prot_M-pyrifera_M_contig7835.18420.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig7835.18420.1
Unique Name	prot_M-pyrifera_M_contig7835.18420.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	132

Homology

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BLAST of mRNA_M-pyrifera_M_contig7835.18420.1 vs. uniprot
Match: D7FYT8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYT8_ECTSI)

HSP 1 Score: 187 bits (474), Expect = 6.120e-58
Identity = 97/121 (80.17%), Postives = 109/121 (90.08%), Query Frame = 0

Query:   10 DGVRRATPLLLVLVCIELSDVIFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTILSSAVEDLVYLRPTVAVVLAFVGAKLGGEFFGYDVSIGASLGVITGLLGAGVGFSLLERQEKS 130
            DGVRRATPLLLVLVC+ELSD++FAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFT+L+SAVEDLVYLRP VAVVL FVG K+GG+FFGYDVS   SLG+ITG+L AGV  SL+   +K+
Sbjct:   75 DGVRRATPLLLVLVCVELSDIVFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTLLASAVEDLVYLRPAVAVVLGFVGCKIGGDFFGYDVSTELSLGIITGVLAAGVAASLILPGDKT 195

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BLAST of mRNA_M-pyrifera_M_contig7835.18420.1 vs. uniprot
Match: A0A6H5LB61_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB61_9PHAE)

HSP 1 Score: 182 bits (463), Expect = 2.410e-54
Identity = 96/121 (79.34%), Postives = 107/121 (88.43%), Query Frame = 0

Query:   10 DGVRRATPLLLVLVCIELSDVIFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTILSSAVEDLVYLRPTVAVVLAFVGAKLGGEFFGYDVSIGASLGVITGLLGAGVGFSLLERQEKS 130
            DGVRRATPLLLVLVC+ELSD++FAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFT+L+SAVEDLVYLRP VA VL FVG K+GGEFFGY+VS   SL +ITG+L AGV  SL+   EK+
Sbjct:  230 DGVRRATPLLLVLVCVELSDIVFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTLLASAVEDLVYLRPAVAAVLGFVGCKIGGEFFGYNVSTELSLEIITGVLAAGVAASLILPGEKT 350

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BLAST of mRNA_M-pyrifera_M_contig7835.18420.1 vs. uniprot
Match: A0A835YKR2_9STRA (Integral membrane protein TerC family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKR2_9STRA)

HSP 1 Score: 163 bits (413), Expect = 9.200e-47
Identity = 87/120 (72.50%), Postives = 102/120 (85.00%), Query Frame = 0

Query:   10 DGVRRATPLLLVLVCIELSDVIFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTILSSAVEDLVYLRPTVAVVLAFVGAKLGGEFFGYDVSIGASLGVITGLLGAGVGFSLLERQEK 129
            DGVRRATPLLLVLVC+ELSD++FAVDSIPAVF  T+DPF+VYTSNI+AI+NLRSL+T+LS+AV DL YLRP VA VLAFVGAKL  E+FGY+V    SLGVI+ LLG GV  SLL+  E+
Sbjct:  235 DGVRRATPLLLVLVCVELSDLVFAVDSIPAVFGCTRDPFLVYTSNIFAIVNLRSLYTVLSNAVGDLEYLRPAVAGVLAFVGAKLAAEYFGYEVDTLLSLGVISTLLGGGVALSLLKGDEE 354

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BLAST of mRNA_M-pyrifera_M_contig7835.18420.1 vs. uniprot
Match: A0A835YPV1_9STRA (Integral membrane protein TerC family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPV1_9STRA)

HSP 1 Score: 159 bits (401), Expect = 1.200e-45
Identity = 84/120 (70.00%), Postives = 99/120 (82.50%), Query Frame = 0

Query:   10 DGVRRATPLLLVLVCIELSDVIFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTILSSAVEDLVYLRPTVAVVLAFVGAKLGGEFFGYDVSIGASLGVITGLLGAGVGFSLLERQEK 129
            DG+RRATPLLLVLVC+E SD++FAVDSIPAVF VTKDP IVY+SNI+AILNLRSL+T+LS+AV DLVYLRP VA+VLAFVG KLG E+F   V    SLG+I+ +L  GVG SL ER+  
Sbjct:  167 DGMRRATPLLLVLVCVEASDLVFAVDSIPAVFGVTKDPLIVYSSNIFAILNLRSLYTVLSTAVGDLVYLRPAVALVLAFVGLKLGAEYFSVTVDTVLSLGIISTILAGGVGLSLYERRNS 286

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BLAST of mRNA_M-pyrifera_M_contig7835.18420.1 vs. uniprot
Match: A0A7S2V8N4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V8N4_9STRA)

HSP 1 Score: 159 bits (403), Expect = 3.740e-45
Identity = 79/121 (65.29%), Postives = 101/121 (83.47%), Query Frame = 0

Query:   10 DGVRRATPLLLVLVCIELSDVIFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTILSSAVEDLVYLRPTVAVVLAFVGAKLGGEFFGYDVSIGASLGVITGLLGAGVGFSLLERQEKS 130
            DGV+ ATPLLL LVC+ELSD++FAVDS+PAVF VTKDPFIVYTSNI+AIL LRSL+T+LS AV +L YL+P V +VL F+G+KLG E++GY++S G SLGV+  LLG GVG S+L +  ++
Sbjct:  254 DGVKVATPLLLCLVCVELSDIVFAVDSVPAVFGVTKDPFIVYTSNIFAILGLRSLYTVLSKAVSELDYLQPAVGIVLGFIGSKLGLEYYGYEISTGVSLGVVAALLGGGVGLSVLTKSFRA 374

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BLAST of mRNA_M-pyrifera_M_contig7835.18420.1 vs. uniprot
Match: A0A7S2FP03_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FP03_9STRA)

HSP 1 Score: 153 bits (387), Expect = 3.350e-44
Identity = 78/122 (63.93%), Postives = 102/122 (83.61%), Query Frame = 0

Query:    9 ADGVRRATPLLLVLVCIELSDVIFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTILSSAVEDLVYLRPTVAVVLAFVGAKLGGEFFGYDVSIGASLGVITGLLGAGVGFSLLERQEKS 130
            +DGVR+ATPLLL L+C+ELSD++FAVDS+PAVF VTKDPFIV+TSN++AI++LRSL+TI+S+AV DL YL+P V +VLAFVGAKLG  +F Y++S   SLGVI+ LL  G+  SL ER+  +
Sbjct:  119 SDGVRKATPLLLALICLELSDLVFAVDSVPAVFGVTKDPFIVFTSNLFAIVSLRSLYTIISNAVNDLKYLQPAVGLVLAFVGAKLGAGYFDYEISNLISLGVISTLLSGGIALSLYEREADA 240

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BLAST of mRNA_M-pyrifera_M_contig7835.18420.1 vs. uniprot
Match: A0A7S3Z2F4_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z2F4_9EUKA)

HSP 1 Score: 147 bits (372), Expect = 2.110e-41
Identity = 77/119 (64.71%), Postives = 94/119 (78.99%), Query Frame = 0

Query:   10 DGVRRATPLLLVLVCIELSDVIFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTILSSAVEDLVYLRPTVAVVLAFVGAKLGGEFFGYDVSIGASLGVITGLLGAGVGFSLLERQE 128
            DG + ATPL L LVCIE+SDV+FAVDS+PAVF VTKDP IV+TSN++AIL LRSL+T+LS+AV+DL YL+P VA++L FVGAKL  E+FG DV    SL VI  LLG G+G SL E+  
Sbjct:  165 DGRKVATPLFLALVCIEISDVLFAVDSVPAVFGVTKDPLIVFTSNMFAILGLRSLYTVLSTAVQDLKYLQPAVALILGFVGAKLVAEYFGMDVGTAESLAVILSLLGGGIGLSLYEKNN 283

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BLAST of mRNA_M-pyrifera_M_contig7835.18420.1 vs. uniprot
Match: W7U074_9STRA (Integral membrane protein TerC n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U074_9STRA)

HSP 1 Score: 150 bits (379), Expect = 2.380e-41
Identity = 78/117 (66.67%), Postives = 98/117 (83.76%), Query Frame = 0

Query:   13 RRATPLLLVLVCIELSDVIFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTILSSAVEDLVYLRPTVAVVLAFVGAKLGGEFFGYDVSIGASLGVITGLLGAGVGFSLLERQEK 129
            R ATPLLLVL+C+ELSDV+FAVDS+PAVF VTKDPFIVYTSNI+AIL LRSL+T+L++A+ DL YL+P VA++L  VG KLG E+FG++VS   SLGVIT LLG+GV  SL  + ++
Sbjct:  282 RVATPLLLVLICVELSDVVFAVDSVPAVFGVTKDPFIVYTSNIFAILGLRSLYTVLANAMVDLPYLKPAVALILGLVGLKLGAEYFGFEVSNAVSLGVITSLLGSGVWASLYLKPDR 398

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BLAST of mRNA_M-pyrifera_M_contig7835.18420.1 vs. uniprot
Match: A0A7S1E5C0_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1E5C0_HEMAN)

HSP 1 Score: 139 bits (350), Expect = 1.620e-39
Identity = 71/120 (59.17%), Postives = 96/120 (80.00%), Query Frame = 0

Query:   10 DGVRRATPLLLVLVCIELSDVIFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTILSSAVEDLVYLRPTVAVVLAFVGAKLGGEFFGYDVSIGASLGVITGLLGAGVGFSLLERQEK 129
            DGV+RATPLLLV+VCIELSD++FAVDSIPA+F VT+DPFI++TSNI+AIL LR+LF +++  +E L YL   VA+VL FVG K+  EF G ++S  A+LGV+  +LGAGV  SL++  ++
Sbjct:   43 DGVKRATPLLLVVVCIELSDILFAVDSIPAIFGVTEDPFIIFTSNIFAILGLRALFQVVAKLMESLEYLEKAVAIVLGFVGVKMMAEFGGIEISEEAALGVVVSVLGAGVAASLVKNGQE 162

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BLAST of mRNA_M-pyrifera_M_contig7835.18420.1 vs. uniprot
Match: A0A7S0W8F8_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W8F8_9CRYP)

HSP 1 Score: 141 bits (356), Expect = 1.910e-39
Identity = 72/122 (59.02%), Postives = 97/122 (79.51%), Query Frame = 0

Query:   10 DGVRRATPLLLVLVCIELSDVIFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTILSSAVEDLVYLRPTVAVVLAFVGAKLGGEFFGYDVSIGASLGVITGLLGAGVGFSLLERQEKSA 131
            DGVRRATPLLLV+VC+ELSDV+FAVDSIPA+F VT+DPFI++TSNI+AIL LR+LF +++  +E+L YL   VA+VL FVG K+  EF G ++S  A+L V+  +LGAGV  SL++  ++ A
Sbjct:  127 DGVRRATPLLLVVVCVELSDVLFAVDSIPAIFGVTEDPFIIFTSNIFAILGLRALFQVVAKLMENLAYLEQAVAIVLGFVGVKMMAEFGGVEISEEAALAVVVSVLGAGVAASLVKNSQEGA 248

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig7835.18420.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig7835.18420.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FYT8_ECTSI	6.120e-58	80.17	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5LB61_9PHAE	2.410e-54	79.34	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A835YKR2_9STRA	9.200e-47	72.50	Integral membrane protein TerC family-domain-conta...	[more]
A0A835YPV1_9STRA	1.200e-45	70.00	Integral membrane protein TerC family-domain-conta...	[more]
A0A7S2V8N4_9STRA	3.740e-45	65.29	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A7S2FP03_9STRA	3.350e-44	63.93	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
A0A7S3Z2F4_9EUKA	2.110e-41	64.71	Hypothetical protein n=1 Tax=Lotharella globosa Ta...	[more]
W7U074_9STRA	2.380e-41	66.67	Integral membrane protein TerC n=3 Tax=Monodopsida...	[more]
A0A7S1E5C0_HEMAN	1.620e-39	59.17	Hypothetical protein n=1 Tax=Hemiselmis andersenii...	[more]
A0A7S0W8F8_9CRYP	1.910e-39	59.02	Hypothetical protein n=1 Tax=Hemiselmis tepida Tax...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005496	Integral membrane protein TerC	PFAM	PF03741	TerC	coord: 15..93 e-value: 1.2E-22 score: 80.5
None	No IPR available	PANTHER	PTHR30238	MEMBRANE BOUND PREDICTED REDOX MODULATOR	coord: 8..129
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 66..76
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 77..98
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 48..65
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 104..124
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 43..47
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 18..42
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 125..131
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 99..103
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..17
None	No IPR available	TMHMM	TMhelix		coord: 102..124
None	No IPR available	TMHMM	TMhelix		coord: 47..69
None	No IPR available	TMHMM	TMhelix		coord: 20..42
None	No IPR available	TMHMM	TMhelix		coord: 76..98
IPR022369	Integral membrane protein TerC, riboswitch-linked	PANTHER	PTHR30238:SF0	THYLAKOID MEMBRANE PROTEIN TERC, CHLOROPLASTIC	coord: 8..129

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig7835	contig	M-pyrifera_M_contig7835:8418..9316 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig7835.18420.1	mRNA_M-pyrifera_M_contig7835.18420.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig7835 8418..9316 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig7835.18420.1 ID=prot_M-pyrifera_M_contig7835.18420.1|Name=mRNA_M-pyrifera_M_contig7835.18420.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=132bp
MVSHCLEQADGVRRATPLLLVLVCIELSDVIFAVDSIPAVFAVTKDPFIV
YTSNIWAILNLRSLFTILSSAVEDLVYLRPTVAVVLAFVGAKLGGEFFGY
DVSIGASLGVITGLLGAGVGFSLLERQEKSA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005496	Integral_membrane_TerC
IPR022369	Integral_membrane_TerC_rswitch