mRNA_M-pyrifera_M_contig84780.19753.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig84780.19753.1
Unique NamemRNA_M-pyrifera_M_contig84780.19753.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig84780.19753.1 vs. uniprot
Match: A0A137Q6I9_9AGAR (Replication protein A subunit n=1 Tax=Leucoagaricus sp. SymC.cos TaxID=1714833 RepID=A0A137Q6I9_9AGAR)

HSP 1 Score: 109 bits (273), Expect = 7.690e-25
Identity = 68/177 (38.42%), Postives = 97/177 (54.80%), Query Frame = 1
Query:    1 FRCEVSDGEHKMAMMLATALNDKVEASEVQTFSIVKLSKASINPVQGRLIVIALELEPISTQAGPVG-----------GKMPIAAHGAFGTGDGGSXXXXXXXXXXXXXXXXXXXXXPSSTSHMATQPIRTLNPYINRWAIKARVTKKGDIRTWSNARGEGKLFSVDLLDDEGGEIR 498
            +R  +SDGEH +  MLAT  N  VE+ E++ F++  + +AS N VQ + +VI L ++ + T +G +G           G+ P+      GT DG                        ++ +  +T PI  L+PY N W IKARVT+K DI+TWSN+RGEGKLF+V L+DD G EIR
Sbjct:   46 YRLIISDGEHFVQAMLATQCNGLVESDEIKKFTVATVDRASCNYVQQKRLVILLSVQVLGTPSGKIGNPKALDEPEKKGEAPMV-----GTSDGPKVKVEG-----------------NAENAPSTFPIEGLSPYQNNWTIKARVTQKSDIKTWSNSRGEGKLFNVTLMDDSG-EIR 199          
BLAST of mRNA_M-pyrifera_M_contig84780.19753.1 vs. uniprot
Match: A0A060SGP9_PYCCI (Replication protein A subunit n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SGP9_PYCCI)

HSP 1 Score: 107 bits (267), Expect = 5.360e-24
Identity = 72/188 (38.30%), Postives = 92/188 (48.94%), Query Frame = 1
Query:    1 FRCEVSDGEHKMAMMLATALNDKVEASEVQTFSIVKLSKASINPVQGRLIVIALELEPISTQAGPVGGKMPIAAHGAFGTGDGGSXXXXXXXXXXXXXXXXXXXXXPSSTSHMAT----------------------QPIRTLNPYINRWAIKARVTKKGDIRTWSNARGEGKLFSVDLLDDEGGEIR 498
            +R  VSDGEH +  MLAT LN  VE  +V   SI  + K + N VQG+ ++I L +  +  +A  +G   P+   G      GGS                      ++TS  AT                       PI +L+PY N W IKARVT+K DIRTWSN RGEGKLF+V L+ DE GEIR
Sbjct:   51 YRVIVSDGEHFLQSMLATQLNHLVEEEQVLKHSIAVIEKFTCNLVQGKKLLIILAMRVLKKEAEKIGSPTPVQPRG------GGSGPSVDMQPDTPTVPSPAPSTSVNTTSTPATVVPRAQPARQQTQAGRGGRSAIYPIESLSPYQNHWTIKARVTQKSDIRTWSNQRGEGKLFNVTLM-DESGEIR 231          
BLAST of mRNA_M-pyrifera_M_contig84780.19753.1 vs. uniprot
Match: K5XWA8_AGABU (Replication protein A subunit n=3 Tax=Agaricus bisporus TaxID=5341 RepID=K5XWA8_AGABU)

HSP 1 Score: 105 bits (261), Expect = 3.360e-23
Identity = 61/162 (37.65%), Postives = 84/162 (51.85%), Query Frame = 1
Query:    1 FRCEVSDGEHKMAMMLATALNDKVEASEVQTFSIVKLSKASINPVQGRLIVIALELEPISTQAGPVGGKMPIAAHGAFGTGDGGSXXXXXXXXXXXXXXXXXXXXXPSSTSHMATQPIRTLNPYINRWAIKARVTKKGDIRTWSNARGEGKLFSVDLLDDEG 486
            +R  +SDG++ +  MLAT  N  VE  +++ FS+  + +AS N VQG+ +VI L L  +      +          A    + G                        +TS +AT PI  L+PY N W IKARVT+K DI+ WSN+RGEGKLFSV L+DD G
Sbjct:   49 YRLIISDGKYYIQAMLATQCNSLVETDQIKKFSVAAIERASSNTVQGKRLVIVLSLRILGYPNEKINNPQ------ALDPVNSGPDQNASAEAPPAPAPGGSRQVNKPNTSGVATFPIENLSPYQNNWTIKARVTQKSDIKNWSNSRGEGKLFSVTLMDDSG 204          
BLAST of mRNA_M-pyrifera_M_contig84780.19753.1 vs. uniprot
Match: A0A1X2IIJ5_9FUNG (Replication protein A subunit n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2IIJ5_9FUNG)

HSP 1 Score: 103 bits (258), Expect = 8.610e-23
Identity = 76/177 (42.94%), Postives = 99/177 (55.93%), Query Frame = 1
Query:    1 FRCEVSDGEHKMAMMLATALNDKVEASEVQTFSIVKLSKASINPVQGRLIVIALELEPISTQAGPVGGKMPIAAHGAFGTGDGGSXXXXXXXXXXXXXXXXXXXXXPSSTSHMATQ-----------PIRTLNPYINRWAIKARVTKKGDIRTWSNARGEGKLFSVDLLDDEGGEIR 498
            +R  VSDG H M  MLA   +  ++  +++ FSIV+L++A  N    R I+I L L+ +ST      G+ P++  GA                XXXXXXX       SS S  AT            PI+ LNPY N+W IKARVT+K DI+TWSNAR EGKLFSV+LL D+ GEI+
Sbjct:   44 YRIIVSDGTHFMQAMLAAVHSPLIDEGQIKKFSIVRLTEAVCNEANNRKILIILHLDVVSTDTNGRIGE-PVSIEGAM------PAKQSAAPQXXXXXXXAQPLFMQSSGSSYATNSVNKQLEASLFPIKGLNPYQNKWVIKARVTQKSDIKTWSNARSEGKLFSVNLL-DQSGEIK 212          
BLAST of mRNA_M-pyrifera_M_contig84780.19753.1 vs. uniprot
Match: A0A1Y2J568_PYCCO (Replication protein A subunit n=1 Tax=Trametes coccinea BRFM310 TaxID=1353009 RepID=A0A1Y2J568_PYCCO)

HSP 1 Score: 103 bits (257), Expect = 1.210e-22
Identity = 70/185 (37.84%), Postives = 88/185 (47.57%), Query Frame = 1
Query:    1 FRCEVSDGEHKMAMMLATALNDKVEASEVQTFSIVKLSKASINPVQGRLIVIALELEPISTQAGPVGGKMPIAAHGAFGTGDGGSXXXXXXXXXXXXXXXXXXXXXPSSTSHM-------------------ATQPIRTLNPYINRWAIKARVTKKGDIRTWSNARGEGKLFSVDLLDDEGGEIR 498
            +R  VSDGEH    MLAT LN  VE  +V   SI  + K + N VQG+ ++I L +  +  +A  +G   P+   G+     G S                     P+ T                      A  PI +L+PY N W IKARVT K DIRTWSN RGEGKLF+V L+ DE GEIR
Sbjct:   51 YRVIVSDGEHFQQSMLATQLNHLVEEEQVLKHSIAVIEKFTCNLVQGKKLLIILAMRVLKKEAEKIGNPTPLQLRGSS---SGPSVEMQAQTPAVQSPAPSTFMNTPNVTXXXXXXXXXXXXXXXXXXXXRHAIYPIESLSPYQNHWTIKARVTAKSDIRTWSNQRGEGKLFNVTLM-DESGEIR 231          
BLAST of mRNA_M-pyrifera_M_contig84780.19753.1 vs. uniprot
Match: A0A0D0AST5_9AGAM (Replication protein A subunit n=8 Tax=Suillus TaxID=5379 RepID=A0A0D0AST5_9AGAM)

HSP 1 Score: 102 bits (255), Expect = 2.220e-22
Identity = 67/176 (38.07%), Postives = 86/176 (48.86%), Query Frame = 1
Query:    1 FRCEVSDGEHKMAMMLATALNDKVEASEVQTFSIVKLSKASINPVQGRLIVIALELEPISTQAGPVGGKM----------PIAAHGAFGTGDGGSXXXXXXXXXXXXXXXXXXXXXPSSTSHMATQPIRTLNPYINRWAIKARVTKKGDIRTWSNARGEGKLFSVDLLDDEGGEIR 498
            FR  +SDG H +  MLAT LND V   ++   ++V + K + N VQ + ++I L+L  +S     +G             PIA   A       S                     PS     +  PI  L+PY N W IKARVT+K DIRTWSN RGEGKLF+V L+ DE GEIR
Sbjct:   50 FRIIISDGVHFVQAMLATQLNDLVANGDINKNTVVIIDKLACNFVQDKRLIIILDLHVVSRDEEKIGAPTAPPSTQDAPAPIALESA-------SSSVTATSSSTTPAKQTQPRTGPSGRGGRSVYPIEGLSPYQNNWTIKARVTQKSDIRTWSNQRGEGKLFNVTLM-DESGEIR 217          
BLAST of mRNA_M-pyrifera_M_contig84780.19753.1 vs. uniprot
Match: A0A8H8LV33_9AGAM (Replication protein A subunit n=2 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8LV33_9AGAM)

HSP 1 Score: 102 bits (254), Expect = 2.980e-22
Identity = 63/176 (35.80%), Postives = 86/176 (48.86%), Query Frame = 1
Query:    1 FRCEVSDGEHKMAMMLATALNDKVEASEVQTFSIVKLSKASINPVQGRLIVIALELEPISTQAGPVGGKMPIAAHGAFGTGDGGSXXXXXXXXXXXXXXXXXXXXXPSSTSHMATQ----------PIRTLNPYINRWAIKARVTKKGDIRTWSNARGEGKLFSVDLLDDEGGEIR 498
            +R   SDG+H    MLAT LND   + +     I KL++ +IN VQ + ++I L LE +      +G  + +          G +                     P      AT           PI  L+PY N+W I+ARVT+K DIRTWSNARG+GKLF+V+L+DD G EIR
Sbjct:   47 YRLVFSDGQHHCQSMLATKLNDYFVSQDFTPKCIFKLTRCAINLVQNKRLIITLGLEKLEDYPEKIGSPVSLDKSEGAANAGGSAMEVDPPAHTSPAVVPKPQAVQPQPKQAAATNSLPAGFAPLHPIEALSPYSNKWTIRARVTQKSDIRTWSNARGDGKLFNVNLMDDTG-EIR 221          
BLAST of mRNA_M-pyrifera_M_contig84780.19753.1 vs. uniprot
Match: UPI0004417E63 (replication factor-a protein n=1 Tax=Punctularia strigosozonata (strain HHB-11173) TaxID=741275 RepID=UPI0004417E63)

HSP 1 Score: 102 bits (253), Expect = 4.230e-22
Identity = 69/180 (38.33%), Postives = 87/180 (48.33%), Query Frame = 1
Query:    1 FRCEVSDGEHKMAMMLATALNDKVEASEVQTFSIVKLSKASINPVQGRLIVIALELEPISTQAGPVG--------------GKMPIAAHGAFGTGDGGSXXXXXXXXXXXXXXXXXXXXXPSSTSHMATQPIRTLNPYINRWAIKARVTKKGDIRTWSNARGEGKLFSVDLLDDEGGEIR 498
            +R  +SDGEH +  MLAT LN  +E   +   SIV L + + N VQ R ++I L+L P+   A  +G              G +P+A           S                      S     A  PI  L+PY N W IKARVT+K DIRTWSN RGEGKLF+V L+ DE GEIR
Sbjct:   52 YRIIMSDGEHFVQAMLATQLNHLIEDETIGKHSIVVLDRFTANVVQERRLIIILDLTPVLKIAEKIGDPSAITLSDQPTTDGDVPMAETAPTPAPARASAPSVSNTVPPRSAPQRSTPGNKSGGRQSAILPIEGLSPYQNNWTIKARVTQKSDIRTWSNQRGEGKLFNVTLM-DESGEIR 230          
BLAST of mRNA_M-pyrifera_M_contig84780.19753.1 vs. uniprot
Match: A0A4V2K9W7_9APHY (Replication protein A subunit n=4 Tax=Dichomitus squalens TaxID=114155 RepID=A0A4V2K9W7_9APHY)

HSP 1 Score: 101 bits (252), Expect = 5.660e-22
Identity = 66/174 (37.93%), Postives = 88/174 (50.57%), Query Frame = 1
Query:    1 FRCEVSDGEHKMAMMLATALNDKVEASEVQTFSIVKLSKASINPVQGRLIVIALELEPISTQAGPVGGKMPIAAHGAFGTGDGGSXXXXXXXXXXXXXXXXXXXXXPSSTSHMATQ--------PIRTLNPYINRWAIKARVTKKGDIRTWSNARGEGKLFSVDLLDDEGGEIR 498
            +R  VSDGEH +  MLAT +N  VE  ++   +I  + K S+N VQG+ ++I L L+ +   A  +G    +   G     + G+                     P+     A +        PI +L+PY   W IKARVT K DIRTWSN RGEGKLFSV L+ DE GEIR
Sbjct:   51 YRVIVSDGEHFLQSMLATQMNYIVEEDQIAKGTIATIEKFSVNLVQGKRLLIILALKVLVKHAEKIGSPKALQPRG-----EDGAPASAPVTPGPSTSTTPAAAAVPARQQTQAGRGGRAAAVYPIESLSPYQTHWTIKARVTNKSDIRTWSNQRGEGKLFSVTLM-DESGEIR 218          
BLAST of mRNA_M-pyrifera_M_contig84780.19753.1 vs. uniprot
Match: A0A1M2VM47_TRAPU (Replication protein A subunit n=2 Tax=Trametes TaxID=5324 RepID=A0A1M2VM47_TRAPU)

HSP 1 Score: 101 bits (252), Expect = 5.670e-22
Identity = 81/176 (46.02%), Postives = 104/176 (59.09%), Query Frame = 1
Query:    1 FRCEVSDGEHKMAMMLATALNDKVEASEVQTFSIVKLSKASINPVQGRLIVIALELEPISTQAGPVGGKMPIAAHGAFGTGDGGSXXXXXXXXXXXXXXXXXXXXXPSSTSHMATQ----------PIRTLNPYINRWAIKARVTKKGDIRTWSNARGEGKLFSVDLLDDEGGEIR 498
            +R  VSDGEH +  MLAT LN  VE  ++   SI  + K + N VQG+ ++I L L  +  +A  +G  + I A  A G+ +  +       XXXXXXXXXXXXXX   +S   TQ          PI +L+PY N W IKARV  K +IRTWSN RGEGKLF++ L+ DE GEIR
Sbjct:   50 YRVIVSDGEHFLQSMLATQLNHLVEEEQILKHSIAVIEKFTCNLVQGKKLLIILALRVVQKEAEKIGNPVGIQAR-AGGSIETQASPSAAVTXXXXXXXXXXXXXXXXQSSRQPTQGNRGGRTAIYPIESLSPYQNHWTIKARVIAKSEIRTWSNQRGEGKLFNITLM-DESGEIR 223          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84780.19753.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A137Q6I9_9AGAR7.690e-2538.42Replication protein A subunit n=1 Tax=Leucoagaricu... [more]
A0A060SGP9_PYCCI5.360e-2438.30Replication protein A subunit n=1 Tax=Pycnoporus c... [more]
K5XWA8_AGABU3.360e-2337.65Replication protein A subunit n=3 Tax=Agaricus bis... [more]
A0A1X2IIJ5_9FUNG8.610e-2342.94Replication protein A subunit n=1 Tax=Absidia repe... [more]
A0A1Y2J568_PYCCO1.210e-2237.84Replication protein A subunit n=1 Tax=Trametes coc... [more]
A0A0D0AST5_9AGAM2.220e-2238.07Replication protein A subunit n=8 Tax=Suillus TaxI... [more]
A0A8H8LV33_9AGAM2.980e-2235.80Replication protein A subunit n=2 Tax=Ceratobasidi... [more]
UPI0004417E634.230e-2238.33replication factor-a protein n=1 Tax=Punctularia s... [more]
A0A4V2K9W7_9APHY5.660e-2237.93Replication protein A subunit n=4 Tax=Dichomitus s... [more]
A0A1M2VM47_TRAPU5.670e-2246.02Replication protein A subunit n=2 Tax=Trametes Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig84780contigM-pyrifera_M_contig84780:238..872 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score110.5
Seed ortholog evalue7.4e-22
Seed eggNOG ortholog227086.JGI_V11_145664
Preferred nameRFA1
KEGG koko:K07466
KEGG Pathwayko03030,ko03420,ko03430,ko03440,ko03460,map03030,map03420,map03430,map03440,map03460
KEGG ModuleM00288
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000228,GO:0000278,GO:0000280,GO:0000722,GO:0000723,GO:0000724,GO:0000725,GO:0000781,GO:0000784,GO:0000785,GO:0000790,GO:0000793,GO:0000794,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003697,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005657,GO:0005662,GO:0005694,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006265,GO:0006268,GO:0006278,GO:0006279,GO:0006281,GO:0006289,GO:0006302,GO:0006310,GO:0006312,GO:0006464,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007004,GO:0007049,GO:0007059,GO:0007063,GO:0007088,GO:0007127,GO:0007129,GO:0007131,GO:0007140,GO:0007141,GO:0007275,GO:0007276,GO:0007346,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009555,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010556,GO:0010557,GO:0010564,GO:0010604,GO:0010638,GO:0010639,GO:0010833,GO:0010948,GO:0016043,GO:0016567,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0030491,GO:0030894,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0032200,GO:0032204,GO:0032206,GO:0032210,GO:0032212,GO:0032392,GO:0032446,GO:0032501,GO:0032502,GO:0032504,GO:0032508,GO:0032879,GO:0032880,GO:0032991,GO:0032993,GO:0033036,GO:0033043,GO:0033044,GO:0033045,GO:0033046,GO:0033047,GO:0033048,GO:0033260,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0035825,GO:0035861,GO:0036211,GO:0042162,GO:0042592,GO:0043047,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043565,GO:0043596,GO:0043601,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0044703,GO:0044786,GO:0045132,GO:0045143,GO:0045184,GO:0045786,GO:0045839,GO:0045875,GO:0045930,GO:0045935,GO:0046483,GO:0048229,GO:0048232,GO:0048285,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048609,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051026,GO:0051052,GO:0051054,GO:0051098,GO:0051101,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051276,GO:0051321,GO:0051704,GO:0051716,GO:0051726,GO:0051783,GO:0051784,GO:0051983,GO:0051985,GO:0060249,GO:0060255,GO:0060341,GO:0061982,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070034,GO:0070192,GO:0070647,GO:0071103,GO:0071704,GO:0071840,GO:0071897,GO:0071922,GO:0071923,GO:0080090,GO:0090304,GO:0090734,GO:0097159,GO:0098687,GO:0098813,GO:0098847,GO:0106111,GO:0106112,GO:0140013,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901576,GO:1902969,GO:1903046,GO:1903047,GO:1903827,GO:1903828,GO:1904356,GO:1904358,GO:1905405,GO:1905412,GO:1905634,GO:2000112,GO:2000278,GO:2000573,GO:2001251,GO:2001252
EggNOG free text desc.DNA recombination
EggNOG OGsCOG1599@1,KOG0851@2759
Ec32 ortholog descriptionNucleic acid-binding, OB-fold
Ec32 orthologEc-06_001110.1
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03000,ko03032,ko03400
Exons2
Model size498
Cds size498
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816754.7012224-CDS-M-pyrifera_M_contig84780:237..3031622816754.7012224-CDS-M-pyrifera_M_contig84780:237..303Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84780 238..303 +
1692278158.7340631-CDS-M-pyrifera_M_contig84780:237..3031692278158.7340631-CDS-M-pyrifera_M_contig84780:237..303Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84780 238..303 +
1622816754.7137232-CDS-M-pyrifera_M_contig84780:440..8721622816754.7137232-CDS-M-pyrifera_M_contig84780:440..872Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84780 441..872 +
1692278158.7607229-CDS-M-pyrifera_M_contig84780:440..8721692278158.7607229-CDS-M-pyrifera_M_contig84780:440..872Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84780 441..872 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig84780.19753.1prot_M-pyrifera_M_contig84780.19753.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig84780 238..872 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig84780.19753.1

>prot_M-pyrifera_M_contig84780.19753.1 ID=prot_M-pyrifera_M_contig84780.19753.1|Name=mRNA_M-pyrifera_M_contig84780.19753.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=166bp
FRCEVSDGEHKMAMMLATALNDKVEASEVQTFSIVKLSKASINPVQGRLI
VIALELEPISTQAGPVGGKMPIAAHGAFGTGDGGSGGAAAGGGAASAAAS
ASSTSAPSSTSHMATQPIRTLNPYINRWAIKARVTKKGDIRTWSNARGEG
KLFSVDLLDDEGGEIR
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mRNA from alignment at M-pyrifera_M_contig84780:238..872+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig84780.19753.1 ID=mRNA_M-pyrifera_M_contig84780.19753.1|Name=mRNA_M-pyrifera_M_contig84780.19753.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=635bp|location=Sequence derived from alignment at M-pyrifera_M_contig84780:238..872+ (Macrocystis pyrifera P11B4 male)
TTCAGATGCGAAGTGAGCGATGGAGAGCACAAGATGGCAATGATGCTTGC CACTGCCTTGAATGACGTACGTGTGGGGTTTGGATGAGGGTGGTAGGGAA TGGTGAAGAAGGGTTGGGAGGGGTGAATGGGTGGGGGGAAGTTTGGAGGT GTTGGGGTTTTGAGGGATTCGCGTATGGTTTTGGTGTTGTTGGATGGTTG CAGAAGGTGGAGGCATCAGAGGTGCAAACATTTTCGATTGTGAAATTGAG CAAGGCATCCATTAACCCCGTGCAAGGGAGGTTGATTGTGATTGCGCTGG AATTAGAGCCTATTTCAACACAAGCAGGGCCAGTAGGTGGCAAGATGCCT ATTGCAGCACATGGTGCATTTGGTACAGGGGATGGTGGGAGTGGAGGAGC AGCTGCAGGTGGTGGAGCGGCAAGTGCTGCAGCATCTGCTTCTTCCACCT CTGCCCCATCTTCCACATCTCATATGGCTACTCAACCTATCCGTACACTC AACCCTTACATCAACAGATGGGCAATCAAGGCAAGAGTAACCAAGAAAGG AGATATTCGGACTTGGTCAAATGCTCGTGGGGAAGGAAAGCTCTTTTCCG TCGACCTTTTGGACGATGAAGGTGGAGAAATTCGC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig84780:238..872+

>mRNA_M-pyrifera_M_contig84780.19753.1 ID=mRNA_M-pyrifera_M_contig84780.19753.1|Name=mRNA_M-pyrifera_M_contig84780.19753.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=996bp|location=Sequence derived from alignment at M-pyrifera_M_contig84780:238..872+ (Macrocystis pyrifera P11B4 male)
TTCAGATGCGAAGTGAGCGATGGAGAGCACAAGATGGCAATGATGCTTGC
CACTGCCTTGAATGACTTCAGATGCGAAGTGAGCGATGGAGAGCACAAGA
TGGCAATGATGCTTGCCACTGCCTTGAATGACAAGGTGGAGGCATCAGAG
GTGCAAACATTTTCGATTGTGAAATTGAGCAAGGCATCCATTAACCCCGT
GCAAGGGAGGTTGATTGTGATTGCGCTGGAATTAGAGCCTATTTCAACAC
AAGCAGGGCCAGTAGGTGGCAAGATGCCTATTGCAGCACATGGTGCATTT
GGTACAGGGGATGGTGGGAGTGGAGGAGCAGCTGCAGGTGGTGGAGCGGC
AAGTGCTGCAGCATCTGCTTCTTCCACCTCTGCCCCATCTTCCACATCTC
ATATGGCTACTCAACCTATCCGTACACTCAACCCTTACATCAACAGATGG
GCAATCAAGGCAAGAGTAACCAAGAAAGGAGATATTCGGACTTGGTCAAA
TGCTCGTGGGGAAGGAAAGCTCTTTTCCGTCGACCTTTTGGACGATGAAG
GTGGAGAAATTCGCAAGGTGGAGGCATCAGAGGTGCAAACATTTTCGATT
GTGAAATTGAGCAAGGCATCCATTAACCCCGTGCAAGGGAGGTTGATTGT
GATTGCGCTGGAATTAGAGCCTATTTCAACACAAGCAGGGCCAGTAGGTG
GCAAGATGCCTATTGCAGCACATGGTGCATTTGGTACAGGGGATGGTGGG
AGTGGAGGAGCAGCTGCAGGTGGTGGAGCGGCAAGTGCTGCAGCATCTGC
TTCTTCCACCTCTGCCCCATCTTCCACATCTCATATGGCTACTCAACCTA
TCCGTACACTCAACCCTTACATCAACAGATGGGCAATCAAGGCAAGAGTA
ACCAAGAAAGGAGATATTCGGACTTGGTCAAATGCTCGTGGGGAAGGAAA
GCTCTTTTCCGTCGACCTTTTGGACGATGAAGGTGGAGAAATTCGC
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