prot_M-pyrifera_M_contig7741.18223.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig7741.18223.1
Unique Nameprot_M-pyrifera_M_contig7741.18223.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length82
Homology
BLAST of mRNA_M-pyrifera_M_contig7741.18223.1 vs. uniprot
Match: D7FQB6_ECTSI (Ribosomal_S17_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQB6_ECTSI)

HSP 1 Score: 170 bits (430), Expect = 3.100e-52
Identity = 78/81 (96.30%), Postives = 81/81 (100.00%), Query Frame = 0
Query:    1 MTNTIVIRRDYLHYISKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHDPCINTAVSVRKQFRMF 81
            MTNTIVIRRDYLH++SKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEH+PCINTAVSVRKQFRMF
Sbjct:  111 MTNTIVIRRDYLHFVSKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHEPCINTAVSVRKQFRMF 191          
BLAST of mRNA_M-pyrifera_M_contig7741.18223.1 vs. uniprot
Match: A0A835Z9X9_9STRA (Ribosomal protein S17-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9X9_9STRA)

HSP 1 Score: 145 bits (366), Expect = 7.310e-43
Identity = 63/81 (77.78%), Postives = 75/81 (92.59%), Query Frame = 0
Query:    1 MTNTIVIRRDYLHYISKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHDPCINTAVSVRKQFRMF 81
            M NT VIRRDYLHY++KYRRFEKRHKN+ VH +PC+ NVKEGDI+T+GQCRPLSKT+RFN LEH+PCINT++SV+KQFRMF
Sbjct:   84 MKNTCVIRRDYLHYVTKYRRFEKRHKNLMVHLSPCFPNVKEGDILTVGQCRPLSKTIRFNALEHEPCINTSISVKKQFRMF 164          
BLAST of mRNA_M-pyrifera_M_contig7741.18223.1 vs. uniprot
Match: A0A7S2XWS0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWS0_9STRA)

HSP 1 Score: 141 bits (355), Expect = 3.540e-41
Identity = 63/81 (77.78%), Postives = 73/81 (90.12%), Query Frame = 0
Query:    1 MTNTIVIRRDYLHYISKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHDPCINTAVSVRKQFRMF 81
            M NTI++RRDYLHYISKYRRFEKRHKNM VH +PC+  +KEGD+VTIGQCRPLSKTVRFNVLEH P +N A++V+KQFRMF
Sbjct:   85 MKNTIIVRRDYLHYISKYRRFEKRHKNMAVHASPCFDTIKEGDVVTIGQCRPLSKTVRFNVLEHLPSVNQALNVKKQFRMF 165          
BLAST of mRNA_M-pyrifera_M_contig7741.18223.1 vs. uniprot
Match: A0A7R9U3I9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3I9_9STRA)

HSP 1 Score: 135 bits (341), Expect = 8.740e-39
Identity = 57/81 (70.37%), Postives = 73/81 (90.12%), Query Frame = 0
Query:    1 MTNTIVIRRDYLHYISKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHDPCINTAVSVRKQFRMF 81
            MT T+V+RRDYLH++ KY+R+EKRHKNMTVHC+P + NVK GD+VT+GQCRPLSKT+RFNVL H+P +N +VSV+KQFR+F
Sbjct:  106 MTRTVVVRRDYLHFVRKYKRYEKRHKNMTVHCSPAFTNVKPGDVVTVGQCRPLSKTIRFNVLVHEPAVNQSVSVKKQFRVF 186          
BLAST of mRNA_M-pyrifera_M_contig7741.18223.1 vs. uniprot
Match: A0A7S4WCA2_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4WCA2_9DINO)

HSP 1 Score: 135 bits (339), Expect = 9.540e-39
Identity = 59/81 (72.84%), Postives = 71/81 (87.65%), Query Frame = 0
Query:    1 MTNTIVIRRDYLHYISKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHDPCINTAVSVRKQFRMF 81
            MT TI++RRDYLHYI KYRR+EKRHKN+ VHC+P +  V EGD+VTIGQCRPLSKTVRFNV+EH P +N A++V+KQFRMF
Sbjct:   85 MTRTIIVRRDYLHYIRKYRRYEKRHKNVAVHCSPAFDTVSEGDVVTIGQCRPLSKTVRFNVIEHLPTVNKAINVKKQFRMF 165          
BLAST of mRNA_M-pyrifera_M_contig7741.18223.1 vs. uniprot
Match: A0A4D9CZU0_9STRA (Ribosomal_S17_N domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CZU0_9STRA)

HSP 1 Score: 132 bits (333), Expect = 1.070e-37
Identity = 57/81 (70.37%), Postives = 71/81 (87.65%), Query Frame = 0
Query:    1 MTNTIVIRRDYLHYISKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHDPCINTAVSVRKQFRMF 81
            M  T++IRRDYLH++SKY RFEKRHKN+  HC+P +  VKEGDIVT+GQCRPLSKTVRFNVL+H+P IN A+S++KQFR+F
Sbjct:   96 MNRTVIIRRDYLHWVSKYSRFEKRHKNLAAHCSPAFPQVKEGDIVTVGQCRPLSKTVRFNVLQHEPSINQALSIKKQFRVF 176          
BLAST of mRNA_M-pyrifera_M_contig7741.18223.1 vs. uniprot
Match: F0XZW5_AURAN (Ribosomal_S17_N domain-containing protein n=3 Tax=Pelagomonadales TaxID=54409 RepID=F0XZW5_AURAN)

HSP 1 Score: 132 bits (331), Expect = 1.660e-37
Identity = 57/81 (70.37%), Postives = 73/81 (90.12%), Query Frame = 0
Query:    1 MTNTIVIRRDYLHYISKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHDPCINTAVSVRKQFRMF 81
            M  T+VIRRDYL++  KYRRFEKRHKNM+VHC+PC++NVKEGDIVT+GQCRPL+KTVRFNVL H+P +N +++V+K FR+F
Sbjct:   87 MKRTLVIRRDYLNWCGKYRRFEKRHKNMSVHCSPCFENVKEGDIVTVGQCRPLTKTVRFNVLTHEPAVNQSLNVKKVFRVF 167          
BLAST of mRNA_M-pyrifera_M_contig7741.18223.1 vs. uniprot
Match: A0A812UUF3_SYMMI (RPS11 protein n=2 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UUF3_SYMMI)

HSP 1 Score: 130 bits (327), Expect = 2.180e-37
Identity = 56/81 (69.14%), Postives = 71/81 (87.65%), Query Frame = 0
Query:    1 MTNTIVIRRDYLHYISKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHDPCINTAVSVRKQFRMF 81
            M  T+VIRRDYL Y+ KYRRFEKRH NM+VHC+PC+QNV EGD+VT+GQCRPL+KTV+FNVLEH P +N +++V+K FR+F
Sbjct:   49 MKRTVVIRRDYLQYVRKYRRFEKRHANMSVHCSPCFQNVCEGDVVTVGQCRPLAKTVKFNVLEHQPAVNKSLNVKKIFRVF 129          
BLAST of mRNA_M-pyrifera_M_contig7741.18223.1 vs. uniprot
Match: A0A7S1XVW4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XVW4_9STRA)

HSP 1 Score: 130 bits (327), Expect = 6.520e-37
Identity = 55/81 (67.90%), Postives = 71/81 (87.65%), Query Frame = 0
Query:    1 MTNTIVIRRDYLHYISKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHDPCINTAVSVRKQFRMF 81
            M  TIV+RRDYLH++ KY+R+EKRHKN+T HC+PC+ NVK GD+VTIGQCRPL+KT+RFNVL H+P  N +V+V+KQFR+F
Sbjct:   86 MKRTIVVRRDYLHFVRKYKRYEKRHKNVTAHCSPCFVNVKPGDVVTIGQCRPLAKTIRFNVLTHEPSTNQSVNVKKQFRVF 166          
BLAST of mRNA_M-pyrifera_M_contig7741.18223.1 vs. uniprot
Match: A0A7S1UA06_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UA06_9STRA)

HSP 1 Score: 130 bits (327), Expect = 1.020e-35
Identity = 55/81 (67.90%), Postives = 71/81 (87.65%), Query Frame = 0
Query:    1 MTNTIVIRRDYLHYISKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHDPCINTAVSVRKQFRMF 81
            M  TIV+RRDYLH++ KY+R+EKRHKN+T HC+PC+ NVK GD+VTIGQCRPL+KT+RFNVL H+P  N +V+V+KQFR+F
Sbjct:  189 MKRTIVVRRDYLHFVRKYKRYEKRHKNVTAHCSPCFVNVKPGDVVTIGQCRPLAKTIRFNVLTHEPSTNQSVNVKKQFRVF 269          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7741.18223.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQB6_ECTSI3.100e-5296.30Ribosomal_S17_N domain-containing protein n=1 Tax=... [more]
A0A835Z9X9_9STRA7.310e-4377.78Ribosomal protein S17-domain-containing protein n=... [more]
A0A7S2XWS0_9STRA3.540e-4177.78Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7R9U3I9_9STRA8.740e-3970.37Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S4WCA2_9DINO9.540e-3972.84Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
A0A4D9CZU0_9STRA1.070e-3770.37Ribosomal_S17_N domain-containing protein n=3 Tax=... [more]
F0XZW5_AURAN1.660e-3770.37Ribosomal_S17_N domain-containing protein n=3 Tax=... [more]
A0A812UUF3_SYMMI2.180e-3769.14RPS11 protein n=2 Tax=Symbiodinium microadriaticum... [more]
A0A7S1XVW4_9STRA6.520e-3767.90Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S1UA06_9STRA1.020e-3567.90Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000266Ribosomal protein S17/S11PRINTSPR00973RIBOSOMALS17coord: 52..59
score: 73.25
coord: 8..31
score: 35.33
coord: 42..52
score: 63.27
IPR000266Ribosomal protein S17/S11PFAMPF00366Ribosomal_S17coord: 1..63
e-value: 3.7E-24
score: 84.6
IPR000266Ribosomal protein S17/S11PANTHERPTHR1074440S RIBOSOMAL PROTEIN S11 FAMILY MEMBERcoord: 1..81
NoneNo IPR availableGENE3D2.40.50.1000coord: 1..81
e-value: 4.1E-34
score: 119.5
NoneNo IPR availablePANTHERPTHR10744:SF25coord: 1..81
NoneNo IPR availablePRODOMPD001295coord: 1..59
e-value: 6.0E-22
score: 251.0
IPR019979Ribosomal protein S17, conserved sitePROSITEPS00056RIBOSOMAL_S17coord: 42..54
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 1..64

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7741contigM-pyrifera_M_contig7741:763..2533 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7741.18223.1mRNA_M-pyrifera_M_contig7741.18223.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig7741 737..3342 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig7741.18223.1 ID=prot_M-pyrifera_M_contig7741.18223.1|Name=mRNA_M-pyrifera_M_contig7741.18223.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=82bp
MTNTIVIRRDYLHYISKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQC
RPLSKTVRFNVLEHDPCINTAVSVRKQFRMF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000266Ribosomal_S17/S11
IPR019979Ribosomal_S17_CS
IPR012340NA-bd_OB-fold