mRNA_L-elsbetiae_contig9304.18305.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9304.18305.1 vs. uniprot
Match: D7FYM6_ECTSI (Thioredoxin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYM6_ECTSI) HSP 1 Score: 419 bits (1076), Expect = 2.840e-146 Identity = 205/260 (78.85%), Postives = 237/260 (91.15%), Query Frame = 2 Query: 2 RRWMRFVHAHYVVNASMMLSYAVLRYFMSSPHLTTKETWTGFSQETEVLGLAAATLLSKYRKMATFDELIDRLFFLGKAAVAVLLFFIGVPHMVSYLIIWTACSLVVPYPRFLFPPEVAFLSPGEFQSMVRSPS-QAPGQRVAWLVMFYADWCSASHNLKPMFGALARRYADKNRRFAVVDVLAHPEIAEDLNISTAGTSKQIPTLALFASGREICRLPTFASDGRVVRARMDEGGVTKYFELDKEFRTASYSRRG-RGK 775 RRW RFVH HYVVNA+++L+Y ++R++MS+P LT++ TWTGFSQETE++GLA ATL+SKYRKMATFDE + R F +GKAAVAVLLFF+G+PHMV YLI+WTACSLVVPYPRF+ P EV+ L+PGEFQSMVRS S QAPG+RVAWLVMF+ADWCS+SHNL+PMFGALARRYADKNRRFAVVD++AHPE AEDLNI+TAGTSKQ+PTLALFASGRE+CRLPTFASDG VVRARMDE GV YFELD+EFRT SYSRRG RGK Sbjct: 10 RRWARFVHLHYVVNAALVLNYGIVRWYMSAPRLTSQATWTGFSQETEIIGLATATLVSKYRKMATFDEFLARFFVIGKAAVAVLLFFVGIPHMVWYLILWTACSLVVPYPRFVLPSEVSTLNPGEFQSMVRSSSAQAPGERVAWLVMFHADWCSSSHNLQPMFGALARRYADKNRRFAVVDIVAHPETAEDLNINTAGTSKQLPTLALFASGREVCRLPTFASDGSVVRARMDERGVINYFELDQEFRTTSYSRRGLRGK 269
BLAST of mRNA_L-elsbetiae_contig9304.18305.1 vs. uniprot
Match: A0A6H5JZG0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZG0_9PHAE) HSP 1 Score: 161 bits (408), Expect = 2.400e-46 Identity = 87/133 (65.41%), Postives = 100/133 (75.19%), Query Frame = 2 Query: 140 EVLGLAAATLLSKYRKMATFDELIDRLFFLGKAAVAVLLFFIGVPHMVSYLIIWTACSLVVPYPRFLFPPEVAFLSPGEFQSMVRSPS-QAPGQRVAWLVMFYADWCSASHNLKPMFGALARRYADKNRRFAV 535 EV+GLA ATL+SKYRKMATFDE + R F +GKAAVAVLLFF+G+PHMV YLI+WT EV+ L+PGEFQSMVRS S QAPG RVAWLVMF+ADWCS+S NL+PMFGALARR RF + Sbjct: 2 EVIGLATATLVSKYRKMATFDEFLARFFVIGKAAVAVLLFFVGIPHMVWYLILWT---------------EVSTLNPGEFQSMVRSSSAQAPGDRVAWLVMFHADWCSSSRNLQPMFGALARRCVRCGFRFMI 119
BLAST of mRNA_L-elsbetiae_contig9304.18305.1 vs. uniprot
Match: A0A6V1S3B1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1S3B1_HETAK) HSP 1 Score: 159 bits (402), Expect = 4.160e-44 Identity = 94/253 (37.15%), Postives = 142/253 (56.13%), Query Frame = 2 Query: 14 RFVHAHYVVNASMMLSYAVLRYFMSSPH-LTTKETWTGFSQETEVLGLAAATLLSKYRKMATFDELIDRLFFLGKAAVAVLLFFIGVPHMVSYLIIWTACSLVVPYPRFLFPPEVAFLSPGEFQSMVRSPSQAPGQRVAWLVMFYADWCSASHNLKPMFGALARRYADKNR-----RFAVVDVLAHPEIAEDLNISTAGTSKQIPTLALFASGREICRLPTFASDGRVVRARMDEGGVTKYFELDKEFRTASY 754 RF+H +Y+ N ++L Y ++R+ P L T GF++E E++ LA L+ K+ + AT D+ +D++F GK A LLF+I P YL+I +L V P + + + G FQ +V++ R A LVMF+ DWC +P+F +A R+ RFA VD++ PE+A++ + +GTSKQ+PT LF G E+ R+PTF SDG+VV+ D G+ K+FELDK+F SY Sbjct: 7 RFLHPYYLTNFLLLLIYPLVRFTYGIPDSLRDTRTMLGFTKEVEMILLAFVALIVKFARAATLDQYLDKVFLFGKMANGALLFYINRPFATGYLVI-AFVTLAVLNPPKILNLSIESMGMGTFQEVVKN---CRDPRRAALVMFHCDWCKDCTLTEPIFSRIADRFRGGGXXXGPYRFAKVDLVRFPELADEYAVDVSGTSKQLPTFILFYKGEEVKRMPTFKSDGQVVKTGFDVKGMMKWFELDKDFTQTSY 255
BLAST of mRNA_L-elsbetiae_contig9304.18305.1 vs. uniprot
Match: A0A6S8C4H8_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A6S8C4H8_9STRA) HSP 1 Score: 120 bits (301), Expect = 8.520e-29 Identity = 79/250 (31.60%), Postives = 132/250 (52.80%), Query Frame = 2 Query: 14 RFVHAHYVVNASMMLSYAVLRYFMSSPHLTTKE-TWTGFSQETEVLGLAAATLLSKYRKMATFDELIDRLFFLGKAAVAVLLFFIGVPHMVS-YLIIWTACSLVVPYPRFLFPPEVAFLSPGEF-QSMVRSPSQAPGQRVAWLVMFYADWCSASHNLKPMFGALARRYADKNRRFAVVDVLAHPEIAEDLNISTAGTSKQIPTLALFASGREICRLPTFASDGRVVRARMDEGGVTKYFELDKEFRTASY 754 ++ +Y+ NAS++LS+ +LR F+ ++ TW S+E EV L LL+K R+ ++ E + R+F GK A+ + LF G YL I + +VVP P+F V L F ++++R+P ++V ADWC + ++ P+F +LA +Y + R+F VDV +P +A I+T T+KQ+PT LF G+E RLP F D ++V+ + + + L+K + A + Sbjct: 28 QWTQCYYLSNASVLLSWIILRSFIPGREFLDEQGTWFA-SKEREVYMLVGFGLLTKARRASSTHEYLFRIFLYGKIAILLCLFRSGSLATTGLYLCILSFLYVVVPIPKFAGDELVIKLDTARFTETVLRTPHPDDKSAPIYIVALVADWCESCTHIAPIFCSLAAQYTSRRRKFIAVDVGHNPNVARRFQINTTFTTKQLPTFILFFHGQEKRRLPYFGDDLKIVKTKFTRDSLESFLLLNKPVKEAVF 276
BLAST of mRNA_L-elsbetiae_contig9304.18305.1 vs. uniprot
Match: A0A1X6P1N4_PORUM (Thioredoxin domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P1N4_PORUM) HSP 1 Score: 100 bits (248), Expect = 1.980e-21 Identity = 68/246 (27.64%), Postives = 122/246 (49.59%), Query Frame = 2 Query: 14 RFVHAHYVVNASMMLSYAVLRYFMSSPHLTTKETWTGFSQETEVLGLAAATLLSKYRKMATFDELIDRLFFLGKAAVAVLLFFIGVPHMVSYLIIWTACSLVVPYPRFLFPPEVAFLSPGEFQSMVRSPSQAPGQRVAWLVMFYADWCSASHNLKPMFGALARRYADKNRRFAVVDVLAHPEIAEDLNISTAGTSKQIPTLALFASGREICRLPTFASDG-RVVRARMDEGGVTKYFELDKEFRTA 748 RF+ +Y++NA ++ ++ + R L T + GF++E+++ A +++ T D + + + A+ V+LFF+ ++I++T LV P PR P V+ L+ F V + ++ V WL +A W L P+ L Y R+A +D ++A DL++STA TS+Q+PT+ +F+ G+E+ RLPT DG ++ +M + + LD+ R A Sbjct: 13 RFLSPYYLLNAILIGAFVLFRIRDPPAELATVDPM-GFTKESQIYFCAGLMYVTRALSAPTLDVYLSSVLLFTRVAIIVVLFFMSPALAAVFVILFTFVGLVFPQPRATTPAAVSVLNRVSFAERV-TRNKHKTITVVWL---HAPWSPRCTGLAPLLNRLVAAYDHPRLRWAKLDASVWTDVAADLDVSTAATSQQLPTVVVFSQGKELARLPTLGRDGGKLEGLKMTYASLVEGLGLDERLRVA 253
BLAST of mRNA_L-elsbetiae_contig9304.18305.1 vs. uniprot
Match: A0A6Q2YXK4_ESOLU (Thioredoxin domain-containing protein n=3 Tax=Esox lucius TaxID=8010 RepID=A0A6Q2YXK4_ESOLU) HSP 1 Score: 98.6 bits (244), Expect = 1.200e-20 Identity = 59/213 (27.70%), Postives = 104/213 (48.83%), Query Frame = 2 Query: 131 QETEVLGLAAATLLSKYRKMATFDELIDRLFFLGKAAVAVLLFFIGVPHMVSYLIIWTACSLVVPYPRFLFPPEVAFLSPGEFQSMVRSPSQAPGQRVAWLVMFYADWCSASHNLKPMFGALARRYADKNRRFAVVDVLAHPEIAEDLNISTAGTSKQIPTLALFASGREICRLPTFASDGRVVRARMDEGGVTKYFELDKEFRTASYSRRGR 769 +E E+L +A ++ K R+ T ++ LF K A +L F + + + Y + TA + P ++ P + + S + + S RV W+V FYA+W S + +F L+ +Y RF +D + E+A+ +ST+ ++Q+P+L LF SGRE+ R P S R V E V + F L++ ++ + ++GR Sbjct: 64 REVEILMFLSAIVMMKNRRAITLEQHAGNLFMFSKVANVILFFRLDIRLGILYFALITAFVMTCKQPLYMGPEYIKYFSDKTIDAELNQDS-----RVTWIVEFYANWSSECQSFASVFANLSLKYNCTGLRFGKIDAGRYDEVAKRYQVSTSPLARQLPSLVLFQSGREVMRRPMVDSKRRAVSWTFSEENVIREFNLNELYQASKQMKKGR 271
BLAST of mRNA_L-elsbetiae_contig9304.18305.1 vs. uniprot
Match: UPI0015FAFC08 (thioredoxin-related transmembrane protein 2-like isoform X1 n=2 Tax=Oncorhynchus keta TaxID=8018 RepID=UPI0015FAFC08) HSP 1 Score: 96.3 bits (238), Expect = 5.700e-20 Identity = 61/216 (28.24%), Postives = 104/216 (48.15%), Query Frame = 2 Query: 131 QETEVLGLAAATLLSKYRKMATFDELIDRLFFLGKAAVAVLLFFIGVPHMVSYLIIWTACSLVVPYPRFLFPPEVAFLSPGEFQSMVRSPSQAPGQRVAWLVMFYADWCSASHNLKPMFGALARRYADKNRRFAVVDVLAHPEIAEDLNISTAGTSKQIPTLALFASGREICRLPTFASDGRVVRARMDEGGVTKYFELDKEFRTASYSRRGRGKN 778 ++ E+L +A ++ K R+ T ++ LF K A +L F + + + Y + A + P ++ P + + S + + RV W+V FYA+W + P+F L+ +Y RF +D + E+A+ +ST+ +KQ+PTL LF SGRE+ R P + R V E + + F L++ F AS +GRG+N Sbjct: 45 RKVEILMFLSAIVMMKNRRAITLEQHAGNLFMFSKVANVILFFRLDIRLGIFYFALCIAFVMTCKPPLYMGPEYIKYFSEKTIDEELNHDT-----RVTWIVEFYANWSPQCQSFAPVFAXLSLKYNCAGLRFGKIDAGRYGEVAQRYKVSTSPLAKQLPTLVLFQSGREVMRRPMVDNKCRAVSWTFSEENIIREFNLNELFE-ASKKIKGRGEN 254
BLAST of mRNA_L-elsbetiae_contig9304.18305.1 vs. uniprot
Match: A0A4W5L1F1_9TELE (Thioredoxin-related transmembrane protein 2a n=21 Tax=Salmonidae TaxID=8015 RepID=A0A4W5L1F1_9TELE) HSP 1 Score: 97.1 bits (240), Expect = 8.150e-20 Identity = 58/214 (27.10%), Postives = 102/214 (47.66%), Query Frame = 2 Query: 131 QETEVLGLAAATLLSKYRKMATFDELIDRLFFLGKAAVAVLLFFIGVPHMVSYLIIWTACSLVVPYPRFLFPPEVAFLSPGEFQSMVRSPSQAPGQRVAWLVMFYADWCSASHNLKPMFGALARRYADKNRRFAVVDVLAHPEIAEDLNISTAGTSKQIPTLALFASGREICRLPTFASDGRVVRARMDEGGVTKYFELDKEFRTASYSRRGRG 772 +E E+L +A ++ K R+ T ++ LF K A +L F + + + Y ++ A + P ++ P + + S + + RV W+V FYA+W + P+F L+ +Y RF +D + E+A+ +ST+ +KQ+P+L LF SGRE+ R P R V E + + F L++ F + ++GRG Sbjct: 107 REVEILMFLSAIVMMKNRRAITIEQHAGNLFMFSKVANVILFFRLDIRLGILYFLLCIAFVMTCKPPLYMGPEYIKYFSEKTIDEELNHDT-----RVTWIVEFYANWAPECQSFAPVFADLSLKYNCTGLRFGKIDAGRYGEVAQRYKVSTSPLAKQLPSLVLFQSGREVMRRPMVDIKFRAVSWTFSEENIIREFNLNELFEASKKIKKGRG 315
BLAST of mRNA_L-elsbetiae_contig9304.18305.1 vs. uniprot
Match: UPI001AAD9EB8 (thioredoxin-related transmembrane protein 2 n=2 Tax=Ranoidea TaxID=30352 RepID=UPI001AAD9EB8) HSP 1 Score: 95.5 bits (236), Expect = 1.410e-19 Identity = 54/206 (26.21%), Postives = 103/206 (50.00%), Query Frame = 2 Query: 131 QETEVLGLAAATLLSKYRKMATFDELIDRLFFLGKAAVAVLLFFIGVPHMVSYLIIWTACSLVVPYPRFLFPPEVAFLSPGEFQSMVRSPSQAPGQRVAWLVMFYADWCSASHNLKPMFGALARRYADKNRRFAVVDVLAHPEIAEDLNISTAGTSKQIPTLALFASGREICRLPTFASDGRVVRARMDEGGVTKYFELDKEFRTA 748 +E E+L +A ++ K R+ T ++ + +F K A +L F + + + Y+ + + P ++ P + + + + ++S +RV WLV F+A+W S + P++ L+ +Y +F VD+ +P+++ +ST+ SKQ+PTL LF SG+E+ R P GR V V + F L++ ++ A Sbjct: 64 REVEILMFLSAIVMMKNRRSITIEQHVGNIFMFSKVANTILFFRLDLRMGLLYVTLCLVFLMTCKPPLYMGPEHIKYFNDKTMEEEMQSD-----RRVTWLVEFFANWSSECQSFAPIYAELSLKYNCAGLKFGKVDIGRYPDVSTKYGVSTSPLSKQLPTLILFQSGKEVLRRPQVDKKGRAVSWSFTPENVIREFNLNELYQKA 264
BLAST of mRNA_L-elsbetiae_contig9304.18305.1 vs. uniprot
Match: A0A6I9XCY0_9HYME (thioredoxin-related transmembrane protein 2 homolog n=2 Tax=Formicidae TaxID=36668 RepID=A0A6I9XCY0_9HYME) HSP 1 Score: 94.7 bits (234), Expect = 1.760e-19 Identity = 71/242 (29.34%), Postives = 115/242 (47.52%), Query Frame = 2 Query: 20 VHAHYVVNASMMLSYAVLRYF-MSSPHLTTKETWTGFSQETEVLGLAAATLLSKYRKMA--TFDELIDRLFFLGKAAVAVLLFFIGVPHMVSYLIIWTACSLVVPYPRFLFPPEVAFL--SPGEFQSMVRSPSQAPGQRVAWLVMFYADWCSASHNLKPMFGALARRYADKNRRFAVVDVLAHPEIAEDLNISTAGTSKQIPTLALFASGREICRLPTFASDGRVVRARMDEGGVTKYFELD 730 V +Y++N + +SY + + F + ++ ++ +ETE+L ++ + RK T + F K A +L F+ V + + I+ C+L++P P + P V +L + G + + R RV WLV FY W A P+F L+ Y +N +F VD+ +P+ A+ IS A TSKQ+PTL LF SGREI R P G+ V+ V +L+ Sbjct: 11 VKPYYLINILLSISYILSKRFPVICNYIFVQDDCELDGRETEILFFLMIVIMMRTRKTGSVTMINYLTSSFVYTKVANLILWFYADVRMGILFAFIFILCALILPEPTYQGPENVIYLHGADGLQEELQRDT------RVVWLVAFYTAWNPACVTFAPIFSELSVEYTLENFKFGKVDIGRYPDAAKRHRISDASTSKQLPTLILFKSGREIERRPYMDHKGKFVKFLFSLDNVKAALDLN 246 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9304.18305.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9304.18305.1 >prot_L-elsbetiae_contig9304.18305.1 ID=prot_L-elsbetiae_contig9304.18305.1|Name=mRNA_L-elsbetiae_contig9304.18305.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=257bp MRFVHAHYVVNASMMLSYAVLRYFMSSPHLTTKETWTGFSQETEVLGLAAback to top mRNA from alignment at L-elsbetiae_contig9304:1777..5832+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9304.18305.1 ID=mRNA_L-elsbetiae_contig9304.18305.1|Name=mRNA_L-elsbetiae_contig9304.18305.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4056bp|location=Sequence derived from alignment at L-elsbetiae_contig9304:1777..5832+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9304:1777..5832+ >mRNA_L-elsbetiae_contig9304.18305.1 ID=mRNA_L-elsbetiae_contig9304.18305.1|Name=mRNA_L-elsbetiae_contig9304.18305.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1542bp|location=Sequence derived from alignment at L-elsbetiae_contig9304:1777..5832+ (Laminarionema elsbetiae ELsaHSoW15)back to top |