prot_M-pyrifera_M_contig88942.20631.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig88942.20631.1
Unique Nameprot_M-pyrifera_M_contig88942.20631.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length56
Homology
BLAST of mRNA_M-pyrifera_M_contig88942.20631.1 vs. uniprot
Match: A0A4W4EQX0_ELEEL (RING-type E3 ubiquitin transferase n=1 Tax=Electrophorus electricus TaxID=8005 RepID=A0A4W4EQX0_ELEEL)

HSP 1 Score: 60.1 bits (144), Expect = 3.600e-9
Identity = 22/53 (41.51%), Postives = 35/53 (66.04%), Query Frame = 0
Query:    3 DERNCITCVTRIRKVVMWPCGHLCVCRTCARRLAIPECPMCRARVRRFIAVFE 55
            +E  C+ C++  R  V+  CGH+C C +C + L  P CPMCR R+RR +A+++
Sbjct:  288 EENTCVICLSNPRGCVLLDCGHVCCCYSCYQALPQPNCPMCRQRIRRVVALYQ 340          
BLAST of mRNA_M-pyrifera_M_contig88942.20631.1 vs. uniprot
Match: UPI00193A78B4 (baculoviral IAP repeat-containing protein 3-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI00193A78B4)

HSP 1 Score: 56.6 bits (135), Expect = 6.480e-8
Identity = 24/55 (43.64%), Postives = 33/55 (60.00%), Query Frame = 0
Query:    1 MDDERNCITCVTRIRKVVMWPCGHLCVCRTCARRLAIPECPMCRARVRRFIAVFE 55
            ++ ER C  C+T    ++  PCGH+C C TCARRL    CP+CR  + RFI  + 
Sbjct:  728 LERERTCKICLTLPADILFQPCGHICSCATCARRLY--NCPVCRRAINRFIRTYH 780          
BLAST of mRNA_M-pyrifera_M_contig88942.20631.1 vs. uniprot
Match: A0A2C9KGT5_BIOGL (RING-type E3 ubiquitin transferase n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9KGT5_BIOGL)

HSP 1 Score: 56.2 bits (134), Expect = 8.570e-8
Identity = 22/53 (41.51%), Postives = 35/53 (66.04%), Query Frame = 0
Query:    4 ERNCITCVTRIRKVVMWPCGHLCVCRTCARRLAIPE-CPMCRARVRRFIAVFE 55
            +  C+ C++  R+V+   CGH+ +C TCA  L  P+ CP+CRA + RF+AV+ 
Sbjct:  301 DETCVVCLSNPRQVITLNCGHIAMCATCAELLPYPKKCPVCRADIERFVAVYR 353          
BLAST of mRNA_M-pyrifera_M_contig88942.20631.1 vs. uniprot
Match: A0A1S4HCF5_ANOGA (RING-type domain-containing protein n=5 Tax=gambiae species complex TaxID=44542 RepID=A0A1S4HCF5_ANOGA)

HSP 1 Score: 56.2 bits (134), Expect = 8.670e-8
Identity = 24/51 (47.06%), Postives = 33/51 (64.71%), Query Frame = 0
Query:    6 NCITCVTRIRKVVMWPCGHLCVCRTCARRLAI--PECPMCRARVRRFIAVF 54
            +CI C    R +V  PCGHLCVC+TCAR +A   P CP+CR  + + + V+
Sbjct:  324 SCIICEDDDRTIVFVPCGHLCVCKTCARNIAYYNPVCPVCRTHIEKQLKVY 374          
BLAST of mRNA_M-pyrifera_M_contig88942.20631.1 vs. uniprot
Match: E9AMX2_LEIMU (RING-type domain-containing protein n=1 Tax=Leishmania mexicana (strain MHOM/GT/2001/U1103) TaxID=929439 RepID=E9AMX2_LEIMU)

HSP 1 Score: 55.8 bits (133), Expect = 1.200e-7
Identity = 24/49 (48.98%), Postives = 32/49 (65.31%), Query Frame = 0
Query:    1 MDDERNCITCVTRIRKVVMWPCGHLCVCRTCARRLAIPECPMCRARVRR 49
            MDD+  C+ C  R   V + PCGH+C C  CARRL   ECP+CR+ ++R
Sbjct:  171 MDDKVGCVICCARHIDVALTPCGHVCCCHFCARRLH--ECPVCRSAIQR 217          
BLAST of mRNA_M-pyrifera_M_contig88942.20631.1 vs. uniprot
Match: A0A182Y3B9_ANOST (RING-type domain-containing protein n=1 Tax=Anopheles stephensi TaxID=30069 RepID=A0A182Y3B9_ANOST)

HSP 1 Score: 54.7 bits (130), Expect = 2.890e-7
Identity = 25/51 (49.02%), Postives = 30/51 (58.82%), Query Frame = 0
Query:    6 NCITCVTRIRKVVMWPCGHLCVCRTCARRLAI--PECPMCRARVRRFIAVF 54
            NCI C    R V   PCGHLCVC+ CAR L    P CP+CR  + R + V+
Sbjct:  262 NCIICEDNERTVAFIPCGHLCVCKACARELCYYNPLCPLCRKFIERKLEVY 312          
BLAST of mRNA_M-pyrifera_M_contig88942.20631.1 vs. uniprot
Match: A0A4Z1T8W4_GIAMU (RING finger domain-containing protein n=1 Tax=Giardia muris TaxID=5742 RepID=A0A4Z1T8W4_GIAMU)

HSP 1 Score: 52.8 bits (125), Expect = 3.310e-7
Identity = 20/49 (40.82%), Postives = 28/49 (57.14%), Query Frame = 0
Query:    6 NCITCVTRIRKVVMWPCGHLCVCRTCARRLAIPECPMCRARVRRFIAVF 54
             C+ C+   +  ++ PCGHLCVC TCA R+    CP CR  + R I  +
Sbjct:   38 TCVICLMNPKDTLLQPCGHLCVCSTCAGRIMNQTCPFCRTPIERVIKAY 86          
BLAST of mRNA_M-pyrifera_M_contig88942.20631.1 vs. uniprot
Match: A0A0S4JX55_BODSA (Zinc finger protein, putative n=1 Tax=Bodo saltans TaxID=75058 RepID=A0A0S4JX55_BODSA)

HSP 1 Score: 53.9 bits (128), Expect = 3.930e-7
Identity = 20/43 (46.51%), Postives = 28/43 (65.12%), Query Frame = 0
Query:    2 DDERNCITCVTRIRKVVMWPCGHLCVCRTCARRLAIPECPMCR 44
            DD+  C+ C++  +  V+ PCGH CVC +CA    +P CPMCR
Sbjct:  179 DDDSECVICLSAAKDTVLVPCGHYCVCSSCAAN--VPSCPMCR 219          
BLAST of mRNA_M-pyrifera_M_contig88942.20631.1 vs. uniprot
Match: A0A0N1J4K0_9TRYP (RING-type domain-containing protein n=1 Tax=Leptomonas pyrrhocoris TaxID=157538 RepID=A0A0N1J4K0_9TRYP)

HSP 1 Score: 54.3 bits (129), Expect = 4.200e-7
Identity = 24/49 (48.98%), Postives = 32/49 (65.31%), Query Frame = 0
Query:    1 MDDERNCITCVTRIRKVVMWPCGHLCVCRTCARRLAIPECPMCRARVRR 49
            ++D   C+ C  R   V + PCGH+C CR CA+RL   ECP+CRA V+R
Sbjct:  171 IEDSVACVICCARHIDVALTPCGHVCCCRFCAKRLK--ECPVCRATVQR 217          
BLAST of mRNA_M-pyrifera_M_contig88942.20631.1 vs. uniprot
Match: A0A1E1IQC3_LEIGU (RING-type domain-containing protein n=4 Tax=Viannia TaxID=37616 RepID=A0A1E1IQC3_LEIGU)

HSP 1 Score: 53.9 bits (128), Expect = 5.690e-7
Identity = 23/49 (46.94%), Postives = 32/49 (65.31%), Query Frame = 0
Query:    1 MDDERNCITCVTRIRKVVMWPCGHLCVCRTCARRLAIPECPMCRARVRR 49
            +DD   C+ C +R   V + PCGH+C CR CA+RL   ECP+CR+ + R
Sbjct:  148 IDDAVGCVICCSRHIDVALTPCGHVCCCRFCAKRLR--ECPVCRSALER 194          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig88942.20631.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4W4EQX0_ELEEL3.600e-941.51RING-type E3 ubiquitin transferase n=1 Tax=Electro... [more]
UPI00193A78B46.480e-843.64baculoviral IAP repeat-containing protein 3-like n... [more]
A0A2C9KGT5_BIOGL8.570e-841.51RING-type E3 ubiquitin transferase n=1 Tax=Biompha... [more]
A0A1S4HCF5_ANOGA8.670e-847.06RING-type domain-containing protein n=5 Tax=gambia... [more]
E9AMX2_LEIMU1.200e-748.98RING-type domain-containing protein n=1 Tax=Leishm... [more]
A0A182Y3B9_ANOST2.890e-749.02RING-type domain-containing protein n=1 Tax=Anophe... [more]
A0A4Z1T8W4_GIAMU3.310e-740.82RING finger domain-containing protein n=1 Tax=Giar... [more]
A0A0S4JX55_BODSA3.930e-746.51Zinc finger protein, putative n=1 Tax=Bodo saltans... [more]
A0A0N1J4K0_9TRYP4.200e-748.98RING-type domain-containing protein n=1 Tax=Leptom... [more]
A0A1E1IQC3_LEIGU5.690e-746.94RING-type domain-containing protein n=4 Tax=Vianni... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 4..49
e-value: 3.2E-13
score: 49.3
NoneNo IPR availablePANTHERPTHR12183:SF32MITOCHONDRIAL E3 UBIQUITIN PROTEIN LIGASE 1coord: 2..54
NoneNo IPR availablePANTHERPTHR12183UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEINcoord: 2..54
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 2..50
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1..55
e-value: 2.6E-15
score: 57.7
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 7..44
score: 10.807

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig88942contigM-pyrifera_M_contig88942:372..539 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig88942.20631.1mRNA_M-pyrifera_M_contig88942.20631.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig88942 372..545 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig88942.20631.1 ID=prot_M-pyrifera_M_contig88942.20631.1|Name=mRNA_M-pyrifera_M_contig88942.20631.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=56bp
MDDERNCITCVTRIRKVVMWPCGHLCVCRTCARRLAIPECPMCRARVRRF
IAVFE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING