mRNA_M-pyrifera_M_contig104472.964.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig104472.964.1 vs. uniprot
Match: A0A7S1CDG2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CDG2_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 2.180e-18 Identity = 45/82 (54.88%), Postives = 58/82 (70.73%), Query Frame = 1 Query: 1 KVIDLRAGMERVVIGTLFKEMRLHPSVLAEFTKKGRALQVHR-ENFCSSGDSLVLEDESGRVALAGDGVPVGTLVTGIVVAV 243 K+IDL G +V IGTL+K+MRL P+VL +F+ + V R +NF D+LVLEDESGRV L G +P+G LVTG+VVAV Sbjct: 105 KIIDLTVGKVQVAIGTLYKDMRLKPNVLDDFSHERSLAPVARLDNFVDEADTLVLEDESGRVPLVGSRLPLGDLVTGVVVAV 186
BLAST of mRNA_M-pyrifera_M_contig104472.964.1 vs. uniprot
Match: C1EE38_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EE38_MICCC) HSP 1 Score: 84.3 bits (207), Expect = 2.990e-17 Identity = 45/85 (52.94%), Postives = 60/85 (70.59%), Query Frame = 1 Query: 1 KVIDLRAGMERVVIGTLFKEMRLHPSVLAEFTKKG--RALQVHRENFCSSGDSLVLEDESGRVALAGDGVPVGTLVTGIVVAVRG 249 KV+DL+ G E VV+GTL+K+M+L PS+L E+ K+ +A +V + F S DSLVLEDE RV L G GV V VTG+V+AV+G Sbjct: 69 KVLDLKEGEECVVMGTLYKDMKLKPSILDEYVKEAGAKASEVAAKKFVSDDDSLVLEDEGARVRLTGKGVAVDCFVTGVVLAVKG 153
BLAST of mRNA_M-pyrifera_M_contig104472.964.1 vs. uniprot
Match: A0A7S1CVV2_9CHLO (Hypothetical protein n=1 Tax=Picochlorum oklahomense TaxID=249345 RepID=A0A7S1CVV2_9CHLO) HSP 1 Score: 83.6 bits (205), Expect = 5.750e-17 Identity = 43/83 (51.81%), Postives = 59/83 (71.08%), Query Frame = 1 Query: 1 KVIDLRAGMERVVIGTLFKEMRLHPSVLAEFTKKGRALQVHRENFCSSGDSLVLEDESGRVALAGDGVPVGTLVTGIVVAVRG 249 +V+D+ E ++GTL+KEM L PS+L E+TK A Q+ F +GD LVLEDE GRV+L GD + VGT+VTG++VAV+G Sbjct: 86 RVLDVPEDKEVCIVGTLYKEMSLKPSILDEYTKDVGA-QLGGNRFTQAGDVLVLEDEGGRVSLVGDALDVGTMVTGVIVAVKG 167
BLAST of mRNA_M-pyrifera_M_contig104472.964.1 vs. uniprot
Match: A0A7S0T386_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0T386_9CHLO) HSP 1 Score: 76.3 bits (186), Expect = 1.390e-15 Identity = 42/85 (49.41%), Postives = 55/85 (64.71%), Query Frame = 1 Query: 1 KVIDLRAGMERVVIGTLFKEMRLHPSVLAEFTKKG--RALQVHRENFCSSGDSLVLEDESGRVALAGDGVPVGTLVTGIVVAVRG 249 KV+DL+ G E VV+GTL+K+MRL PS+L E+TK V F + D++VLEDE RV L G V + LVTGI++A RG Sbjct: 68 KVLDLKEGEECVVMGTLYKDMRLRPSILDEYTKDAGLAGSDVGSGKFIAGDDTVVLEDEGARVKLGGAAVHIPRLVTGIIMAARG 152
BLAST of mRNA_M-pyrifera_M_contig104472.964.1 vs. uniprot
Match: A0A0D2MY13_9CHLO (DNA polymerase delta small subunit (Fragment) n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2MY13_9CHLO) HSP 1 Score: 75.9 bits (185), Expect = 1.720e-15 Identity = 43/87 (49.43%), Postives = 56/87 (64.37%), Query Frame = 1 Query: 1 KVIDLRAGMERVVIGTLFKEMRLHPSVLAEFTKKGRALQ-VHRENFCSSGDSLVLEDESGRVALAGDG---VPVGTLVTGIVVAVRG 249 K + + ++ VVIGTLFK+ RL PSVL E+TK G Q + NFC + D++V+EDE R+ L G +PVG LVTG V AVRG Sbjct: 66 KTLGVGEDVDCVVIGTLFKQQRLRPSVLDEYTKDGALKQALGLTNFCDAADTIVMEDEGARLVLRGASDAALPVGVLVTGTVAAVRG 152
BLAST of mRNA_M-pyrifera_M_contig104472.964.1 vs. uniprot
Match: A0A7S2UV96_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UV96_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 2.280e-15 Identity = 43/83 (51.81%), Postives = 52/83 (62.65%), Query Frame = 1 Query: 1 KVIDLRAGMERVVIGTLFKEMRLHPSVLAEFTKKGRALQVHRENFCSSGDSLVLEDESGRVALAGDGVPVGTLVTGIVVAVRG 249 KV+ L+ VVIGTL+KEM+ P VL EF G ++ S D LVLEDESGRV L+G+ VPV L TGIV AV+G Sbjct: 58 KVVHLQENQTWVVIGTLYKEMKKKPCVLDEFQATGLTKSDESSDYTSDDDYLVLEDESGRVILSGEHVPVHDLCTGIVCAVKG 140
BLAST of mRNA_M-pyrifera_M_contig104472.964.1 vs. uniprot
Match: A0A7S3Y0Y1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0Y1_HETAK) HSP 1 Score: 74.7 bits (182), Expect = 2.660e-15 Identity = 40/85 (47.06%), Postives = 56/85 (65.88%), Query Frame = 1 Query: 1 KVIDLRAGMERVVIGTLFKEMRLHPSVLAEFTKKGRAL--QVHRENFCSSGDSLVLEDESGRVALAGDGVPVGTLVTGIVVAVRG 249 K++ L G +R+V+GTLFKEM P +L E + QV EN+ S D L+LEDESGR+AL G+ + VG L TG+++AV+G Sbjct: 4 KIVKLGEGNQRIVLGTLFKEMGKRPDILKEMDDLEFNIENQVELENYTSDTDRLILEDESGRIALVGE-IEVGRLCTGLIIAVKG 87
BLAST of mRNA_M-pyrifera_M_contig104472.964.1 vs. uniprot
Match: A0A453J1Y6_AEGTS (DNA_pol_D_N domain-containing protein n=4 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453J1Y6_AEGTS) HSP 1 Score: 77.0 bits (188), Expect = 5.830e-15 Identity = 42/83 (50.60%), Postives = 58/83 (69.88%), Query Frame = 1 Query: 4 VIDLRAGMERVVIGTLFKEMRLHPSVLAEFTKKGRALQ-VHRENFCSSGDSLVLEDESGRVALAGDGVPVGTLVTGIVVAVRG 249 V+ L G + V++GTL+K M+L PS+L E++K+ A+ V NF S D+L+LEDESGRVALAG +P VTG+VVA+ G Sbjct: 67 VLGLEEGKDCVLVGTLYKHMKLKPSILDEYSKERSAIPLVKPHNFMHSDDNLILEDESGRVALAG-AIPPAAYVTGVVVALHG 148
BLAST of mRNA_M-pyrifera_M_contig104472.964.1 vs. uniprot
Match: A0A388LQG3_CHABU (Reverse transcriptase domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LQG3_CHABU) HSP 1 Score: 77.0 bits (188), Expect = 1.310e-14 Identity = 42/83 (50.60%), Postives = 53/83 (63.86%), Query Frame = 1 Query: 4 VIDLRAGMERVVIGTLFKEMRLHPSVLAEFTK-KGRALQVHRENFCSSGDSLVLEDESGRVALAGDGVPVGTLVTGIVVAVRG 249 V++L G+E VIGT++K M+L PS+L E+ K + V F D L+LEDESGRV L GDGV VG VTG+VV V G Sbjct: 66 VLNLEEGVECAVIGTIYKHMQLKPSILDEYAKERSNVPLVTASKFVRDDDHLILEDESGRVKLVGDGVDVGGYVTGVVVGVLG 148
BLAST of mRNA_M-pyrifera_M_contig104472.964.1 vs. uniprot
Match: W7TUU6_9STRA (Polymerase (Dna directed) delta regulatory subunit n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TUU6_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 1.310e-14 Identity = 46/91 (50.55%), Postives = 61/91 (67.03%), Query Frame = 1 Query: 1 KVIDLRAGMER-VVIGTLFKEMRLHPSVLAEFTKKGRALQVHRE-------NFCSSGDSLVLEDESGRVALAGDGVPVGTLVTGIVVAVRG 249 K+IDL G +VIGT+FK+M L PS+L E+ + ALQ + N+ SS D+LVLEDESGRV L+G+ +PVG VTG+VVA +G Sbjct: 113 KIIDLVDGARTSMVIGTIFKDMPLRPSLLDEYRDEA-ALQGALQPAPGPDTNYTSSEDTLVLEDESGRVTLSGEALPVGDFVTGLVVAAKG 202 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig104472.964.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig104472.964.1 >prot_M-pyrifera_M_contig104472.964.1 ID=prot_M-pyrifera_M_contig104472.964.1|Name=mRNA_M-pyrifera_M_contig104472.964.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=75bp MERVVIGTLFKEMRLHPSVLAEFTKKGRALQVHRENFCSSGDSLVLEDESback to top mRNA from alignment at M-pyrifera_M_contig104472:1..524+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig104472.964.1 ID=mRNA_M-pyrifera_M_contig104472.964.1|Name=mRNA_M-pyrifera_M_contig104472.964.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=524bp|location=Sequence derived from alignment at M-pyrifera_M_contig104472:1..524+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig104472:1..524+ >mRNA_M-pyrifera_M_contig104472.964.1 ID=mRNA_M-pyrifera_M_contig104472.964.1|Name=mRNA_M-pyrifera_M_contig104472.964.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=450bp|location=Sequence derived from alignment at M-pyrifera_M_contig104472:1..524+ (Macrocystis pyrifera P11B4 male)back to top |