prot_M-pyrifera_M_contig84780.19753.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig84780.19753.1
Unique Nameprot_M-pyrifera_M_contig84780.19753.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length166
Homology
BLAST of mRNA_M-pyrifera_M_contig84780.19753.1 vs. uniprot
Match: A0A137Q6I9_9AGAR (Replication protein A subunit n=1 Tax=Leucoagaricus sp. SymC.cos TaxID=1714833 RepID=A0A137Q6I9_9AGAR)

HSP 1 Score: 109 bits (273), Expect = 7.690e-25
Identity = 68/177 (38.42%), Postives = 97/177 (54.80%), Query Frame = 0
Query:    1 FRCEVSDGEHKMAMMLATALNDKVEASEVQTFSIVKLSKASINPVQGRLIVIALELEPISTQAGPVG-----------GKMPIAAHGAFGTGDGGSXXXXXXXXXXXXXXXXXXXXXPSSTSHMATQPIRTLNPYINRWAIKARVTKKGDIRTWSNARGEGKLFSVDLLDDEGGEIR 166
            +R  +SDGEH +  MLAT  N  VE+ E++ F++  + +AS N VQ + +VI L ++ + T +G +G           G+ P+      GT DG                        ++ +  +T PI  L+PY N W IKARVT+K DI+TWSN+RGEGKLF+V L+DD G EIR
Sbjct:   46 YRLIISDGEHFVQAMLATQCNGLVESDEIKKFTVATVDRASCNYVQQKRLVILLSVQVLGTPSGKIGNPKALDEPEKKGEAPMV-----GTSDGPKVKVEG-----------------NAENAPSTFPIEGLSPYQNNWTIKARVTQKSDIKTWSNSRGEGKLFNVTLMDDSG-EIR 199          
BLAST of mRNA_M-pyrifera_M_contig84780.19753.1 vs. uniprot
Match: A0A060SGP9_PYCCI (Replication protein A subunit n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SGP9_PYCCI)

HSP 1 Score: 107 bits (267), Expect = 5.360e-24
Identity = 72/188 (38.30%), Postives = 92/188 (48.94%), Query Frame = 0
Query:    1 FRCEVSDGEHKMAMMLATALNDKVEASEVQTFSIVKLSKASINPVQGRLIVIALELEPISTQAGPVGGKMPIAAHGAFGTGDGGSXXXXXXXXXXXXXXXXXXXXXPSSTSHMAT----------------------QPIRTLNPYINRWAIKARVTKKGDIRTWSNARGEGKLFSVDLLDDEGGEIR 166
            +R  VSDGEH +  MLAT LN  VE  +V   SI  + K + N VQG+ ++I L +  +  +A  +G   P+   G      GGS                      ++TS  AT                       PI +L+PY N W IKARVT+K DIRTWSN RGEGKLF+V L+ DE GEIR
Sbjct:   51 YRVIVSDGEHFLQSMLATQLNHLVEEEQVLKHSIAVIEKFTCNLVQGKKLLIILAMRVLKKEAEKIGSPTPVQPRG------GGSGPSVDMQPDTPTVPSPAPSTSVNTTSTPATVVPRAQPARQQTQAGRGGRSAIYPIESLSPYQNHWTIKARVTQKSDIRTWSNQRGEGKLFNVTLM-DESGEIR 231          
BLAST of mRNA_M-pyrifera_M_contig84780.19753.1 vs. uniprot
Match: K5XWA8_AGABU (Replication protein A subunit n=3 Tax=Agaricus bisporus TaxID=5341 RepID=K5XWA8_AGABU)

HSP 1 Score: 105 bits (261), Expect = 3.360e-23
Identity = 61/162 (37.65%), Postives = 84/162 (51.85%), Query Frame = 0
Query:    1 FRCEVSDGEHKMAMMLATALNDKVEASEVQTFSIVKLSKASINPVQGRLIVIALELEPISTQAGPVGGKMPIAAHGAFGTGDGGSXXXXXXXXXXXXXXXXXXXXXPSSTSHMATQPIRTLNPYINRWAIKARVTKKGDIRTWSNARGEGKLFSVDLLDDEG 162
            +R  +SDG++ +  MLAT  N  VE  +++ FS+  + +AS N VQG+ +VI L L  +      +          A    + G                        +TS +AT PI  L+PY N W IKARVT+K DI+ WSN+RGEGKLFSV L+DD G
Sbjct:   49 YRLIISDGKYYIQAMLATQCNSLVETDQIKKFSVAAIERASSNTVQGKRLVIVLSLRILGYPNEKINNPQ------ALDPVNSGPDQNASAEAPPAPAPGGSRQVNKPNTSGVATFPIENLSPYQNNWTIKARVTQKSDIKNWSNSRGEGKLFSVTLMDDSG 204          
BLAST of mRNA_M-pyrifera_M_contig84780.19753.1 vs. uniprot
Match: A0A1X2IIJ5_9FUNG (Replication protein A subunit n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2IIJ5_9FUNG)

HSP 1 Score: 103 bits (258), Expect = 8.610e-23
Identity = 76/177 (42.94%), Postives = 99/177 (55.93%), Query Frame = 0
Query:    1 FRCEVSDGEHKMAMMLATALNDKVEASEVQTFSIVKLSKASINPVQGRLIVIALELEPISTQAGPVGGKMPIAAHGAFGTGDGGSXXXXXXXXXXXXXXXXXXXXXPSSTSHMATQ-----------PIRTLNPYINRWAIKARVTKKGDIRTWSNARGEGKLFSVDLLDDEGGEIR 166
            +R  VSDG H M  MLA   +  ++  +++ FSIV+L++A  N    R I+I L L+ +ST      G+ P++  GA                XXXXXXX       SS S  AT            PI+ LNPY N+W IKARVT+K DI+TWSNAR EGKLFSV+LL D+ GEI+
Sbjct:   44 YRIIVSDGTHFMQAMLAAVHSPLIDEGQIKKFSIVRLTEAVCNEANNRKILIILHLDVVSTDTNGRIGE-PVSIEGAM------PAKQSAAPQXXXXXXXAQPLFMQSSGSSYATNSVNKQLEASLFPIKGLNPYQNKWVIKARVTQKSDIKTWSNARSEGKLFSVNLL-DQSGEIK 212          
BLAST of mRNA_M-pyrifera_M_contig84780.19753.1 vs. uniprot
Match: A0A1Y2J568_PYCCO (Replication protein A subunit n=1 Tax=Trametes coccinea BRFM310 TaxID=1353009 RepID=A0A1Y2J568_PYCCO)

HSP 1 Score: 103 bits (257), Expect = 1.210e-22
Identity = 70/185 (37.84%), Postives = 88/185 (47.57%), Query Frame = 0
Query:    1 FRCEVSDGEHKMAMMLATALNDKVEASEVQTFSIVKLSKASINPVQGRLIVIALELEPISTQAGPVGGKMPIAAHGAFGTGDGGSXXXXXXXXXXXXXXXXXXXXXPSSTSHM-------------------ATQPIRTLNPYINRWAIKARVTKKGDIRTWSNARGEGKLFSVDLLDDEGGEIR 166
            +R  VSDGEH    MLAT LN  VE  +V   SI  + K + N VQG+ ++I L +  +  +A  +G   P+   G+     G S                     P+ T                      A  PI +L+PY N W IKARVT K DIRTWSN RGEGKLF+V L+ DE GEIR
Sbjct:   51 YRVIVSDGEHFQQSMLATQLNHLVEEEQVLKHSIAVIEKFTCNLVQGKKLLIILAMRVLKKEAEKIGNPTPLQLRGSS---SGPSVEMQAQTPAVQSPAPSTFMNTPNVTXXXXXXXXXXXXXXXXXXXXRHAIYPIESLSPYQNHWTIKARVTAKSDIRTWSNQRGEGKLFNVTLM-DESGEIR 231          
BLAST of mRNA_M-pyrifera_M_contig84780.19753.1 vs. uniprot
Match: A0A0D0AST5_9AGAM (Replication protein A subunit n=8 Tax=Suillus TaxID=5379 RepID=A0A0D0AST5_9AGAM)

HSP 1 Score: 102 bits (255), Expect = 2.220e-22
Identity = 67/176 (38.07%), Postives = 86/176 (48.86%), Query Frame = 0
Query:    1 FRCEVSDGEHKMAMMLATALNDKVEASEVQTFSIVKLSKASINPVQGRLIVIALELEPISTQAGPVGGKM----------PIAAHGAFGTGDGGSXXXXXXXXXXXXXXXXXXXXXPSSTSHMATQPIRTLNPYINRWAIKARVTKKGDIRTWSNARGEGKLFSVDLLDDEGGEIR 166
            FR  +SDG H +  MLAT LND V   ++   ++V + K + N VQ + ++I L+L  +S     +G             PIA   A       S                     PS     +  PI  L+PY N W IKARVT+K DIRTWSN RGEGKLF+V L+ DE GEIR
Sbjct:   50 FRIIISDGVHFVQAMLATQLNDLVANGDINKNTVVIIDKLACNFVQDKRLIIILDLHVVSRDEEKIGAPTAPPSTQDAPAPIALESA-------SSSVTATSSSTTPAKQTQPRTGPSGRGGRSVYPIEGLSPYQNNWTIKARVTQKSDIRTWSNQRGEGKLFNVTLM-DESGEIR 217          
BLAST of mRNA_M-pyrifera_M_contig84780.19753.1 vs. uniprot
Match: A0A8H8LV33_9AGAM (Replication protein A subunit n=2 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8LV33_9AGAM)

HSP 1 Score: 102 bits (254), Expect = 2.980e-22
Identity = 63/176 (35.80%), Postives = 86/176 (48.86%), Query Frame = 0
Query:    1 FRCEVSDGEHKMAMMLATALNDKVEASEVQTFSIVKLSKASINPVQGRLIVIALELEPISTQAGPVGGKMPIAAHGAFGTGDGGSXXXXXXXXXXXXXXXXXXXXXPSSTSHMATQ----------PIRTLNPYINRWAIKARVTKKGDIRTWSNARGEGKLFSVDLLDDEGGEIR 166
            +R   SDG+H    MLAT LND   + +     I KL++ +IN VQ + ++I L LE +      +G  + +          G +                     P      AT           PI  L+PY N+W I+ARVT+K DIRTWSNARG+GKLF+V+L+DD G EIR
Sbjct:   47 YRLVFSDGQHHCQSMLATKLNDYFVSQDFTPKCIFKLTRCAINLVQNKRLIITLGLEKLEDYPEKIGSPVSLDKSEGAANAGGSAMEVDPPAHTSPAVVPKPQAVQPQPKQAAATNSLPAGFAPLHPIEALSPYSNKWTIRARVTQKSDIRTWSNARGDGKLFNVNLMDDTG-EIR 221          
BLAST of mRNA_M-pyrifera_M_contig84780.19753.1 vs. uniprot
Match: UPI0004417E63 (replication factor-a protein n=1 Tax=Punctularia strigosozonata (strain HHB-11173) TaxID=741275 RepID=UPI0004417E63)

HSP 1 Score: 102 bits (253), Expect = 4.230e-22
Identity = 69/180 (38.33%), Postives = 87/180 (48.33%), Query Frame = 0
Query:    1 FRCEVSDGEHKMAMMLATALNDKVEASEVQTFSIVKLSKASINPVQGRLIVIALELEPISTQAGPVG--------------GKMPIAAHGAFGTGDGGSXXXXXXXXXXXXXXXXXXXXXPSSTSHMATQPIRTLNPYINRWAIKARVTKKGDIRTWSNARGEGKLFSVDLLDDEGGEIR 166
            +R  +SDGEH +  MLAT LN  +E   +   SIV L + + N VQ R ++I L+L P+   A  +G              G +P+A           S                      S     A  PI  L+PY N W IKARVT+K DIRTWSN RGEGKLF+V L+ DE GEIR
Sbjct:   52 YRIIMSDGEHFVQAMLATQLNHLIEDETIGKHSIVVLDRFTANVVQERRLIIILDLTPVLKIAEKIGDPSAITLSDQPTTDGDVPMAETAPTPAPARASAPSVSNTVPPRSAPQRSTPGNKSGGRQSAILPIEGLSPYQNNWTIKARVTQKSDIRTWSNQRGEGKLFNVTLM-DESGEIR 230          
BLAST of mRNA_M-pyrifera_M_contig84780.19753.1 vs. uniprot
Match: A0A4V2K9W7_9APHY (Replication protein A subunit n=4 Tax=Dichomitus squalens TaxID=114155 RepID=A0A4V2K9W7_9APHY)

HSP 1 Score: 101 bits (252), Expect = 5.660e-22
Identity = 66/174 (37.93%), Postives = 88/174 (50.57%), Query Frame = 0
Query:    1 FRCEVSDGEHKMAMMLATALNDKVEASEVQTFSIVKLSKASINPVQGRLIVIALELEPISTQAGPVGGKMPIAAHGAFGTGDGGSXXXXXXXXXXXXXXXXXXXXXPSSTSHMATQ--------PIRTLNPYINRWAIKARVTKKGDIRTWSNARGEGKLFSVDLLDDEGGEIR 166
            +R  VSDGEH +  MLAT +N  VE  ++   +I  + K S+N VQG+ ++I L L+ +   A  +G    +   G     + G+                     P+     A +        PI +L+PY   W IKARVT K DIRTWSN RGEGKLFSV L+ DE GEIR
Sbjct:   51 YRVIVSDGEHFLQSMLATQMNYIVEEDQIAKGTIATIEKFSVNLVQGKRLLIILALKVLVKHAEKIGSPKALQPRG-----EDGAPASAPVTPGPSTSTTPAAAAVPARQQTQAGRGGRAAAVYPIESLSPYQTHWTIKARVTNKSDIRTWSNQRGEGKLFSVTLM-DESGEIR 218          
BLAST of mRNA_M-pyrifera_M_contig84780.19753.1 vs. uniprot
Match: A0A1M2VM47_TRAPU (Replication protein A subunit n=2 Tax=Trametes TaxID=5324 RepID=A0A1M2VM47_TRAPU)

HSP 1 Score: 101 bits (252), Expect = 5.670e-22
Identity = 81/176 (46.02%), Postives = 104/176 (59.09%), Query Frame = 0
Query:    1 FRCEVSDGEHKMAMMLATALNDKVEASEVQTFSIVKLSKASINPVQGRLIVIALELEPISTQAGPVGGKMPIAAHGAFGTGDGGSXXXXXXXXXXXXXXXXXXXXXPSSTSHMATQ----------PIRTLNPYINRWAIKARVTKKGDIRTWSNARGEGKLFSVDLLDDEGGEIR 166
            +R  VSDGEH +  MLAT LN  VE  ++   SI  + K + N VQG+ ++I L L  +  +A  +G  + I A  A G+ +  +       XXXXXXXXXXXXXX   +S   TQ          PI +L+PY N W IKARV  K +IRTWSN RGEGKLF++ L+ DE GEIR
Sbjct:   50 YRVIVSDGEHFLQSMLATQLNHLVEEEQILKHSIAVIEKFTCNLVQGKKLLIILALRVVQKEAEKIGNPVGIQAR-AGGSIETQASPSAAVTXXXXXXXXXXXXXXXXQSSRQPTQGNRGGRTAIYPIESLSPYQNHWTIKARVIAKSEIRTWSNQRGEGKLFNITLM-DESGEIR 223          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84780.19753.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A137Q6I9_9AGAR7.690e-2538.42Replication protein A subunit n=1 Tax=Leucoagaricu... [more]
A0A060SGP9_PYCCI5.360e-2438.30Replication protein A subunit n=1 Tax=Pycnoporus c... [more]
K5XWA8_AGABU3.360e-2337.65Replication protein A subunit n=3 Tax=Agaricus bis... [more]
A0A1X2IIJ5_9FUNG8.610e-2342.94Replication protein A subunit n=1 Tax=Absidia repe... [more]
A0A1Y2J568_PYCCO1.210e-2237.84Replication protein A subunit n=1 Tax=Trametes coc... [more]
A0A0D0AST5_9AGAM2.220e-2238.07Replication protein A subunit n=8 Tax=Suillus TaxI... [more]
A0A8H8LV33_9AGAM2.980e-2235.80Replication protein A subunit n=2 Tax=Ceratobasidi... [more]
UPI0004417E634.230e-2238.33replication factor-a protein n=1 Tax=Punctularia s... [more]
A0A4V2K9W7_9APHY5.660e-2237.93Replication protein A subunit n=4 Tax=Dichomitus s... [more]
A0A1M2VM47_TRAPU5.670e-2246.02Replication protein A subunit n=2 Tax=Trametes Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.140coord: 1..72
e-value: 1.5E-13
score: 52.6
NoneNo IPR availableGENE3D2.40.50.140coord: 114..166
e-value: 2.4E-16
score: 61.8
NoneNo IPR availablePANTHERPTHR23273REPLICATION FACTOR A 1, RFA1coord: 1..166
NoneNo IPR availablePANTHERPTHR23273:SF4REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNITcoord: 1..166
IPR007199Replication factor-A protein 1, N-terminalPFAMPF04057Rep-A_Ncoord: 1..59
e-value: 1.3E-9
score: 38.0
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 1..61
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 114..166

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig84780contigM-pyrifera_M_contig84780:238..872 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig84780.19753.1mRNA_M-pyrifera_M_contig84780.19753.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig84780 238..872 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig84780.19753.1 ID=prot_M-pyrifera_M_contig84780.19753.1|Name=mRNA_M-pyrifera_M_contig84780.19753.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=166bp
FRCEVSDGEHKMAMMLATALNDKVEASEVQTFSIVKLSKASINPVQGRLI
VIALELEPISTQAGPVGGKMPIAAHGAFGTGDGGSGGAAAGGGAASAAAS
ASSTSAPSSTSHMATQPIRTLNPYINRWAIKARVTKKGDIRTWSNARGEG
KLFSVDLLDDEGGEIR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007199Rep_factor-A_N
IPR012340NA-bd_OB-fold