mRNA_M-pyrifera_M_contig7835.18420.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig7835.18420.1 vs. uniprot
Match: D7FYT8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYT8_ECTSI) HSP 1 Score: 187 bits (474), Expect = 6.120e-58 Identity = 97/121 (80.17%), Postives = 109/121 (90.08%), Query Frame = 1 Query: 28 DGVRRATPLLLVLVCIELSDVIFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTILSSAVEDLVYLRPTVAVVLAFVGAKLGGEFFGYDVSIGASLGVITGLLGAGVGFSLLERQEKS 390 DGVRRATPLLLVLVC+ELSD++FAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFT+L+SAVEDLVYLRP VAVVL FVG K+GG+FFGYDVS SLG+ITG+L AGV SL+ +K+ Sbjct: 75 DGVRRATPLLLVLVCVELSDIVFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTLLASAVEDLVYLRPAVAVVLGFVGCKIGGDFFGYDVSTELSLGIITGVLAAGVAASLILPGDKT 195
BLAST of mRNA_M-pyrifera_M_contig7835.18420.1 vs. uniprot
Match: A0A6H5LB61_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB61_9PHAE) HSP 1 Score: 182 bits (463), Expect = 2.410e-54 Identity = 96/121 (79.34%), Postives = 107/121 (88.43%), Query Frame = 1 Query: 28 DGVRRATPLLLVLVCIELSDVIFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTILSSAVEDLVYLRPTVAVVLAFVGAKLGGEFFGYDVSIGASLGVITGLLGAGVGFSLLERQEKS 390 DGVRRATPLLLVLVC+ELSD++FAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFT+L+SAVEDLVYLRP VA VL FVG K+GGEFFGY+VS SL +ITG+L AGV SL+ EK+ Sbjct: 230 DGVRRATPLLLVLVCVELSDIVFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTLLASAVEDLVYLRPAVAAVLGFVGCKIGGEFFGYNVSTELSLEIITGVLAAGVAASLILPGEKT 350
BLAST of mRNA_M-pyrifera_M_contig7835.18420.1 vs. uniprot
Match: A0A835YKR2_9STRA (Integral membrane protein TerC family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKR2_9STRA) HSP 1 Score: 163 bits (413), Expect = 9.200e-47 Identity = 87/120 (72.50%), Postives = 102/120 (85.00%), Query Frame = 1 Query: 28 DGVRRATPLLLVLVCIELSDVIFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTILSSAVEDLVYLRPTVAVVLAFVGAKLGGEFFGYDVSIGASLGVITGLLGAGVGFSLLERQEK 387 DGVRRATPLLLVLVC+ELSD++FAVDSIPAVF T+DPF+VYTSNI+AI+NLRSL+T+LS+AV DL YLRP VA VLAFVGAKL E+FGY+V SLGVI+ LLG GV SLL+ E+ Sbjct: 235 DGVRRATPLLLVLVCVELSDLVFAVDSIPAVFGCTRDPFLVYTSNIFAIVNLRSLYTVLSNAVGDLEYLRPAVAGVLAFVGAKLAAEYFGYEVDTLLSLGVISTLLGGGVALSLLKGDEE 354
BLAST of mRNA_M-pyrifera_M_contig7835.18420.1 vs. uniprot
Match: A0A835YPV1_9STRA (Integral membrane protein TerC family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPV1_9STRA) HSP 1 Score: 159 bits (401), Expect = 1.200e-45 Identity = 84/120 (70.00%), Postives = 99/120 (82.50%), Query Frame = 1 Query: 28 DGVRRATPLLLVLVCIELSDVIFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTILSSAVEDLVYLRPTVAVVLAFVGAKLGGEFFGYDVSIGASLGVITGLLGAGVGFSLLERQEK 387 DG+RRATPLLLVLVC+E SD++FAVDSIPAVF VTKDP IVY+SNI+AILNLRSL+T+LS+AV DLVYLRP VA+VLAFVG KLG E+F V SLG+I+ +L GVG SL ER+ Sbjct: 167 DGMRRATPLLLVLVCVEASDLVFAVDSIPAVFGVTKDPLIVYSSNIFAILNLRSLYTVLSTAVGDLVYLRPAVALVLAFVGLKLGAEYFSVTVDTVLSLGIISTILAGGVGLSLYERRNS 286
BLAST of mRNA_M-pyrifera_M_contig7835.18420.1 vs. uniprot
Match: A0A7S2V8N4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V8N4_9STRA) HSP 1 Score: 159 bits (403), Expect = 3.740e-45 Identity = 79/121 (65.29%), Postives = 101/121 (83.47%), Query Frame = 1 Query: 28 DGVRRATPLLLVLVCIELSDVIFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTILSSAVEDLVYLRPTVAVVLAFVGAKLGGEFFGYDVSIGASLGVITGLLGAGVGFSLLERQEKS 390 DGV+ ATPLLL LVC+ELSD++FAVDS+PAVF VTKDPFIVYTSNI+AIL LRSL+T+LS AV +L YL+P V +VL F+G+KLG E++GY++S G SLGV+ LLG GVG S+L + ++ Sbjct: 254 DGVKVATPLLLCLVCVELSDIVFAVDSVPAVFGVTKDPFIVYTSNIFAILGLRSLYTVLSKAVSELDYLQPAVGIVLGFIGSKLGLEYYGYEISTGVSLGVVAALLGGGVGLSVLTKSFRA 374
BLAST of mRNA_M-pyrifera_M_contig7835.18420.1 vs. uniprot
Match: A0A7S2FP03_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FP03_9STRA) HSP 1 Score: 153 bits (387), Expect = 3.350e-44 Identity = 78/122 (63.93%), Postives = 102/122 (83.61%), Query Frame = 1 Query: 25 ADGVRRATPLLLVLVCIELSDVIFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTILSSAVEDLVYLRPTVAVVLAFVGAKLGGEFFGYDVSIGASLGVITGLLGAGVGFSLLERQEKS 390 +DGVR+ATPLLL L+C+ELSD++FAVDS+PAVF VTKDPFIV+TSN++AI++LRSL+TI+S+AV DL YL+P V +VLAFVGAKLG +F Y++S SLGVI+ LL G+ SL ER+ + Sbjct: 119 SDGVRKATPLLLALICLELSDLVFAVDSVPAVFGVTKDPFIVFTSNLFAIVSLRSLYTIISNAVNDLKYLQPAVGLVLAFVGAKLGAGYFDYEISNLISLGVISTLLSGGIALSLYEREADA 240
BLAST of mRNA_M-pyrifera_M_contig7835.18420.1 vs. uniprot
Match: A0A7S3Z2F4_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z2F4_9EUKA) HSP 1 Score: 147 bits (372), Expect = 2.110e-41 Identity = 77/119 (64.71%), Postives = 94/119 (78.99%), Query Frame = 1 Query: 28 DGVRRATPLLLVLVCIELSDVIFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTILSSAVEDLVYLRPTVAVVLAFVGAKLGGEFFGYDVSIGASLGVITGLLGAGVGFSLLERQE 384 DG + ATPL L LVCIE+SDV+FAVDS+PAVF VTKDP IV+TSN++AIL LRSL+T+LS+AV+DL YL+P VA++L FVGAKL E+FG DV SL VI LLG G+G SL E+ Sbjct: 165 DGRKVATPLFLALVCIEISDVLFAVDSVPAVFGVTKDPLIVFTSNMFAILGLRSLYTVLSTAVQDLKYLQPAVALILGFVGAKLVAEYFGMDVGTAESLAVILSLLGGGIGLSLYEKNN 283
BLAST of mRNA_M-pyrifera_M_contig7835.18420.1 vs. uniprot
Match: W7U074_9STRA (Integral membrane protein TerC n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U074_9STRA) HSP 1 Score: 150 bits (379), Expect = 2.380e-41 Identity = 78/117 (66.67%), Postives = 98/117 (83.76%), Query Frame = 1 Query: 37 RRATPLLLVLVCIELSDVIFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTILSSAVEDLVYLRPTVAVVLAFVGAKLGGEFFGYDVSIGASLGVITGLLGAGVGFSLLERQEK 387 R ATPLLLVL+C+ELSDV+FAVDS+PAVF VTKDPFIVYTSNI+AIL LRSL+T+L++A+ DL YL+P VA++L VG KLG E+FG++VS SLGVIT LLG+GV SL + ++ Sbjct: 282 RVATPLLLVLICVELSDVVFAVDSVPAVFGVTKDPFIVYTSNIFAILGLRSLYTVLANAMVDLPYLKPAVALILGLVGLKLGAEYFGFEVSNAVSLGVITSLLGSGVWASLYLKPDR 398
BLAST of mRNA_M-pyrifera_M_contig7835.18420.1 vs. uniprot
Match: A0A7S1E5C0_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1E5C0_HEMAN) HSP 1 Score: 139 bits (350), Expect = 1.620e-39 Identity = 71/120 (59.17%), Postives = 96/120 (80.00%), Query Frame = 1 Query: 28 DGVRRATPLLLVLVCIELSDVIFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTILSSAVEDLVYLRPTVAVVLAFVGAKLGGEFFGYDVSIGASLGVITGLLGAGVGFSLLERQEK 387 DGV+RATPLLLV+VCIELSD++FAVDSIPA+F VT+DPFI++TSNI+AIL LR+LF +++ +E L YL VA+VL FVG K+ EF G ++S A+LGV+ +LGAGV SL++ ++ Sbjct: 43 DGVKRATPLLLVVVCIELSDILFAVDSIPAIFGVTEDPFIIFTSNIFAILGLRALFQVVAKLMESLEYLEKAVAIVLGFVGVKMMAEFGGIEISEEAALGVVVSVLGAGVAASLVKNGQE 162
BLAST of mRNA_M-pyrifera_M_contig7835.18420.1 vs. uniprot
Match: A0A7S0W8F8_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W8F8_9CRYP) HSP 1 Score: 141 bits (356), Expect = 1.910e-39 Identity = 72/122 (59.02%), Postives = 97/122 (79.51%), Query Frame = 1 Query: 28 DGVRRATPLLLVLVCIELSDVIFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTILSSAVEDLVYLRPTVAVVLAFVGAKLGGEFFGYDVSIGASLGVITGLLGAGVGFSLLERQEKSA 393 DGVRRATPLLLV+VC+ELSDV+FAVDSIPA+F VT+DPFI++TSNI+AIL LR+LF +++ +E+L YL VA+VL FVG K+ EF G ++S A+L V+ +LGAGV SL++ ++ A Sbjct: 127 DGVRRATPLLLVVVCVELSDVLFAVDSIPAIFGVTEDPFIIFTSNIFAILGLRALFQVVAKLMENLAYLEQAVAIVLGFVGVKMMAEFGGVEISEEAALAVVVSVLGAGVAASLVKNSQEGA 248 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7835.18420.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig7835.18420.1 >prot_M-pyrifera_M_contig7835.18420.1 ID=prot_M-pyrifera_M_contig7835.18420.1|Name=mRNA_M-pyrifera_M_contig7835.18420.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=132bp MVSHCLEQADGVRRATPLLLVLVCIELSDVIFAVDSIPAVFAVTKDPFIVback to top mRNA from alignment at M-pyrifera_M_contig7835:8418..9316- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig7835.18420.1 ID=mRNA_M-pyrifera_M_contig7835.18420.1|Name=mRNA_M-pyrifera_M_contig7835.18420.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=899bp|location=Sequence derived from alignment at M-pyrifera_M_contig7835:8418..9316- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig7835:8418..9316- >mRNA_M-pyrifera_M_contig7835.18420.1 ID=mRNA_M-pyrifera_M_contig7835.18420.1|Name=mRNA_M-pyrifera_M_contig7835.18420.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=792bp|location=Sequence derived from alignment at M-pyrifera_M_contig7835:8418..9316- (Macrocystis pyrifera P11B4 male)back to top |