mRNA_M-pyrifera_M_contig84780.19753.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig84780.19753.1 vs. uniprot
Match: A0A137Q6I9_9AGAR (Replication protein A subunit n=1 Tax=Leucoagaricus sp. SymC.cos TaxID=1714833 RepID=A0A137Q6I9_9AGAR) HSP 1 Score: 109 bits (273), Expect = 7.690e-25 Identity = 68/177 (38.42%), Postives = 97/177 (54.80%), Query Frame = 1 Query: 1 FRCEVSDGEHKMAMMLATALNDKVEASEVQTFSIVKLSKASINPVQGRLIVIALELEPISTQAGPVG-----------GKMPIAAHGAFGTGDGGSXXXXXXXXXXXXXXXXXXXXXPSSTSHMATQPIRTLNPYINRWAIKARVTKKGDIRTWSNARGEGKLFSVDLLDDEGGEIR 498 +R +SDGEH + MLAT N VE+ E++ F++ + +AS N VQ + +VI L ++ + T +G +G G+ P+ GT DG ++ + +T PI L+PY N W IKARVT+K DI+TWSN+RGEGKLF+V L+DD G EIR Sbjct: 46 YRLIISDGEHFVQAMLATQCNGLVESDEIKKFTVATVDRASCNYVQQKRLVILLSVQVLGTPSGKIGNPKALDEPEKKGEAPMV-----GTSDGPKVKVEG-----------------NAENAPSTFPIEGLSPYQNNWTIKARVTQKSDIKTWSNSRGEGKLFNVTLMDDSG-EIR 199
BLAST of mRNA_M-pyrifera_M_contig84780.19753.1 vs. uniprot
Match: A0A060SGP9_PYCCI (Replication protein A subunit n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SGP9_PYCCI) HSP 1 Score: 107 bits (267), Expect = 5.360e-24 Identity = 72/188 (38.30%), Postives = 92/188 (48.94%), Query Frame = 1 Query: 1 FRCEVSDGEHKMAMMLATALNDKVEASEVQTFSIVKLSKASINPVQGRLIVIALELEPISTQAGPVGGKMPIAAHGAFGTGDGGSXXXXXXXXXXXXXXXXXXXXXPSSTSHMAT----------------------QPIRTLNPYINRWAIKARVTKKGDIRTWSNARGEGKLFSVDLLDDEGGEIR 498 +R VSDGEH + MLAT LN VE +V SI + K + N VQG+ ++I L + + +A +G P+ G GGS ++TS AT PI +L+PY N W IKARVT+K DIRTWSN RGEGKLF+V L+ DE GEIR Sbjct: 51 YRVIVSDGEHFLQSMLATQLNHLVEEEQVLKHSIAVIEKFTCNLVQGKKLLIILAMRVLKKEAEKIGSPTPVQPRG------GGSGPSVDMQPDTPTVPSPAPSTSVNTTSTPATVVPRAQPARQQTQAGRGGRSAIYPIESLSPYQNHWTIKARVTQKSDIRTWSNQRGEGKLFNVTLM-DESGEIR 231
BLAST of mRNA_M-pyrifera_M_contig84780.19753.1 vs. uniprot
Match: K5XWA8_AGABU (Replication protein A subunit n=3 Tax=Agaricus bisporus TaxID=5341 RepID=K5XWA8_AGABU) HSP 1 Score: 105 bits (261), Expect = 3.360e-23 Identity = 61/162 (37.65%), Postives = 84/162 (51.85%), Query Frame = 1 Query: 1 FRCEVSDGEHKMAMMLATALNDKVEASEVQTFSIVKLSKASINPVQGRLIVIALELEPISTQAGPVGGKMPIAAHGAFGTGDGGSXXXXXXXXXXXXXXXXXXXXXPSSTSHMATQPIRTLNPYINRWAIKARVTKKGDIRTWSNARGEGKLFSVDLLDDEG 486 +R +SDG++ + MLAT N VE +++ FS+ + +AS N VQG+ +VI L L + + A + G +TS +AT PI L+PY N W IKARVT+K DI+ WSN+RGEGKLFSV L+DD G Sbjct: 49 YRLIISDGKYYIQAMLATQCNSLVETDQIKKFSVAAIERASSNTVQGKRLVIVLSLRILGYPNEKINNPQ------ALDPVNSGPDQNASAEAPPAPAPGGSRQVNKPNTSGVATFPIENLSPYQNNWTIKARVTQKSDIKNWSNSRGEGKLFSVTLMDDSG 204
BLAST of mRNA_M-pyrifera_M_contig84780.19753.1 vs. uniprot
Match: A0A1X2IIJ5_9FUNG (Replication protein A subunit n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2IIJ5_9FUNG) HSP 1 Score: 103 bits (258), Expect = 8.610e-23 Identity = 76/177 (42.94%), Postives = 99/177 (55.93%), Query Frame = 1 Query: 1 FRCEVSDGEHKMAMMLATALNDKVEASEVQTFSIVKLSKASINPVQGRLIVIALELEPISTQAGPVGGKMPIAAHGAFGTGDGGSXXXXXXXXXXXXXXXXXXXXXPSSTSHMATQ-----------PIRTLNPYINRWAIKARVTKKGDIRTWSNARGEGKLFSVDLLDDEGGEIR 498 +R VSDG H M MLA + ++ +++ FSIV+L++A N R I+I L L+ +ST G+ P++ GA XXXXXXX SS S AT PI+ LNPY N+W IKARVT+K DI+TWSNAR EGKLFSV+LL D+ GEI+ Sbjct: 44 YRIIVSDGTHFMQAMLAAVHSPLIDEGQIKKFSIVRLTEAVCNEANNRKILIILHLDVVSTDTNGRIGE-PVSIEGAM------PAKQSAAPQXXXXXXXAQPLFMQSSGSSYATNSVNKQLEASLFPIKGLNPYQNKWVIKARVTQKSDIKTWSNARSEGKLFSVNLL-DQSGEIK 212
BLAST of mRNA_M-pyrifera_M_contig84780.19753.1 vs. uniprot
Match: A0A1Y2J568_PYCCO (Replication protein A subunit n=1 Tax=Trametes coccinea BRFM310 TaxID=1353009 RepID=A0A1Y2J568_PYCCO) HSP 1 Score: 103 bits (257), Expect = 1.210e-22 Identity = 70/185 (37.84%), Postives = 88/185 (47.57%), Query Frame = 1 Query: 1 FRCEVSDGEHKMAMMLATALNDKVEASEVQTFSIVKLSKASINPVQGRLIVIALELEPISTQAGPVGGKMPIAAHGAFGTGDGGSXXXXXXXXXXXXXXXXXXXXXPSSTSHM-------------------ATQPIRTLNPYINRWAIKARVTKKGDIRTWSNARGEGKLFSVDLLDDEGGEIR 498 +R VSDGEH MLAT LN VE +V SI + K + N VQG+ ++I L + + +A +G P+ G+ G S P+ T A PI +L+PY N W IKARVT K DIRTWSN RGEGKLF+V L+ DE GEIR Sbjct: 51 YRVIVSDGEHFQQSMLATQLNHLVEEEQVLKHSIAVIEKFTCNLVQGKKLLIILAMRVLKKEAEKIGNPTPLQLRGSS---SGPSVEMQAQTPAVQSPAPSTFMNTPNVTXXXXXXXXXXXXXXXXXXXXRHAIYPIESLSPYQNHWTIKARVTAKSDIRTWSNQRGEGKLFNVTLM-DESGEIR 231
BLAST of mRNA_M-pyrifera_M_contig84780.19753.1 vs. uniprot
Match: A0A0D0AST5_9AGAM (Replication protein A subunit n=8 Tax=Suillus TaxID=5379 RepID=A0A0D0AST5_9AGAM) HSP 1 Score: 102 bits (255), Expect = 2.220e-22 Identity = 67/176 (38.07%), Postives = 86/176 (48.86%), Query Frame = 1 Query: 1 FRCEVSDGEHKMAMMLATALNDKVEASEVQTFSIVKLSKASINPVQGRLIVIALELEPISTQAGPVGGKM----------PIAAHGAFGTGDGGSXXXXXXXXXXXXXXXXXXXXXPSSTSHMATQPIRTLNPYINRWAIKARVTKKGDIRTWSNARGEGKLFSVDLLDDEGGEIR 498 FR +SDG H + MLAT LND V ++ ++V + K + N VQ + ++I L+L +S +G PIA A S PS + PI L+PY N W IKARVT+K DIRTWSN RGEGKLF+V L+ DE GEIR Sbjct: 50 FRIIISDGVHFVQAMLATQLNDLVANGDINKNTVVIIDKLACNFVQDKRLIIILDLHVVSRDEEKIGAPTAPPSTQDAPAPIALESA-------SSSVTATSSSTTPAKQTQPRTGPSGRGGRSVYPIEGLSPYQNNWTIKARVTQKSDIRTWSNQRGEGKLFNVTLM-DESGEIR 217
BLAST of mRNA_M-pyrifera_M_contig84780.19753.1 vs. uniprot
Match: A0A8H8LV33_9AGAM (Replication protein A subunit n=2 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8LV33_9AGAM) HSP 1 Score: 102 bits (254), Expect = 2.980e-22 Identity = 63/176 (35.80%), Postives = 86/176 (48.86%), Query Frame = 1 Query: 1 FRCEVSDGEHKMAMMLATALNDKVEASEVQTFSIVKLSKASINPVQGRLIVIALELEPISTQAGPVGGKMPIAAHGAFGTGDGGSXXXXXXXXXXXXXXXXXXXXXPSSTSHMATQ----------PIRTLNPYINRWAIKARVTKKGDIRTWSNARGEGKLFSVDLLDDEGGEIR 498 +R SDG+H MLAT LND + + I KL++ +IN VQ + ++I L LE + +G + + G + P AT PI L+PY N+W I+ARVT+K DIRTWSNARG+GKLF+V+L+DD G EIR Sbjct: 47 YRLVFSDGQHHCQSMLATKLNDYFVSQDFTPKCIFKLTRCAINLVQNKRLIITLGLEKLEDYPEKIGSPVSLDKSEGAANAGGSAMEVDPPAHTSPAVVPKPQAVQPQPKQAAATNSLPAGFAPLHPIEALSPYSNKWTIRARVTQKSDIRTWSNARGDGKLFNVNLMDDTG-EIR 221
BLAST of mRNA_M-pyrifera_M_contig84780.19753.1 vs. uniprot
Match: UPI0004417E63 (replication factor-a protein n=1 Tax=Punctularia strigosozonata (strain HHB-11173) TaxID=741275 RepID=UPI0004417E63) HSP 1 Score: 102 bits (253), Expect = 4.230e-22 Identity = 69/180 (38.33%), Postives = 87/180 (48.33%), Query Frame = 1 Query: 1 FRCEVSDGEHKMAMMLATALNDKVEASEVQTFSIVKLSKASINPVQGRLIVIALELEPISTQAGPVG--------------GKMPIAAHGAFGTGDGGSXXXXXXXXXXXXXXXXXXXXXPSSTSHMATQPIRTLNPYINRWAIKARVTKKGDIRTWSNARGEGKLFSVDLLDDEGGEIR 498 +R +SDGEH + MLAT LN +E + SIV L + + N VQ R ++I L+L P+ A +G G +P+A S S A PI L+PY N W IKARVT+K DIRTWSN RGEGKLF+V L+ DE GEIR Sbjct: 52 YRIIMSDGEHFVQAMLATQLNHLIEDETIGKHSIVVLDRFTANVVQERRLIIILDLTPVLKIAEKIGDPSAITLSDQPTTDGDVPMAETAPTPAPARASAPSVSNTVPPRSAPQRSTPGNKSGGRQSAILPIEGLSPYQNNWTIKARVTQKSDIRTWSNQRGEGKLFNVTLM-DESGEIR 230
BLAST of mRNA_M-pyrifera_M_contig84780.19753.1 vs. uniprot
Match: A0A4V2K9W7_9APHY (Replication protein A subunit n=4 Tax=Dichomitus squalens TaxID=114155 RepID=A0A4V2K9W7_9APHY) HSP 1 Score: 101 bits (252), Expect = 5.660e-22 Identity = 66/174 (37.93%), Postives = 88/174 (50.57%), Query Frame = 1 Query: 1 FRCEVSDGEHKMAMMLATALNDKVEASEVQTFSIVKLSKASINPVQGRLIVIALELEPISTQAGPVGGKMPIAAHGAFGTGDGGSXXXXXXXXXXXXXXXXXXXXXPSSTSHMATQ--------PIRTLNPYINRWAIKARVTKKGDIRTWSNARGEGKLFSVDLLDDEGGEIR 498 +R VSDGEH + MLAT +N VE ++ +I + K S+N VQG+ ++I L L+ + A +G + G + G+ P+ A + PI +L+PY W IKARVT K DIRTWSN RGEGKLFSV L+ DE GEIR Sbjct: 51 YRVIVSDGEHFLQSMLATQMNYIVEEDQIAKGTIATIEKFSVNLVQGKRLLIILALKVLVKHAEKIGSPKALQPRG-----EDGAPASAPVTPGPSTSTTPAAAAVPARQQTQAGRGGRAAAVYPIESLSPYQTHWTIKARVTNKSDIRTWSNQRGEGKLFSVTLM-DESGEIR 218
BLAST of mRNA_M-pyrifera_M_contig84780.19753.1 vs. uniprot
Match: A0A1M2VM47_TRAPU (Replication protein A subunit n=2 Tax=Trametes TaxID=5324 RepID=A0A1M2VM47_TRAPU) HSP 1 Score: 101 bits (252), Expect = 5.670e-22 Identity = 81/176 (46.02%), Postives = 104/176 (59.09%), Query Frame = 1 Query: 1 FRCEVSDGEHKMAMMLATALNDKVEASEVQTFSIVKLSKASINPVQGRLIVIALELEPISTQAGPVGGKMPIAAHGAFGTGDGGSXXXXXXXXXXXXXXXXXXXXXPSSTSHMATQ----------PIRTLNPYINRWAIKARVTKKGDIRTWSNARGEGKLFSVDLLDDEGGEIR 498 +R VSDGEH + MLAT LN VE ++ SI + K + N VQG+ ++I L L + +A +G + I A A G+ + + XXXXXXXXXXXXXX +S TQ PI +L+PY N W IKARV K +IRTWSN RGEGKLF++ L+ DE GEIR Sbjct: 50 YRVIVSDGEHFLQSMLATQLNHLVEEEQILKHSIAVIEKFTCNLVQGKKLLIILALRVVQKEAEKIGNPVGIQAR-AGGSIETQASPSAAVTXXXXXXXXXXXXXXXXQSSRQPTQGNRGGRTAIYPIESLSPYQNHWTIKARVIAKSEIRTWSNQRGEGKLFNITLM-DESGEIR 223 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84780.19753.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig84780.19753.1 >prot_M-pyrifera_M_contig84780.19753.1 ID=prot_M-pyrifera_M_contig84780.19753.1|Name=mRNA_M-pyrifera_M_contig84780.19753.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=166bp FRCEVSDGEHKMAMMLATALNDKVEASEVQTFSIVKLSKASINPVQGRLIback to top mRNA from alignment at M-pyrifera_M_contig84780:238..872+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig84780.19753.1 ID=mRNA_M-pyrifera_M_contig84780.19753.1|Name=mRNA_M-pyrifera_M_contig84780.19753.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=635bp|location=Sequence derived from alignment at M-pyrifera_M_contig84780:238..872+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig84780:238..872+ >mRNA_M-pyrifera_M_contig84780.19753.1 ID=mRNA_M-pyrifera_M_contig84780.19753.1|Name=mRNA_M-pyrifera_M_contig84780.19753.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=996bp|location=Sequence derived from alignment at M-pyrifera_M_contig84780:238..872+ (Macrocystis pyrifera P11B4 male)back to top |