prot_L-elsbetiae_contig12823.2271.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12823.2271.1
Unique Nameprot_L-elsbetiae_contig12823.2271.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length38
Homology
BLAST of mRNA_L-elsbetiae_contig12823.2271.1 vs. uniprot
Match: A0A6H5KZR8_9PHAE (Ubiquitinyl hydrolase 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZR8_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 4.480e-15
Identity = 31/32 (96.88%), Postives = 32/32 (100.00%), Query Frame = 0
Query:    1 NFREEAGPCEYIVWYCRMLTSGFLKLNADRYL 32
            NFREEAGPCEYIVWYCRMLTSGFLKLNADR+L
Sbjct:  181 NFREEAGPCEYIVWYCRMLTSGFLKLNADRFL 212          
BLAST of mRNA_L-elsbetiae_contig12823.2271.1 vs. uniprot
Match: A0A024G0R5_9STRA (OTU domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G0R5_9STRA)

HSP 1 Score: 49.3 bits (116), Expect = 1.110e-5
Identity = 18/31 (58.06%), Postives = 25/31 (80.65%), Query Frame = 0
Query:    1 NFREEAGPCEYIVWYCRMLTSGFLKLNADRY 31
            +F+ E G  EY+VWY R+LT+G+LK NADR+
Sbjct:  192 DFQTEGGESEYLVWYARLLTAGYLKQNADRF 222          
BLAST of mRNA_L-elsbetiae_contig12823.2271.1 vs. uniprot
Match: A0A7S1ADL7_NOCSC (Ubiquitinyl hydrolase 1 n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1ADL7_NOCSC)

HSP 1 Score: 47.4 bits (111), Expect = 5.170e-5
Identity = 17/32 (53.12%), Postives = 24/32 (75.00%), Query Frame = 0
Query:    1 NFREEAGPCEYIVWYCRMLTSGFLKLNADRYL 32
             F EE G  EY+VWYCR L++GFLK + +R++
Sbjct:  164 QFNEENGGAEYMVWYCRALSAGFLKADPERFM 195          
BLAST of mRNA_L-elsbetiae_contig12823.2271.1 vs. uniprot
Match: M4C1S8_HYAAE (Ubiquitinyl hydrolase 1 n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C1S8_HYAAE)

HSP 1 Score: 47.0 bits (110), Expect = 7.030e-5
Identity = 16/31 (51.61%), Postives = 25/31 (80.65%), Query Frame = 0
Query:    1 NFREEAGPCEYIVWYCRMLTSGFLKLNADRY 31
            +F+ E G  EY+VWY R+LT+G++K NA+R+
Sbjct:  138 DFQTEGGEAEYLVWYMRLLTAGYMKKNAERF 168          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12823.2271.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KZR8_9PHAE4.480e-1596.88Ubiquitinyl hydrolase 1 n=2 Tax=Ectocarpus TaxID=2... [more]
A0A024G0R5_9STRA1.110e-558.06OTU domain-containing protein n=1 Tax=Albugo candi... [more]
A0A7S1ADL7_NOCSC5.170e-553.13Ubiquitinyl hydrolase 1 n=1 Tax=Noctiluca scintill... [more]
M4C1S8_HYAAE7.030e-551.61Ubiquitinyl hydrolase 1 n=1 Tax=Hyaloperonospora a... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042467Peptidase C65, otubain, subdomain 2GENE3D1.20.1300.20coord: 1..36
e-value: 3.2E-5
score: 26.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12823contigL-elsbetiae_contig12823:117..230 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12823.2271.1mRNA_L-elsbetiae_contig12823.2271.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12823 117..230 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12823.2271.1 ID=prot_L-elsbetiae_contig12823.2271.1|Name=mRNA_L-elsbetiae_contig12823.2271.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=38bp
NFREEAGPCEYIVWYCRMLTSGFLKLNADRYLCTSQQ*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042467Peptidase_C65_otubain_sub2