mRNA_M-pyrifera_M_contig7741.18223.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig7741.18223.1 vs. uniprot
Match: D7FQB6_ECTSI (Ribosomal_S17_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQB6_ECTSI) HSP 1 Score: 185 bits (469), Expect = 6.350e-54 Identity = 86/89 (96.63%), Postives = 89/89 (100.00%), Query Frame = 3 Query: 3 GLVISAGKMTNTIVIRRDYLHYISKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHDPCINTAVSVRKQFRMF 269 GLVISAGKMTNTIVIRRDYLH++SKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEH+PCINTAVSVRKQFRMF Sbjct: 103 GLVISAGKMTNTIVIRRDYLHFVSKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHEPCINTAVSVRKQFRMF 191
BLAST of mRNA_M-pyrifera_M_contig7741.18223.1 vs. uniprot
Match: A0A835Z9X9_9STRA (Ribosomal protein S17-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9X9_9STRA) HSP 1 Score: 159 bits (403), Expect = 1.970e-44 Identity = 70/89 (78.65%), Postives = 83/89 (93.26%), Query Frame = 3 Query: 3 GLVISAGKMTNTIVIRRDYLHYISKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHDPCINTAVSVRKQFRMF 269 GLV+SAGKM NT VIRRDYLHY++KYRRFEKRHKN+ VH +PC+ NVKEGDI+T+GQCRPLSKT+RFN LEH+PCINT++SV+KQFRMF Sbjct: 76 GLVLSAGKMKNTCVIRRDYLHYVTKYRRFEKRHKNLMVHLSPCFPNVKEGDILTVGQCRPLSKTIRFNALEHEPCINTSISVKKQFRMF 164
BLAST of mRNA_M-pyrifera_M_contig7741.18223.1 vs. uniprot
Match: A0A7S2XWS0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWS0_9STRA) HSP 1 Score: 147 bits (371), Expect = 1.150e-39 Identity = 69/89 (77.53%), Postives = 79/89 (88.76%), Query Frame = 3 Query: 3 GLVISAGKMTNTIVIRRDYLHYISKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHDPCINTAVSVRKQFRMF 269 GLVIS KM NTI++RRDYLHYISKYRRFEKRHKNM VH +PC+ +KEGD+VTIGQCRPLSKTVRFNVLEH P +N A++V+KQFRMF Sbjct: 78 GLVIST-KMKNTIIVRRDYLHYISKYRRFEKRHKNMAVHASPCFDTIKEGDVVTIGQCRPLSKTVRFNVLEHLPSVNQALNVKKQFRMF 165
BLAST of mRNA_M-pyrifera_M_contig7741.18223.1 vs. uniprot
Match: A0A7S4WCA2_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4WCA2_9DINO) HSP 1 Score: 141 bits (355), Expect = 2.690e-37 Identity = 65/89 (73.03%), Postives = 77/89 (86.52%), Query Frame = 3 Query: 3 GLVISAGKMTNTIVIRRDYLHYISKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHDPCINTAVSVRKQFRMF 269 GLVIS KMT TI++RRDYLHYI KYRR+EKRHKN+ VHC+P + V EGD+VTIGQCRPLSKTVRFNV+EH P +N A++V+KQFRMF Sbjct: 78 GLVIST-KMTRTIIVRRDYLHYIRKYRRYEKRHKNVAVHCSPAFDTVSEGDVVTIGQCRPLSKTVRFNVIEHLPTVNKAINVKKQFRMF 165
BLAST of mRNA_M-pyrifera_M_contig7741.18223.1 vs. uniprot
Match: A0A7R9U3I9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3I9_9STRA) HSP 1 Score: 141 bits (356), Expect = 3.570e-37 Identity = 62/89 (69.66%), Postives = 79/89 (88.76%), Query Frame = 3 Query: 3 GLVISAGKMTNTIVIRRDYLHYISKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHDPCINTAVSVRKQFRMF 269 G+VIS KMT T+V+RRDYLH++ KY+R+EKRHKNMTVHC+P + NVK GD+VT+GQCRPLSKT+RFNVL H+P +N +VSV+KQFR+F Sbjct: 99 GIVIS-NKMTRTVVVRRDYLHFVRKYKRYEKRHKNMTVHCSPAFTNVKPGDVVTVGQCRPLSKTIRFNVLVHEPAVNQSVSVKKQFRVF 186
BLAST of mRNA_M-pyrifera_M_contig7741.18223.1 vs. uniprot
Match: F0XZW5_AURAN (Ribosomal_S17_N domain-containing protein n=3 Tax=Pelagomonadales TaxID=54409 RepID=F0XZW5_AURAN) HSP 1 Score: 137 bits (345), Expect = 8.570e-36 Identity = 62/89 (69.66%), Postives = 79/89 (88.76%), Query Frame = 3 Query: 3 GLVISAGKMTNTIVIRRDYLHYISKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHDPCINTAVSVRKQFRMF 269 G+VIS KM T+VIRRDYL++ KYRRFEKRHKNM+VHC+PC++NVKEGDIVT+GQCRPL+KTVRFNVL H+P +N +++V+K FR+F Sbjct: 80 GMVIST-KMKRTLVIRRDYLNWCGKYRRFEKRHKNMSVHCSPCFENVKEGDIVTVGQCRPLTKTVRFNVLTHEPAVNQSLNVKKVFRVF 167
BLAST of mRNA_M-pyrifera_M_contig7741.18223.1 vs. uniprot
Match: A0A4D9CZU0_9STRA (Ribosomal_S17_N domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CZU0_9STRA) HSP 1 Score: 137 bits (345), Expect = 1.120e-35 Identity = 61/89 (68.54%), Postives = 77/89 (86.52%), Query Frame = 3 Query: 3 GLVISAGKMTNTIVIRRDYLHYISKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHDPCINTAVSVRKQFRMF 269 G+V+S KM T++IRRDYLH++SKY RFEKRHKN+ HC+P + VKEGDIVT+GQCRPLSKTVRFNVL+H+P IN A+S++KQFR+F Sbjct: 89 GIVLST-KMNRTVIIRRDYLHWVSKYSRFEKRHKNLAAHCSPAFPQVKEGDIVTVGQCRPLSKTVRFNVLQHEPSINQALSIKKQFRVF 176
BLAST of mRNA_M-pyrifera_M_contig7741.18223.1 vs. uniprot
Match: A0A812UUF3_SYMMI (RPS11 protein n=2 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UUF3_SYMMI) HSP 1 Score: 135 bits (340), Expect = 1.500e-35 Identity = 60/89 (67.42%), Postives = 77/89 (86.52%), Query Frame = 3 Query: 3 GLVISAGKMTNTIVIRRDYLHYISKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHDPCINTAVSVRKQFRMF 269 G+V+S KM T+VIRRDYL Y+ KYRRFEKRH NM+VHC+PC+QNV EGD+VT+GQCRPL+KTV+FNVLEH P +N +++V+K FR+F Sbjct: 42 GIVVST-KMKRTVVIRRDYLQYVRKYRRFEKRHANMSVHCSPCFQNVCEGDVVTVGQCRPLAKTVKFNVLEHQPAVNKSLNVKKIFRVF 129
BLAST of mRNA_M-pyrifera_M_contig7741.18223.1 vs. uniprot
Match: A0A7S1XVW4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XVW4_9STRA) HSP 1 Score: 135 bits (341), Expect = 3.240e-35 Identity = 60/89 (67.42%), Postives = 77/89 (86.52%), Query Frame = 3 Query: 3 GLVISAGKMTNTIVIRRDYLHYISKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHDPCINTAVSVRKQFRMF 269 G+VIS KM TIV+RRDYLH++ KY+R+EKRHKN+T HC+PC+ NVK GD+VTIGQCRPL+KT+RFNVL H+P N +V+V+KQFR+F Sbjct: 79 GVVIS-NKMKRTIVVRRDYLHFVRKYKRYEKRHKNVTAHCSPCFVNVKPGDVVTIGQCRPLAKTIRFNVLTHEPSTNQSVNVKKQFRVF 166
BLAST of mRNA_M-pyrifera_M_contig7741.18223.1 vs. uniprot
Match: A0A7S1UA06_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UA06_9STRA) HSP 1 Score: 135 bits (341), Expect = 5.380e-34 Identity = 60/89 (67.42%), Postives = 77/89 (86.52%), Query Frame = 3 Query: 3 GLVISAGKMTNTIVIRRDYLHYISKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHDPCINTAVSVRKQFRMF 269 G+VIS KM TIV+RRDYLH++ KY+R+EKRHKN+T HC+PC+ NVK GD+VTIGQCRPL+KT+RFNVL H+P N +V+V+KQFR+F Sbjct: 182 GVVIS-NKMKRTIVVRRDYLHFVRKYKRYEKRHKNVTAHCSPCFVNVKPGDVVTIGQCRPLAKTIRFNVLTHEPSTNQSVNVKKQFRVF 269 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7741.18223.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig7741.18223.1 >prot_M-pyrifera_M_contig7741.18223.1 ID=prot_M-pyrifera_M_contig7741.18223.1|Name=mRNA_M-pyrifera_M_contig7741.18223.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=82bp MTNTIVIRRDYLHYISKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCback to top mRNA from alignment at M-pyrifera_M_contig7741:737..3342+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig7741.18223.1 ID=mRNA_M-pyrifera_M_contig7741.18223.1|Name=mRNA_M-pyrifera_M_contig7741.18223.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2606bp|location=Sequence derived from alignment at M-pyrifera_M_contig7741:737..3342+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig7741:737..3342+ >mRNA_M-pyrifera_M_contig7741.18223.1 ID=mRNA_M-pyrifera_M_contig7741.18223.1|Name=mRNA_M-pyrifera_M_contig7741.18223.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=492bp|location=Sequence derived from alignment at M-pyrifera_M_contig7741:737..3342+ (Macrocystis pyrifera P11B4 male)back to top |