prot_L-elsbetiae_contig20290.6100.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig20290.6100.1
Unique Nameprot_L-elsbetiae_contig20290.6100.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length35
Homology
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BLAST of mRNA_L-elsbetiae_contig20290.6100.1 vs. uniprot
Match: A0A6H5L4I1_9PHAE (CPO-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4I1_9PHAE)

HSP 1 Score: 49.3 bits (116), Expect = 9.660e-6
Identity = 25/34 (73.53%), Postives = 28/34 (82.35%), Query Frame = 0 
Query:    1 MPTSVAASLDALTAGDASAAVLKRDLGELMLRPL 34
            M  S+AAS+D LTAGD S AV KRD+GELMLRPL
Sbjct:  501 MAISIAASIDGLTAGDESVAVFKRDIGELMLRPL 534
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BLAST of mRNA_L-elsbetiae_contig20290.6100.1 vs. uniprot
Match: A0A6H5JTZ2_9PHAE (CPO-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JTZ2_9PHAE)

HSP 1 Score: 49.3 bits (116), Expect = 9.670e-6
Identity = 25/31 (80.65%), Postives = 29/31 (93.55%), Query Frame = 0 
Query:    4 SVAASLDALTAGDASAAVLKRDLGELMLRPL 34
            S+AAS+DALTAGD SAAV KRD+GEL+LRPL
Sbjct:  454 SIAASIDALTAGDESAAVFKRDVGELVLRPL 484
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig20290.6100.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L4I1_9PHAE9.660e-673.53CPO-like protein n=2 Tax=Ectocarpus TaxID=2879 Rep... [more]
A0A6H5JTZ2_9PHAE9.670e-680.65CPO-like protein n=2 Tax=Ectocarpus TaxID=2879 Rep... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig20290contigL-elsbetiae_contig20290:571..675 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig20290.6100.1mRNA_L-elsbetiae_contig20290.6100.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig20290 547..1296 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig20290.6100.1 ID=prot_L-elsbetiae_contig20290.6100.1|Name=mRNA_L-elsbetiae_contig20290.6100.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=35bp
MPTSVAASLDALTAGDASAAVLKRDLGELMLRPL*
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