prot_L-elsbetiae_contig12653.2143.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12653.2143.1
Unique Nameprot_L-elsbetiae_contig12653.2143.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length137
Homology
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BLAST of mRNA_L-elsbetiae_contig12653.2143.1 vs. uniprot
Match: A0A6H5L840_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L840_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 3.370e-9
Identity = 43/97 (44.33%), Postives = 51/97 (52.58%), Query Frame = 0 
Query:   18 ASGSGEAVVADRMTCATAGRRCTVPGTRRGRVMATGAIVSSIAPRNDAPHVFRSTSPSEFGRVHGG--CWCVQCAPILALHWETVLVIDANGHAYEL 112
            A G G A V   +TCATAGR CTV GTR G V+ +G I +  + R  A  VF     SEFGR+  G  CW VQC  +       V  ID  G  YE+
Sbjct:  281 ARGGGVAAVEGHVTCATAGRSCTVLGTRHGAVLFSGFITTMTSNRFCA--VF-----SEFGRLGDGLRCWRVQCECLPVTDTTVVTAIDPAGQVYEV 370
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BLAST of mRNA_L-elsbetiae_contig12653.2143.1 vs. uniprot
Match: D8LDL9_ECTSI (Hect E3 ubiquitin ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDL9_ECTSI)

HSP 1 Score: 60.5 bits (145), Expect = 5.470e-8
Identity = 41/97 (42.27%), Postives = 50/97 (51.55%), Query Frame = 0 
Query:   18 ASGSGEAVVADRMTCATAGRRCTVPGTRRGRVMATGAIVSSIAPRNDAPHVFRSTSPSEFGRVHGG--CWCVQCAPILALHWETVLVIDANGHAYEL 112
            A G G   V   +TCATAGR CTV GTR G V+ +G +  S    N    VF     SEFGR+  G  CW VQC  + A     V+ ID  G  Y++
Sbjct:  282 ARGGGVVAVEGHVTCATAGRSCTVLGTRHGVVLFSGLM--STMTSNHFCAVF-----SEFGRLGDGLRCWRVQCECLPATGTTLVMAIDPAGQVYDV 371
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12653.2143.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L840_9PHAE3.370e-944.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDL9_ECTSI5.470e-842.27Hect E3 ubiquitin ligase n=1 Tax=Ectocarpus silicu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12653contigL-elsbetiae_contig12653:4882..5292 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12653.2143.1mRNA_L-elsbetiae_contig12653.2143.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12653 2639..5309 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12653.2143.1 ID=prot_L-elsbetiae_contig12653.2143.1|Name=mRNA_L-elsbetiae_contig12653.2143.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=137bp
MGVGGGGGGVRGAAAVGASGSGEAVVADRMTCATAGRRCTVPGTRRGRVM
ATGAIVSSIAPRNDAPHVFRSTSPSEFGRVHGGCWCVQCAPILALHWETV
LVIDANGHAYELPFAIESSSLLVAHVRKKQRGRERR*
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