prot_L-elsbetiae_contig9304.18305.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9304.18305.1
Unique Nameprot_L-elsbetiae_contig9304.18305.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length257
Homology
BLAST of mRNA_L-elsbetiae_contig9304.18305.1 vs. uniprot
Match: D7FYM6_ECTSI (Thioredoxin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYM6_ECTSI)

HSP 1 Score: 410 bits (1055), Expect = 3.980e-143
Identity = 202/256 (78.91%), Postives = 234/256 (91.41%), Query Frame = 0
Query:    2 RFVHAHYVVNASMMLSYAVLRYFMSSPHLTTKETWTGFSQETEVLGLAAATLLSKYRKMATFDELIDRLFFLGKAAVAVLLFFIGVPHMVSYLIIWTACSLVVPYPRFLFPPEVAFLSPGEFQSMVRSPS-QAPGQRVAWLVMFYADWCSASHNLKPMFGALARRYADKNRRFAVVDVLAHPEIAEDLNISTAGTSKQIPTLALFASGREICRLPTFASDGRVVRARMDEGGVTKYFELDKEFRTASYSRRG-RGK 255
            RFVH HYVVNA+++L+Y ++R++MS+P LT++ TWTGFSQETE++GLA ATL+SKYRKMATFDE + R F +GKAAVAVLLFF+G+PHMV YLI+WTACSLVVPYPRF+ P EV+ L+PGEFQSMVRS S QAPG+RVAWLVMF+ADWCS+SHNL+PMFGALARRYADKNRRFAVVD++AHPE AEDLNI+TAGTSKQ+PTLALFASGRE+CRLPTFASDG VVRARMDE GV  YFELD+EFRT SYSRRG RGK
Sbjct:   14 RFVHLHYVVNAALVLNYGIVRWYMSAPRLTSQATWTGFSQETEIIGLATATLVSKYRKMATFDEFLARFFVIGKAAVAVLLFFVGIPHMVWYLILWTACSLVVPYPRFVLPSEVSTLNPGEFQSMVRSSSAQAPGERVAWLVMFHADWCSSSHNLQPMFGALARRYADKNRRFAVVDIVAHPETAEDLNINTAGTSKQLPTLALFASGREVCRLPTFASDGSVVRARMDERGVINYFELDQEFRTTSYSRRGLRGK 269          
BLAST of mRNA_L-elsbetiae_contig9304.18305.1 vs. uniprot
Match: A0A6H5JZG0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZG0_9PHAE)

HSP 1 Score: 161 bits (408), Expect = 2.190e-46
Identity = 87/133 (65.41%), Postives = 100/133 (75.19%), Query Frame = 0
Query:   44 EVLGLAAATLLSKYRKMATFDELIDRLFFLGKAAVAVLLFFIGVPHMVSYLIIWTACSLVVPYPRFLFPPEVAFLSPGEFQSMVRSPS-QAPGQRVAWLVMFYADWCSASHNLKPMFGALARRYADKNRRFAV 175
            EV+GLA ATL+SKYRKMATFDE + R F +GKAAVAVLLFF+G+PHMV YLI+WT               EV+ L+PGEFQSMVRS S QAPG RVAWLVMF+ADWCS+S NL+PMFGALARR      RF +
Sbjct:    2 EVIGLATATLVSKYRKMATFDEFLARFFVIGKAAVAVLLFFVGIPHMVWYLILWT---------------EVSTLNPGEFQSMVRSSSAQAPGDRVAWLVMFHADWCSSSRNLQPMFGALARRCVRCGFRFMI 119          
BLAST of mRNA_L-elsbetiae_contig9304.18305.1 vs. uniprot
Match: A0A6V1S3B1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1S3B1_HETAK)

HSP 1 Score: 158 bits (400), Expect = 7.540e-44
Identity = 94/253 (37.15%), Postives = 142/253 (56.13%), Query Frame = 0
Query:    2 RFVHAHYVVNASMMLSYAVLRYFMSSPH-LTTKETWTGFSQETEVLGLAAATLLSKYRKMATFDELIDRLFFLGKAAVAVLLFFIGVPHMVSYLIIWTACSLVVPYPRFLFPPEVAFLSPGEFQSMVRSPSQAPGQRVAWLVMFYADWCSASHNLKPMFGALARRYADKNR-----RFAVVDVLAHPEIAEDLNISTAGTSKQIPTLALFASGREICRLPTFASDGRVVRARMDEGGVTKYFELDKEFRTASY 248
            RF+H +Y+ N  ++L Y ++R+    P  L    T  GF++E E++ LA   L+ K+ + AT D+ +D++F  GK A   LLF+I  P    YL+I    +L V  P  +    +  +  G FQ +V++       R A LVMF+ DWC      +P+F  +A R+          RFA VD++  PE+A++  +  +GTSKQ+PT  LF  G E+ R+PTF SDG+VV+   D  G+ K+FELDK+F   SY
Sbjct:    7 RFLHPYYLTNFLLLLIYPLVRFTYGIPDSLRDTRTMLGFTKEVEMILLAFVALIVKFARAATLDQYLDKVFLFGKMANGALLFYINRPFATGYLVI-AFVTLAVLNPPKILNLSIESMGMGTFQEVVKN---CRDPRRAALVMFHCDWCKDCTLTEPIFSRIADRFRGGGXXXGPYRFAKVDLVRFPELADEYAVDVSGTSKQLPTFILFYKGEEVKRMPTFKSDGQVVKTGFDVKGMMKWFELDKDFTQTSY 255          
BLAST of mRNA_L-elsbetiae_contig9304.18305.1 vs. uniprot
Match: A0A6S8C4H8_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A6S8C4H8_9STRA)

HSP 1 Score: 119 bits (299), Expect = 1.540e-28
Identity = 79/250 (31.60%), Postives = 132/250 (52.80%), Query Frame = 0
Query:    2 RFVHAHYVVNASMMLSYAVLRYFMSSPHLTTKE-TWTGFSQETEVLGLAAATLLSKYRKMATFDELIDRLFFLGKAAVAVLLFFIGVPHMVS-YLIIWTACSLVVPYPRFLFPPEVAFLSPGEF-QSMVRSPSQAPGQRVAWLVMFYADWCSASHNLKPMFGALARRYADKNRRFAVVDVLAHPEIAEDLNISTAGTSKQIPTLALFASGREICRLPTFASDGRVVRARMDEGGVTKYFELDKEFRTASY 248
            ++   +Y+ NAS++LS+ +LR F+       ++ TW   S+E EV  L    LL+K R+ ++  E + R+F  GK A+ + LF  G       YL I +   +VVP P+F     V  L    F ++++R+P         ++V   ADWC +  ++ P+F +LA +Y  + R+F  VDV  +P +A    I+T  T+KQ+PT  LF  G+E  RLP F  D ++V+ +     +  +  L+K  + A +
Sbjct:   28 QWTQCYYLSNASVLLSWIILRSFIPGREFLDEQGTWFA-SKEREVYMLVGFGLLTKARRASSTHEYLFRIFLYGKIAILLCLFRSGSLATTGLYLCILSFLYVVVPIPKFAGDELVIKLDTARFTETVLRTPHPDDKSAPIYIVALVADWCESCTHIAPIFCSLAAQYTSRRRKFIAVDVGHNPNVARRFQINTTFTTKQLPTFILFFHGQEKRRLPYFGDDLKIVKTKFTRDSLESFLLLNKPVKEAVF 276          
BLAST of mRNA_L-elsbetiae_contig9304.18305.1 vs. uniprot
Match: A0A1X6P1N4_PORUM (Thioredoxin domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P1N4_PORUM)

HSP 1 Score: 99.4 bits (246), Expect = 3.590e-21
Identity = 68/246 (27.64%), Postives = 122/246 (49.59%), Query Frame = 0
Query:    2 RFVHAHYVVNASMMLSYAVLRYFMSSPHLTTKETWTGFSQETEVLGLAAATLLSKYRKMATFDELIDRLFFLGKAAVAVLLFFIGVPHMVSYLIIWTACSLVVPYPRFLFPPEVAFLSPGEFQSMVRSPSQAPGQRVAWLVMFYADWCSASHNLKPMFGALARRYADKNRRFAVVDVLAHPEIAEDLNISTAGTSKQIPTLALFASGREICRLPTFASDG-RVVRARMDEGGVTKYFELDKEFRTA 246
            RF+  +Y++NA ++ ++ + R       L T +   GF++E+++   A    +++     T D  +  +    + A+ V+LFF+       ++I++T   LV P PR   P  V+ L+   F   V + ++     V WL   +A W      L P+   L   Y     R+A +D     ++A DL++STA TS+Q+PT+ +F+ G+E+ RLPT   DG ++   +M    + +   LD+  R A
Sbjct:   13 RFLSPYYLLNAILIGAFVLFRIRDPPAELATVDPM-GFTKESQIYFCAGLMYVTRALSAPTLDVYLSSVLLFTRVAIIVVLFFMSPALAAVFVILFTFVGLVFPQPRATTPAAVSVLNRVSFAERV-TRNKHKTITVVWL---HAPWSPRCTGLAPLLNRLVAAYDHPRLRWAKLDASVWTDVAADLDVSTAATSQQLPTVVVFSQGKELARLPTLGRDGGKLEGLKMTYASLVEGLGLDERLRVA 253          
BLAST of mRNA_L-elsbetiae_contig9304.18305.1 vs. uniprot
Match: A0A6Q2YXK4_ESOLU (Thioredoxin domain-containing protein n=3 Tax=Esox lucius TaxID=8010 RepID=A0A6Q2YXK4_ESOLU)

HSP 1 Score: 98.6 bits (244), Expect = 1.120e-20
Identity = 59/213 (27.70%), Postives = 104/213 (48.83%), Query Frame = 0
Query:   41 QETEVLGLAAATLLSKYRKMATFDELIDRLFFLGKAAVAVLLFFIGVPHMVSYLIIWTACSLVVPYPRFLFPPEVAFLSPGEFQSMVRSPSQAPGQRVAWLVMFYADWCSASHNLKPMFGALARRYADKNRRFAVVDVLAHPEIAEDLNISTAGTSKQIPTLALFASGREICRLPTFASDGRVVRARMDEGGVTKYFELDKEFRTASYSRRGR 253
            +E E+L   +A ++ K R+  T ++    LF   K A  +L F + +   + Y  + TA  +    P ++ P  + + S     + +   S     RV W+V FYA+W S   +   +F  L+ +Y     RF  +D   + E+A+   +ST+  ++Q+P+L LF SGRE+ R P   S  R V     E  V + F L++ ++ +   ++GR
Sbjct:   64 REVEILMFLSAIVMMKNRRAITLEQHAGNLFMFSKVANVILFFRLDIRLGILYFALITAFVMTCKQPLYMGPEYIKYFSDKTIDAELNQDS-----RVTWIVEFYANWSSECQSFASVFANLSLKYNCTGLRFGKIDAGRYDEVAKRYQVSTSPLARQLPSLVLFQSGREVMRRPMVDSKRRAVSWTFSEENVIREFNLNELYQASKQMKKGR 271          
BLAST of mRNA_L-elsbetiae_contig9304.18305.1 vs. uniprot
Match: UPI0015FAFC08 (thioredoxin-related transmembrane protein 2-like isoform X1 n=2 Tax=Oncorhynchus keta TaxID=8018 RepID=UPI0015FAFC08)

HSP 1 Score: 96.3 bits (238), Expect = 5.320e-20
Identity = 61/216 (28.24%), Postives = 104/216 (48.15%), Query Frame = 0
Query:   41 QETEVLGLAAATLLSKYRKMATFDELIDRLFFLGKAAVAVLLFFIGVPHMVSYLIIWTACSLVVPYPRFLFPPEVAFLSPGEFQSMVRSPSQAPGQRVAWLVMFYADWCSASHNLKPMFGALARRYADKNRRFAVVDVLAHPEIAEDLNISTAGTSKQIPTLALFASGREICRLPTFASDGRVVRARMDEGGVTKYFELDKEFRTASYSRRGRGKN 256
            ++ E+L   +A ++ K R+  T ++    LF   K A  +L F + +   + Y  +  A  +    P ++ P  + + S       +   +     RV W+V FYA+W     +  P+F  L+ +Y     RF  +D   + E+A+   +ST+  +KQ+PTL LF SGRE+ R P   +  R V     E  + + F L++ F  AS   +GRG+N
Sbjct:   45 RKVEILMFLSAIVMMKNRRAITLEQHAGNLFMFSKVANVILFFRLDIRLGIFYFALCIAFVMTCKPPLYMGPEYIKYFSEKTIDEELNHDT-----RVTWIVEFYANWSPQCQSFAPVFAXLSLKYNCAGLRFGKIDAGRYGEVAQRYKVSTSPLAKQLPTLVLFQSGREVMRRPMVDNKCRAVSWTFSEENIIREFNLNELFE-ASKKIKGRGEN 254          
BLAST of mRNA_L-elsbetiae_contig9304.18305.1 vs. uniprot
Match: A0A4W5L1F1_9TELE (Thioredoxin-related transmembrane protein 2a n=21 Tax=Salmonidae TaxID=8015 RepID=A0A4W5L1F1_9TELE)

HSP 1 Score: 97.1 bits (240), Expect = 7.600e-20
Identity = 58/214 (27.10%), Postives = 102/214 (47.66%), Query Frame = 0
Query:   41 QETEVLGLAAATLLSKYRKMATFDELIDRLFFLGKAAVAVLLFFIGVPHMVSYLIIWTACSLVVPYPRFLFPPEVAFLSPGEFQSMVRSPSQAPGQRVAWLVMFYADWCSASHNLKPMFGALARRYADKNRRFAVVDVLAHPEIAEDLNISTAGTSKQIPTLALFASGREICRLPTFASDGRVVRARMDEGGVTKYFELDKEFRTASYSRRGRG 254
            +E E+L   +A ++ K R+  T ++    LF   K A  +L F + +   + Y ++  A  +    P ++ P  + + S       +   +     RV W+V FYA+W     +  P+F  L+ +Y     RF  +D   + E+A+   +ST+  +KQ+P+L LF SGRE+ R P      R V     E  + + F L++ F  +   ++GRG
Sbjct:  107 REVEILMFLSAIVMMKNRRAITIEQHAGNLFMFSKVANVILFFRLDIRLGILYFLLCIAFVMTCKPPLYMGPEYIKYFSEKTIDEELNHDT-----RVTWIVEFYANWAPECQSFAPVFADLSLKYNCTGLRFGKIDAGRYGEVAQRYKVSTSPLAKQLPSLVLFQSGREVMRRPMVDIKFRAVSWTFSEENIIREFNLNELFEASKKIKKGRG 315          
BLAST of mRNA_L-elsbetiae_contig9304.18305.1 vs. uniprot
Match: UPI001AAD9EB8 (thioredoxin-related transmembrane protein 2 n=2 Tax=Ranoidea TaxID=30352 RepID=UPI001AAD9EB8)

HSP 1 Score: 95.5 bits (236), Expect = 1.320e-19
Identity = 54/206 (26.21%), Postives = 103/206 (50.00%), Query Frame = 0
Query:   41 QETEVLGLAAATLLSKYRKMATFDELIDRLFFLGKAAVAVLLFFIGVPHMVSYLIIWTACSLVVPYPRFLFPPEVAFLSPGEFQSMVRSPSQAPGQRVAWLVMFYADWCSASHNLKPMFGALARRYADKNRRFAVVDVLAHPEIAEDLNISTAGTSKQIPTLALFASGREICRLPTFASDGRVVRARMDEGGVTKYFELDKEFRTA 246
            +E E+L   +A ++ K R+  T ++ +  +F   K A  +L F + +   + Y+ +     +    P ++ P  + + +    +  ++S      +RV WLV F+A+W S   +  P++  L+ +Y     +F  VD+  +P+++    +ST+  SKQ+PTL LF SG+E+ R P     GR V        V + F L++ ++ A
Sbjct:   64 REVEILMFLSAIVMMKNRRSITIEQHVGNIFMFSKVANTILFFRLDLRMGLLYVTLCLVFLMTCKPPLYMGPEHIKYFNDKTMEEEMQSD-----RRVTWLVEFFANWSSECQSFAPIYAELSLKYNCAGLKFGKVDIGRYPDVSTKYGVSTSPLSKQLPTLILFQSGKEVLRRPQVDKKGRAVSWSFTPENVIREFNLNELYQKA 264          
BLAST of mRNA_L-elsbetiae_contig9304.18305.1 vs. uniprot
Match: A0A6I9XCY0_9HYME (thioredoxin-related transmembrane protein 2 homolog n=2 Tax=Formicidae TaxID=36668 RepID=A0A6I9XCY0_9HYME)

HSP 1 Score: 94.0 bits (232), Expect = 3.180e-19
Identity = 71/242 (29.34%), Postives = 115/242 (47.52%), Query Frame = 0
Query:    4 VHAHYVVNASMMLSYAVLRYF-MSSPHLTTKETWTGFSQETEVLGLAAATLLSKYRKMA--TFDELIDRLFFLGKAAVAVLLFFIGVPHMVSYLIIWTACSLVVPYPRFLFPPEVAFL--SPGEFQSMVRSPSQAPGQRVAWLVMFYADWCSASHNLKPMFGALARRYADKNRRFAVVDVLAHPEIAEDLNISTAGTSKQIPTLALFASGREICRLPTFASDGRVVRARMDEGGVTKYFELD 240
            V  +Y++N  + +SY + + F +   ++  ++      +ETE+L      ++ + RK    T    +   F   K A  +L F+  V   + +  I+  C+L++P P +  P  V +L  + G  + + R        RV WLV FY  W  A     P+F  L+  Y  +N +F  VD+  +P+ A+   IS A TSKQ+PTL LF SGREI R P     G+ V+       V    +L+
Sbjct:   11 VKPYYLINILLSISYILSKRFPVICNYIFVQDDCELDGRETEILFFLMIVIMMRTRKTGSVTMINYLTSSFVYTKVANLILWFYADVRMGILFAFIFILCALILPEPTYQGPENVIYLHGADGLQEELQRDT------RVVWLVAFYTAWNPACVTFAPIFSELSVEYTLENFKFGKVDIGRYPDAAKRHRISDASTSKQLPTLILFKSGREIERRPYMDHKGKFVKFLFSLDNVKAALDLN 246          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9304.18305.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
D7FYM6_ECTSI3.980e-14378.91Thioredoxin-like protein n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JZG0_9PHAE2.190e-4665.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6V1S3B1_HETAK7.540e-4437.15Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6S8C4H8_9STRA1.540e-2831.60Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A1X6P1N4_PORUM3.590e-2127.64Thioredoxin domain-containing protein n=1 Tax=Porp... [more]
A0A6Q2YXK4_ESOLU1.120e-2027.70Thioredoxin domain-containing protein n=3 Tax=Esox... [more]
UPI0015FAFC085.320e-2028.24thioredoxin-related transmembrane protein 2-like i... [more]
A0A4W5L1F1_9TELE7.600e-2027.10Thioredoxin-related transmembrane protein 2a n=21 ... [more]
UPI001AAD9EB81.320e-1926.21thioredoxin-related transmembrane protein 2 n=2 Ta... [more]
A0A6I9XCY0_9HYME3.180e-1929.34thioredoxin-related transmembrane protein 2 homolo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 118..211
e-value: 2.1E-10
score: 40.5
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 118..248
score: 10.199
NoneNo IPR availableGENE3D3.40.30.10coord: 117..243
e-value: 4.3E-21
score: 77.1
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 91..111
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 86..90
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 26..65
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 112..256
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..25
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 66..85
NoneNo IPR availableTMHMMTMhelixcoord: 7..26
NoneNo IPR availableTMHMMTMhelixcoord: 76..98
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 109..218

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9304contigL-elsbetiae_contig9304:1787..5832 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9304.18305.1mRNA_L-elsbetiae_contig9304.18305.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9304 1777..5832 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9304.18305.1 ID=prot_L-elsbetiae_contig9304.18305.1|Name=mRNA_L-elsbetiae_contig9304.18305.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=257bp
MRFVHAHYVVNASMMLSYAVLRYFMSSPHLTTKETWTGFSQETEVLGLAA
ATLLSKYRKMATFDELIDRLFFLGKAAVAVLLFFIGVPHMVSYLIIWTAC
SLVVPYPRFLFPPEVAFLSPGEFQSMVRSPSQAPGQRVAWLVMFYADWCS
ASHNLKPMFGALARRYADKNRRFAVVDVLAHPEIAEDLNISTAGTSKQIP
TLALFASGREICRLPTFASDGRVVRARMDEGGVTKYFELDKEFRTASYSR
RGRGKN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR036249Thioredoxin-like_sf