVC+TCAR +A P CP+CR + + + V+ Sbjct: 324 SCIICEDDDRTIVFVPCGHLCVCKTCARNIAYYNPVCPVCRTHIEKQLKVY 374
BLAST of mRNA_M-pyrifera_M_contig88942.20631.1 vs. uniprot
Match: UPI00193A78B4 (baculoviral IAP repeat-containing protein 3-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI00193A78B4) HSP 1 Score: 55.8 bits (133), Expect = 1.320e-7 Identity = 24/55 (43.64%), Postives = 33/55 (60.00%), Query Frame = 1 Query: 7 MDDERNCITCVTRIRKVVMWPCGHLCVCRTCARRLAIPECPMCRARVRRFIAVFE 171 ++ ER C C+T ++ PCGH+C C TCARRL CP+CR + RFI + Sbjct: 728 LERERTCKICLTLPADILFQPCGHICSCATCARRLY--NCPVCRRAINRFIRTYH 780
BLAST of mRNA_M-pyrifera_M_contig88942.20631.1 vs. uniprot
Match: E9AMX2_LEIMU (RING-type domain-containing protein n=1 Tax=Leishmania mexicana (strain MHOM/GT/2001/U1103) TaxID=929439 RepID=E9AMX2_LEIMU) HSP 1 Score: 55.1 bits (131), Expect = 2.440e-7 Identity = 24/49 (48.98%), Postives = 32/49 (65.31%), Query Frame = 1 Query: 7 MDDERNCITCVTRIRKVVMWPCGHLCVCRTCARRLAIPECPMCRARVRR 153 MDD+ C+ C R V + PCGH+C C CARRL ECP+CR+ ++R Sbjct: 171 MDDKVGCVICCARHIDVALTPCGHVCCCHFCARRLH--ECPVCRSAIQR 217
BLAST of mRNA_M-pyrifera_M_contig88942.20631.1 vs. uniprot
Match: A0A182Y3B9_ANOST (RING-type domain-containing protein n=1 Tax=Anopheles stephensi TaxID=30069 RepID=A0A182Y3B9_ANOST) HSP 1 Score: 54.3 bits (129), Expect = 4.310e-7 Identity = 25/51 (49.02%), Postives = 30/51 (58.82%), Query Frame = 1 Query: 22 NCITCVTRIRKVVMWPCGHLCVCRTCARRLAI--PECPMCRARVRRFIAVF 168 NCI C R V PCGHLCVC+ CAR L P CP+CR + R + V+ Sbjct: 262 NCIICEDNERTVAFIPCGHLCVCKACARELCYYNPLCPLCRKFIERKLEVY 312
BLAST of mRNA_M-pyrifera_M_contig88942.20631.1 vs. uniprot
Match: A0A4Z1T8W4_GIAMU (RING finger domain-containing protein n=1 Tax=Giardia muris TaxID=5742 RepID=A0A4Z1T8W4_GIAMU) HSP 1 Score: 52.4 bits (124), Expect = 5.060e-7 Identity = 20/48 (41.67%), Postives = 28/48 (58.33%), Query Frame = 1 Query: 25 CITCVTRIRKVVMWPCGHLCVCRTCARRLAIPECPMCRARVRRFIAVF 168 C+ C+ + ++ PCGHLCVC TCA R+ CP CR + R I + Sbjct: 39 CVICLMNPKDTLLQPCGHLCVCSTCAGRIMNQTCPFCRTPIERVIKAY 86
BLAST of mRNA_M-pyrifera_M_contig88942.20631.1 vs. uniprot
Match: A0A210PWU6_MIZYE (RING-type E3 ubiquitin transferase n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210PWU6_MIZYE) HSP 1 Score: 53.9 bits (128), Expect = 6.190e-7 Identity = 23/50 (46.00%), Postives = 32/50 (64.00%), Query Frame = 1 Query: 25 CITCVTRIRKVVMWPCGHLCVCRTCARRLAIPE-CPMCRARVRRFIAVFE 171 C+ C+T R+VV+ CGH+C+C C L P CP+CRARV RF+ + Sbjct: 322 CVVCLTNPREVVLISCGHICLCLDCTDLLPTPLLCPVCRARVERFVPYYR 371
BLAST of mRNA_M-pyrifera_M_contig88942.20631.1 vs. uniprot
Match: A0A4Z1SNN5_GIAMU (Ankyrin repeat protein 2 n=1 Tax=Giardia muris TaxID=5742 RepID=A0A4Z1SNN5_GIAMU) HSP 1 Score: 53.5 bits (127), Expect = 7.220e-7 Identity = 20/55 (36.36%), Postives = 32/55 (58.18%), Query Frame = 1 Query: 1 SGMDDERNCITCVTRIRKVVMWPCGHLCVCRTCARRLAIPECPMCRARVRRFIAV 165 + + D CI C+ + ++ PCGHLCVC TCA+++ CP+CR + + V Sbjct: 211 NSISDPLTCIVCLRNPKDTLLQPCGHLCVCSTCAKQIMNQTCPLCRTPIESTVKV 265
BLAST of mRNA_M-pyrifera_M_contig88942.20631.1 vs. uniprot
Match: A0A0N1J4K0_9TRYP (RING-type domain-containing protein n=1 Tax=Leptomonas pyrrhocoris TaxID=157538 RepID=A0A0N1J4K0_9TRYP) HSP 1 Score: 53.5 bits (127), Expect = 8.550e-7 Identity = 24/49 (48.98%), Postives = 32/49 (65.31%), Query Frame = 1 Query: 7 MDDERNCITCVTRIRKVVMWPCGHLCVCRTCARRLAIPECPMCRARVRR 153 ++D C+ C R V + PCGH+C CR CA+RL ECP+CRA V+R Sbjct: 171 IEDSVACVICCARHIDVALTPCGHVCCCRFCAKRLK--ECPVCRATVQR 217 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88942.20631.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig88942.20631.1 >prot_M-pyrifera_M_contig88942.20631.1 ID=prot_M-pyrifera_M_contig88942.20631.1|Name=mRNA_M-pyrifera_M_contig88942.20631.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=56bp MDDERNCITCVTRIRKVVMWPCGHLCVCRTCARRLAIPECPMCRARVRRFback to top mRNA from alignment at M-pyrifera_M_contig88942:372..545- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig88942.20631.1 ID=mRNA_M-pyrifera_M_contig88942.20631.1|Name=mRNA_M-pyrifera_M_contig88942.20631.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=174bp|location=Sequence derived from alignment at M-pyrifera_M_contig88942:372..545- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig88942:372..545- >mRNA_M-pyrifera_M_contig88942.20631.1 ID=mRNA_M-pyrifera_M_contig88942.20631.1|Name=mRNA_M-pyrifera_M_contig88942.20631.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=336bp|location=Sequence derived from alignment at M-pyrifera_M_contig88942:372..545- (Macrocystis pyrifera P11B4 male)back to top |