prot_L-elsbetiae_contig11613.1399.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig11613.1399.1
Unique Nameprot_L-elsbetiae_contig11613.1399.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length80
Homology
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BLAST of mRNA_L-elsbetiae_contig11613.1399.1 vs. uniprot
Match: D7FXY7_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY7_ECTSI)

HSP 1 Score: 62.4 bits (150), Expect = 1.370e-9
Identity = 38/74 (51.35%), Postives = 50/74 (67.57%), Query Frame = 0 
Query:   10 LLVKAGADL---WEEDLCYTGSTPLDLAAENGPSKMMRVLIEARASPNSRRLVGSTPLFRAALEKHVDAVKVLL 80
            +LV+AGA L    ++ LC    TPL +AA NG +  M  L+EA A+ NSRR  G+TPLF AA E +VDAV++LL
Sbjct:    1 MLVEAGAPLEVATKQQLC----TPLQIAAVNGCAASMTTLLEAGANLNSRRFDGATPLFLAAWEGNVDAVRLLL 70
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BLAST of mRNA_L-elsbetiae_contig11613.1399.1 vs. uniprot
Match: UPI001F5D8C51 (ankyrin repeat, PH and SEC7 domain containing protein secG-like n=1 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5D8C51)

HSP 1 Score: 49.3 bits (116), Expect = 6.370e-5
Identity = 27/71 (38.03%), Postives = 42/71 (59.15%), Query Frame = 0 
Query:   10 LLVKAGADLWEEDLCYTGSTPLDLAAENGPSKMMRVLIEARASPNSRRLVGSTPLFRAALEKHVDAVKVLL 80
            L+ ++G D+    +  TG+TP+  AA  G  ++MR L++    P      GSTPL RAA+  H +AV++LL
Sbjct:   57 LVEESGIDV--NSVSKTGATPMSYAAREGNVQVMRYLLDRGGDPAMPDERGSTPLHRAAVHGHCEAVRLLL 125
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11613.1399.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FXY7_ECTSI1.370e-951.35EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
UPI001F5D8C516.370e-538.03ankyrin repeat, PH and SEC7 domain containing prot... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 26..55
e-value: 0.0097
score: 25.1
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 26..58
score: 10.152
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 59..80
score: 8.656
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..80
e-value: 6.6E-18
score: 66.7
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 2..80
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 3..80
e-value: 8.2E-11
score: 42.3
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..80
score: 20.792
NoneNo IPR availablePANTHERPTHR24189:SF55IQ MOTIF AND ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN LOC642574-RELATEDcoord: 3..80
NoneNo IPR availablePANTHERPTHR24189FAMILY NOT NAMEDcoord: 3..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11613contigL-elsbetiae_contig11613:1198..1437 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11613.1399.1mRNA_L-elsbetiae_contig11613.1399.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig11613 1198..1437 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig11613.1399.1 ID=prot_L-elsbetiae_contig11613.1399.1|Name=mRNA_L-elsbetiae_contig11613.1399.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=80bp
QGGHPAATKLLVKAGADLWEEDLCYTGSTPLDLAAENGPSKMMRVLIEAR
ASPNSRRLVGSTPLFRAALEKHVDAVKVLL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom