mRNA_L-elsbetiae_contig6224.14818.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6224.14818.1
Unique NamemRNA_L-elsbetiae_contig6224.14818.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig6224.14818.1 vs. uniprot
Match: A0A6H5K3P5_9PHAE (PUM-HD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3P5_9PHAE)

HSP 1 Score: 382 bits (982), Expect = 1.070e-128
Identity = 199/256 (77.73%), Postives = 212/256 (82.81%), Query Frame = 1
Query:   16 LLQLKLDQGDPSFVAKICGEAQPYLGEMMKDPFGNYLFQKIVDNVDEAARTDLVTQVAGEMVDAGMNLHGTRSVQKVIEVCRGTPSQVALVVAALRDATVPLCLDTNGNHVVQRLLQHLAPADNAFVFEMLAEACVAVATHRHGCCVLQRAIDAATVDQSRLLVSHVSQHALQLMQDPYGNYVVQYILGICSREEAETLVNVPIGKV------AMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQ 765
            LLQLKLDQGDP FV+KICGEAQPYL EMMKDPFGNYLFQKI D VDE  RTDLV QVAG+MV+AGMNLHGTRSVQK+IEVCRGTPSQVA+VV+AL+DATVPLCLDTNGNHVVQRLLQHLAP DNAF                          DAATV+QSRLLVS VS+HALQLMQDPYGNYVVQY+LGICS +EA  LVNVP+GKV      AMLSMQKFSSNVIEKCMDRASEE+IVKYVHELADPAAMRPLLQ
Sbjct:  184 LLQLKLDQGDPVFVSKICGEAQPYLSEMMKDPFGNYLFQKIADKVDEDGRTDLVNQVAGQMVEAGMNLHGTRSVQKIIEVCRGTPSQVAVVVSALKDATVPLCLDTNGNHVVQRLLQHLAPTDNAFXXXXXXXXXXXXXXXXXXXXXXXXXXDAATVEQSRLLVSQVSKHALQLMQDPYGNYVVQYVLGICSHDEAVALVNVPLGKVGNEKMVAMLSMQKFSSNVIEKCMDRASEEIIVKYVHELADPAAMRPLLQ 439          
BLAST of mRNA_L-elsbetiae_contig6224.14818.1 vs. uniprot
Match: D8LGB5_ECTSI (PUM-HD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGB5_ECTSI)

HSP 1 Score: 247 bits (630), Expect = 5.290e-79
Identity = 119/134 (88.81%), Postives = 126/134 (94.03%), Query Frame = 1
Query:    1 QIGCRLLQLKLDQGDPSFVAKICGEAQPYLGEMMKDPFGNYLFQKIVDNVDEAARTDLVTQVAGEMVDAGMNLHGTRSVQKVIEVCRGTPSQVALVVAALRDATVPLCLDTNGNHVVQRLLQHLAPADNAFVFE 402
            QIGCRLLQLKLDQGDP FV+KICGEAQPYL EMMKDPFGNYLFQKI D VDE  RTDLV QVAG+MV+AGMNLHGTRSVQK+IEVCRGTPSQVA+VV+AL+DATVPLCLDTNGNHVVQRLLQHLAP DNAFVFE
Sbjct:   78 QIGCRLLQLKLDQGDPMFVSKICGEAQPYLSEMMKDPFGNYLFQKIADKVDEDGRTDLVNQVAGQMVEAGMNLHGTRSVQKIIEVCRGTPSQVAVVVSALKDATVPLCLDTNGNHVVQRLLQHLAPTDNAFVFE 211          
BLAST of mRNA_L-elsbetiae_contig6224.14818.1 vs. uniprot
Match: A0A1V9YPP5_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YPP5_9STRA)

HSP 1 Score: 249 bits (635), Expect = 1.910e-75
Identity = 134/257 (52.14%), Postives = 172/257 (66.93%), Query Frame = 1
Query:    1 QIGCRLLQLKLD-QGDPSFVAKICGEAQPYLGEMMKDPFGNYLFQKIVDNVDEAARTDLVTQVAGEMVDAGMNLHGTRSVQKVIEVCRGTPSQVALVVAALRDATVPLCLDTNGNHVVQRLLQHLAPAD-NAFVFEMLAEACVAVATHRHGCCVLQRAIDAATVDQSRLLVSHVSQHALQLMQDPYGNYVVQYILGICSREEAETLVNVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQ 765
            Q GCRLLQ +LD  G P     I  EA P+L +MM DPFGNYLFQK+++ V +  R ++V +V+  +V A +NLHGTRSVQKV+EVC    +   ++V ALR   V LC+D+NGNHV+QR LQ L PAD N FVF+ +A  C  V THRHGCCVLQR +DAA   Q R ++S V  HA++LMQDPYGNYVVQY+L  C  +E   L+    G V  LS+QKFSSNV+EKC++ A  E+   +V E+     M  +LQ
Sbjct:  269 QNGCRLLQEQLDCVGRPDLCDVIYTEALPHLVDMMVDPFGNYLFQKLLERVADDQRLEIVKRVSPHLVAAALNLHGTRSVQKVVEVCATDRTLATIIVKALRGDAVRLCIDSNGNHVIQRALQFL-PADFNQFVFDAVATDCTVVGTHRHGCCVLQRCVDAANEAQKRAVISQVELHAMKLMQDPYGNYVVQYVLDACPNDETVGLMAKCAGHVYELSVQKFSSNVVEKCLELAPYELRQAFVREIIASPRMHRMLQ 524          
BLAST of mRNA_L-elsbetiae_contig6224.14818.1 vs. uniprot
Match: A0A833SFT8_PHYIN (Pumilio-family RNA binding repeat domain-containing protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SFT8_PHYIN)

HSP 1 Score: 244 bits (623), Expect = 2.290e-74
Identity = 131/287 (45.64%), Postives = 176/287 (61.32%), Query Frame = 1
Query:    1 QIGCRLLQLKLDQGDPSFVAKIC-GEAQPYLGEMMKDPFGNYLFQKIVDNVDEAARTDLVTQVAGEMVDAGMNLHGTRSVQKVIEVC-------------------------------RGTPSQVALVVAALRDATVPLCLDTNGNHVVQRLLQHLAPADNAFVFEMLAEACVAVATHRHGCCVLQRAIDAATVDQSRLLVSHVSQHALQLMQDPYGNYVVQYILGICSREEAETLVNVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQ 765
            Q GCRLLQ +LD  D   +  +   E+  +L EMM DPFGNYLFQK+++ V E  R  ++ +V+  +V A +NLHGTRSVQKV+EVC                               R T S   L+V AL+D  V LC+D+NGNHV+QR LQ + P  N FVF+ + + C  V THRHGCCVLQR +DAA   Q   +++ V + A++LMQDPYGNYVVQY+L  C+ EEA  ++  P+G +  LS+QKFSSNVIEKC+++A E +  KY+ E+     M  +LQ
Sbjct:   94 QNGCRLLQEQLDYEDRGDLCDVIYQESLEHLAEMMVDPFGNYLFQKLLERVKEKQRLVIIRRVSSNLVAAALNLHGTRSVQKVVEVCATSSSVIEEDFDEEEEGEEYGYEERPEGGKGRRTTSLPDLIVEALKDDAVRLCIDSNGNHVIQRALQFMKPEYNQFVFDAVCKECTTVGTHRHGCCVLQRCLDAANKTQKAEVIAQVERQAMKLMQDPYGNYVVQYVLDSCTAEEAFGVIMKPLGHIYELSVQKFSSNVIEKCLEKAPERVRQKYIAEITSCPKMNKMLQ 380          
BLAST of mRNA_L-elsbetiae_contig6224.14818.1 vs. uniprot
Match: A0A024GRC2_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GRC2_9STRA)

HSP 1 Score: 251 bits (642), Expect = 3.490e-74
Identity = 132/266 (49.62%), Postives = 176/266 (66.17%), Query Frame = 1
Query:    1 QIGCRLLQLKLDQGDPSFVAKIC-GEAQPYLGEMMKDPFGNYLFQKIVDNVDEAARTDLVTQVAGEMVDAGMNLHGTRSVQKVIEVCRGTPSQVA----------LVVAALRDATVPLCLDTNGNHVVQRLLQHLAPADNAFVFEMLAEACVAVATHRHGCCVLQRAIDAATVDQSRLLVSHVSQHALQLMQDPYGNYVVQYILGICSREEAETLVNVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQ 765
            Q GCRLLQ +L+  D   + +I   E+  +L EMM DPFGNYLFQK++   DE  R  +V  V   ++ A +NLHGTRSVQKV+E+C  T S+ +          LVV AL+D  V LC+D+NGNHV+QR LQ+       F+F+ ++  C  V THRHGCCVLQR +DAA   Q + L++ V  HA++LMQDPYGNYVVQY+L  C+ EEA  ++  P+G V  LS+QKFSSNV+EKC+++A E +  +YV EL   A M+ LLQ
Sbjct:  551 QNGCRLLQEQLEYDDRKVLWQIIFQESLDHLPEMMVDPFGNYLFQKLIARADEWQRLAIVRAVCPHLMAAALNLHGTRSVQKVVEICANTKSEHSNEENGMDLSELVVEALKDDAVRLCIDSNGNHVIQRALQYFQSKSTQFIFDAVSRECTTVGTHRHGCCVLQRCLDAANTLQKKELIAQVENHAMKLMQDPYGNYVVQYVLDACTAEEAIGIMIKPLGHVFELSVQKFSSNVVEKCLEKAPERIRRRYVEELIGCAKMQRLLQ 816          
BLAST of mRNA_L-elsbetiae_contig6224.14818.1 vs. uniprot
Match: F0WL38_9STRA (Uncharacterized protein AlNc14C140G7225 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WL38_9STRA)

HSP 1 Score: 250 bits (639), Expect = 7.970e-74
Identity = 132/265 (49.81%), Postives = 177/265 (66.79%), Query Frame = 1
Query:    1 QIGCRLLQLKLDQGDPSFVAKIC-GEAQPYLGEMMKDPFGNYLFQKIVDNVDEAARTDLVTQVAGEMVDAGMNLHGTRSVQKVIEVCRGTPSQVA---------LVVAALRDATVPLCLDTNGNHVVQRLLQHLAPADNAFVFEMLAEACVAVATHRHGCCVLQRAIDAATVDQSRLLVSHVSQHALQLMQDPYGNYVVQYILGICSREEAETLVNVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQ 765
            Q GCRLLQ +L+  D   + +I   E+  +L EMM DPFGNYLFQK++   DE  R  +V  V   ++ A +NLHGTRSVQKV+E+C  + S+           L+V AL+D  V LC+D+NGNHV+QR LQ+  P    F+F+ ++  C  V THRHGCCVLQR +DAA V Q + L++ V  HA++LMQDPYGNYVVQY+L  C+ EEA  ++  P+G V  LS+QKFSSNV+EKC+++A E +  +YV EL   A M+ LLQ
Sbjct:  539 QNGCRLLQEQLEYDDRKTLWQIIFQESLHHLPEMMVDPFGNYLFQKLIARADEWQRLAIVRAVCPHLMAAALNLHGTRSVQKVVEICAISQSEKKDATSIDLPQLIVHALKDDAVRLCIDSNGNHVIQRALQYFNPKFTQFIFDAVSRECTTVGTHRHGCCVLQRCLDAANVTQKKELIAQVEYHAMKLMQDPYGNYVVQYVLDACTAEEAIGIMMKPLGHVFELSIQKFSSNVVEKCLEKAPERIRRRYVEELIVCAKMQRLLQ 803          
BLAST of mRNA_L-elsbetiae_contig6224.14818.1 vs. uniprot
Match: A0A8K1C9G3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C9G3_PYTOL)

HSP 1 Score: 249 bits (637), Expect = 3.930e-73
Identity = 129/272 (47.43%), Postives = 177/272 (65.07%), Query Frame = 1
Query:    1 QIGCRLLQLKLD--QGDPSFVAKICGEAQPYLGEMMKDPFGNYLFQKIVDNVDEAARTDLVTQVAGEMVDAGMNLHGTRSVQKVIEVCRGTPSQVAL---------------VVAALRDATVPLCLDTNGNHVVQRLLQHLAPADNAFVFEMLAEACVAVATHRHGCCVLQRAIDAATVDQSRLLVSHVSQHALQLMQDPYGNYVVQYILGICSREEAETLVNVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQ 765
            Q GCRLLQ +LD  +        I GE+  +L EMM DPFGNYLFQK+++      R +++ +V+G +V A +NLHGTRSVQKV+EVC  +   V L               +V AL+D  V LC+D+NGNHV+QR LQ + P  N FVF+ + + C  V THRHGCCVLQR +DAA   Q R +++ V + A++LMQDPYGNYVVQY+L  C+ EEA  ++  P+G V  LS+QKFSSNVIEKC+++A   ++ +Y+ E+     M+ +LQ
Sbjct:  576 QNGCRLLQEQLDFYEERKELCDVIYGESVEHLAEMMVDPFGNYLFQKLLERAKPLQRLEIIRRVSGNLVAAALNLHGTRSVQKVVEVCATSAEVVELDSDGNELRRVNLPDLIVEALKDDAVRLCIDSNGNHVIQRALQFMKPEYNQFVFDAVCKECTTVGTHRHGCCVLQRCLDAANDTQKREVITQVEKQAMKLMQDPYGNYVVQYVLDSCTAEEAYGVIVKPLGNVFELSIQKFSSNVIEKCLEKAPPVVLTQYIDEITTCPKMQKMLQ 847          
BLAST of mRNA_L-elsbetiae_contig6224.14818.1 vs. uniprot
Match: A0A662WKH4_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WKH4_9STRA)

HSP 1 Score: 244 bits (623), Expect = 2.540e-72
Identity = 129/290 (44.48%), Postives = 178/290 (61.38%), Query Frame = 1
Query:    1 QIGCRLLQLKLDQGDPSFVAKIC-GEAQPYLGEMMKDPFGNYLFQKIVDNVDEAARTDLVTQVAGEMVDAGMNLHGTRSVQKVIEVCRGTPSQVA----------------------------------LVVAALRDATVPLCLDTNGNHVVQRLLQHLAPADNAFVFEMLAEACVAVATHRHGCCVLQRAIDAATVDQSRLLVSHVSQHALQLMQDPYGNYVVQYILGICSREEAETLVNVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQ 765
            Q GCRLLQ +LD  D + + ++   E+  +L EMM DPFGNYLFQK+++ V+E  R  ++ +V+  +V A +NLHGTRSVQKV+EVC  +P  +                                   L+V AL+D  V LC+D+NGNHV+QR LQ + P  N FVF+ + + C  V THRHGCCVLQR +DAA   Q   ++  V + A++LMQDPYGNYVVQY+L  C+ EEA  ++  P+G +  LS+QKFSSNVIEKC+++A E +  KY+ E+     M  +LQ
Sbjct:  319 QNGCRLLQEQLDYEDRADLCEVIYQESLEHLAEMMVDPFGNYLFQKLLERVNEKQRLVIIRRVSSNLVAAALNLHGTRSVQKVVEVCATSPDVIEEDYEDEDAEDYEYGKEREDRPEGGGQRRTTSLPDLIVEALKDDAVRLCIDSNGNHVIQRALQFMRPEYNQFVFDAVCKECTTVGTHRHGCCVLQRCLDAANKTQKAEVIEQVERQAMKLMQDPYGNYVVQYVLDSCTAEEAFGVILKPLGHIFELSVQKFSSNVIEKCLEKAPERVRQKYIAEITSCPKMNKMLQ 608          
BLAST of mRNA_L-elsbetiae_contig6224.14818.1 vs. uniprot
Match: V9FR80_PHYPR (Uncharacterized protein n=12 Tax=Phytophthora TaxID=4783 RepID=V9FR80_PHYPR)

HSP 1 Score: 246 bits (629), Expect = 6.830e-72
Identity = 129/286 (45.10%), Postives = 179/286 (62.59%), Query Frame = 1
Query:    1 QIGCRLLQLKLDQGDPSFVAKIC-GEAQPYLGEMMKDPFGNYLFQKIVDNVDEAARTDLVTQVAGEMVDAGMNLHGTRSVQKVIEVCRGTPSQVA------------------------------LVVAALRDATVPLCLDTNGNHVVQRLLQHLAPADNAFVFEMLAEACVAVATHRHGCCVLQRAIDAATVDQSRLLVSHVSQHALQLMQDPYGNYVVQYILGICSREEAETLVNVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQ 765
            Q GCRLLQ +LD  D + + ++   E+  +L EMM DPFGNYLFQK+++ V+E  R  ++ +V+  +V A +NLHGTRSVQKV+EVC  +P  +                               L+V AL+D  V LC+D+NGNHV+QR LQ + P  N FVF+ + + C  V THRHGCCVLQR +DAA   Q   ++  V + A++LMQDPYGNYVVQY+L  C+ EEA  ++  P+G +  LS+QKFSSNVIEKC+++A E +  KY+ E+ +   M  +LQ
Sbjct:  564 QNGCRLLQEQLDYEDRADLCEVIYQESLEHLAEMMVDPFGNYLFQKLLERVNEKQRLVIIRRVSSNLVAAALNLHGTRSVQKVVEVCATSPDVIEEDYEDEEGEDYGYVREERPEGGRRTTSLPDLIVEALKDDAVRLCIDSNGNHVIQRALQFMKPEYNQFVFDAVCKECTTVGTHRHGCCVLQRCLDAANKTQKAEVIEQVERQAMKLMQDPYGNYVVQYVLDSCTAEEAFGVIMKPLGHIYELSVQKFSSNVIEKCLEKAPERVRQKYIAEITNCPKMNKMLQ 849          
BLAST of mRNA_L-elsbetiae_contig6224.14818.1 vs. uniprot
Match: A0A485KML4_9STRA (Aste57867_9189 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KML4_9STRA)

HSP 1 Score: 241 bits (616), Expect = 8.700e-72
Identity = 129/258 (50.00%), Postives = 174/258 (67.44%), Query Frame = 1
Query:    1 QIGCRLLQLKLDQGDPSFVAK-ICGEAQPYLGEMMKDPFGNYLFQKIVDNVDEAARTDLVTQVAGEMVDAGMNLHGTRSVQKVIEVCRGT--PSQVALVVAALRDATVPLCLDTNGNHVVQRLLQHLAPADNAFVFEMLAEACVAVATHRHGCCVLQRAIDAATVDQSRLLVSHVSQHALQLMQDPYGNYVVQYILGICSREEAETLVNVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQ 765
            Q GCRLLQ +LD  D S +   I  E+ P+L +MM DPFGNYLFQK+++ V +A R  +V  VA  +V A +NLHGTRSVQKV+E+C  +  P+ V L+V AL++  V LC+D+NGNHV+QR LQ++    N FVF+ +   C  V THRHGCCVLQR +DAA V Q   +++ V  HA++LMQDPYGNYVVQY+L  CS  +A  ++   +  V  LS+QKFSSNVIEKC++ A + +   +V E+     M  +LQ
Sbjct:  351 QNGCRLLQEQLDFVDRSDLCDLIYTESLPHLVDMMVDPFGNYLFQKLLERVTDAQRLVVVQHVAFHLVAAALNLHGTRSVQKVVEICASSSQPALVQLIVDALKEDAVRLCIDSNGNHVIQRALQYMPSEYNQFVFDAVCAECTVVGTHRHGCCVLQRCVDAANVVQKAEVIAQVEAHAMKLMQDPYGNYVVQYVLDACSAADALGVMQKCVTHVFELSIQKFSSNVIEKCLELAPDGLRQTFVREIIACPRMYRMLQ 608          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6224.14818.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K3P5_9PHAE1.070e-12877.73PUM-HD domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LGB5_ECTSI5.290e-7988.81PUM-HD domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A1V9YPP5_9STRA1.910e-7552.14Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A833SFT8_PHYIN2.290e-7445.64Pumilio-family RNA binding repeat domain-containin... [more]
A0A024GRC2_9STRA3.490e-7449.62Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
F0WL38_9STRA7.970e-7449.81Uncharacterized protein AlNc14C140G7225 n=1 Tax=Al... [more]
A0A8K1C9G3_PYTOL3.930e-7347.43Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A662WKH4_9STRA2.540e-7244.48Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
V9FR80_PHYPR6.830e-7245.10Uncharacterized protein n=12 Tax=Phytophthora TaxI... [more]
A0A485KML4_9STRA8.700e-7250.00Aste57867_9189 protein n=1 Tax=Aphanomyces stellat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6224contigL-elsbetiae_contig6224:7385..11339 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score250.4
Seed ortholog evalue9.2e-64
Seed eggNOG ortholog653948.CCA21998
Hectar predicted targeting categoryother localisation
EggNOG free text desc.regulation of translation
EggNOG OGsCOG5099@1,KOG2049@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionPumilio RNA-binding protein
Ec32 orthologEc-06_002700.1
Exons5
Model size765
Cds size765
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6224.14818.1prot_L-elsbetiae_contig6224.14818.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6224 7385..11339 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816683.852227-CDS-L-elsbetiae_contig6224:7384..75671622816683.852227-CDS-L-elsbetiae_contig6224:7384..7567Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6224 7385..7567 +
1691683737.9525542-CDS-L-elsbetiae_contig6224:7384..75671691683737.9525542-CDS-L-elsbetiae_contig6224:7384..7567Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6224 7385..7567 +
1622816683.8636098-CDS-L-elsbetiae_contig6224:8244..84631622816683.8636098-CDS-L-elsbetiae_contig6224:8244..8463Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6224 8245..8463 +
1691683737.965808-CDS-L-elsbetiae_contig6224:8244..84631691683737.965808-CDS-L-elsbetiae_contig6224:8244..8463Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6224 8245..8463 +
1622816683.8744361-CDS-L-elsbetiae_contig6224:9360..95011622816683.8744361-CDS-L-elsbetiae_contig6224:9360..9501Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6224 9361..9501 +
1691683737.9764764-CDS-L-elsbetiae_contig6224:9360..95011691683737.9764764-CDS-L-elsbetiae_contig6224:9360..9501Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6224 9361..9501 +
1622816683.8856459-CDS-L-elsbetiae_contig6224:9875..99651622816683.8856459-CDS-L-elsbetiae_contig6224:9875..9965Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6224 9876..9965 +
1691683737.9890091-CDS-L-elsbetiae_contig6224:9875..99651691683737.9890091-CDS-L-elsbetiae_contig6224:9875..9965Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6224 9876..9965 +
1622816683.8966274-CDS-L-elsbetiae_contig6224:11207..113391622816683.8966274-CDS-L-elsbetiae_contig6224:11207..11339Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6224 11208..11339 +
1691683737.9979317-CDS-L-elsbetiae_contig6224:11207..113391691683737.9979317-CDS-L-elsbetiae_contig6224:11207..11339Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6224 11208..11339 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6224.14818.1

>prot_L-elsbetiae_contig6224.14818.1 ID=prot_L-elsbetiae_contig6224.14818.1|Name=mRNA_L-elsbetiae_contig6224.14818.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=255bp
QIGCRLLQLKLDQGDPSFVAKICGEAQPYLGEMMKDPFGNYLFQKIVDNV
DEAARTDLVTQVAGEMVDAGMNLHGTRSVQKVIEVCRGTPSQVALVVAAL
RDATVPLCLDTNGNHVVQRLLQHLAPADNAFVFEMLAEACVAVATHRHGC
CVLQRAIDAATVDQSRLLVSHVSQHALQLMQDPYGNYVVQYILGICSREE
AETLVNVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAM
RPLLQ
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mRNA from alignment at L-elsbetiae_contig6224:7385..11339+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6224.14818.1 ID=mRNA_L-elsbetiae_contig6224.14818.1|Name=mRNA_L-elsbetiae_contig6224.14818.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3955bp|location=Sequence derived from alignment at L-elsbetiae_contig6224:7385..11339+ (Laminarionema elsbetiae ELsaHSoW15)
CAGATCGGCTGCAGGCTGCTCCAGCTCAAGCTCGACCAGGGGGACCCGTC GTTCGTGGCCAAGATCTGCGGCGAGGCCCAGCCCTACCTGGGCGAGATGA TGAAGGACCCCTTCGGCAACTACCTGTTCCAGAAGATAGTGGACAACGTC GACGAGGCGGCCCGGACCGACCTCGTCACGCAGGTGCGTGCGCAGCAGCA GCAGCAGCAGCAGCGGTGATTTGGTGCTTGTTACCTTGGCGGCGCGTCGT GGGAAAAAAAAGTCTAAATAGCCTAGTCTAGTCTCGTCTTGTCGAGACTA ATCCAGACTAATCCAGAGTTTCAGTATGCGGGTATCAACTTGGTGGTACT GGAGAGACGGCAAAAATGGAGGGTCACAAGAGGGCAAAAAATACTCGAAT GTGCTGAAGCTGTGCGGGAGGGTGTTTTGTTTTTTGCGGGGGAAGAGGGG TGGGGTCCTTGGTTTCTCTGCTCGACTGATATTTTATTGATGTAGATGAA GACATGGCAGCTGTCTGATCTGACGGATGGACGGTCCGTTTTCGTCACCT TGAGTATGTTCCACGGACCGAGCTTGCACTCGAAACCCGTGCTTACCGTC TCTCTCCTATCACAACCAAGCAAGAACCGTTACCACCGCCGCCGCCGCCA CCGCCGCCGCCCACGACGAGCAGCAAAACATGGGGAAATAAAAAGCCACC TCCGCTTAAAACTGTTCAGAAAAGATGCGCGCGTGGTATTTGTACTCCTA GTAAACAATACTTCTTCGCCGCCCCGTCCCCCCCTCCCAACGCCCGCTTG GAACGATTCTAATCCCGAACCCCTCCCACGACAAACGACGACCGCGGTTG ACGCCGCCAGGTTGCCGGTGAGATGGTGGACGCCGGGATGAACCTCCACG GCACGCGGTCGGTGCAGAAGGTGATCGAGGTCTGCCGGGGCACCCCGTCG CAGGTGGCGCTGGTGGTGGCCGCCCTCAGGGACGCCACGGTGCCCCTCTG CCTCGACACCAACGGCAACCATGTCGTGCAGCGGCTTCTGCAGCACCTGG CGCCGGCCGACAATGCCTTCGTGTTCGAGGTGAGTTTTGGTTTCTAACGT GCATGTGTCCTTAGCTTGCTGGGTTGTGTGTACCGCCGTAGGTGACACAG GATACCACACCCCCCCCCCTGTGGACAGATTTTCAAAGCTTGATTCCTCC CCAGCAAGAAGAGTGCCAGTGCCGAGAGAGGGGGTGGGTGGCGTTGAAAA TATCTAGTCGAGGGCTGTCCGAAAATGTGTCGCTTGGTGCTGGCACCCTA CGTGGTCTGTGTGGTTTTGGTCTCTGCTTGTTTTGCTTGTCTAGCAGATG TTGGCTGTCTCGAGAATGTTAATGGGTCGTGTTTAGTCATCGCACCCCCT GGTACCGATTTTCAGAGCTCGATTACGCTTTAGCGAAGGGGGGGATTCCG GGAATCGAAAAAAGGCGGCATTCGGACGATCACGTCGAGAGCTGTCGAGA GAAACGTGCCGTTTGGTGTTGGCACCCTCTTCAAGGAGTAATCGAGCCCT GAAAATCGGTACGATACAGGGAGGGGGGGGGCGACGACTCGCACGATAAC GGTGTACGCATGCAGGCCAGGGGCCGTTTGCAATCGTGTTTTGTAGGGTT GTTCTGAAAACAGCGGTTAGTATTGTCGTCCCTCCAAGAGCGATCGATAT CGATATCTACCGTTCTATTCATAATGCAGACCCTCGATTTAAAGTTACTT AACTACGAGTTCACCCGAGGCTCAAACTGACCACCGACCGCGCTCTCCCA TTGCTCACCAGTTCGCTTTTTTCATCTAGTTGCTGTCTGTGCATGACGAC TCTCTCTCTCTCTCTCTCTCTCTCGCTCTCTCTCTTTCTCGCTCTCTCTC TCCCCCCCTCTCTCTCTCCCTTCGCTTTGCTTTGCGGGGGGCACCATCAA ACGCCTGTTTCTTTTTATCTCGTCAGATGCTGGCCGAGGCCTGTGTCGCG GTGGCCACCCACCGGCACGGCTGCTGCGTGCTCCAGAGAGCGATCGACGC GGCCACGGTGGACCAGTCGAGGCTGCTCGTCTCCCATGTCTCGCAGCACG CCCTGCAGCTCATGCAGGTAAATAGGTCCACGGTGGTGGCGTTGATTTGG GCCCGGCCCTGTTGATTGATTCGAGATGTCTCGCGTGTTGGTTTGGTGTT GTCGCCGCCGTTGTCGTCGTCTCGTCTCGTCTCGTCTCGTTGTCGTTGCA GTGACATCACGAAACCGTCACGTGCGCAGCAGGCAGTACCCCTACTCAAT CGTGTAATACTTGTTGTTGTTGTTGTTTCTTCACTCTCGTGTTATCCTTC GTTTGAGCCCGGCCACGAAGGGGGATCGGAAGAAGTGCGTGTTTTTTGCG CCTCGTTTTGATCGAAAAAGTTTTTTTTGTTCCCCTCTTCTTGTTAATCG CTTCGGCGGTCGATCGTTGTCTCCTCTTGCGGGGTTTGCAGGACCCGTAC GGCAACTACGTTGTGCAGTACATCCTGGGCATCTGCTCTCGCGAGGAAGC CGAGACGCTCGTCAACGTGCCAATCGGAAAGGTGCGGATGAAAATAAGGA GTTAGCGCTGACTGATCTCAGGCCTATGCAAATACCAAGTACTAGTTTGC GAATAATTAGCCGCACATCCAACCCAACCCACCCCACCCAACCACCCACG GCGCCAACCCAACCCAACCCAACCCAACCCAACCACCCGCGGACCCACGG CGCCAACCCAACACAACCCAACACACCCACCCGCGGACCCACGGCGCCAA TGCAAATACGAAGTGCAATTAGGGGCCCGGTAAATCTCGTTGGACCCGAT ACGGGGAGAGCGAGAATCACATATAAAACCCTCAAATACTTGAAAACCTG GCGCTTCAGGCATTCGGTCGTCTTCCCACCCAAGTTATTTGTGAGATAGC ACATTCAGACTGCGATGAAGCGATCGCGCTTGCCCGCGCGGTGGACCAGT TTTCATTATTCCTTTTGATGAGACAATGCGAGTGGTACGAGATGCCAGCA GCGTAAGTATAGAAGACAAGAACACTCTCAAGTTCAAAGCTTTCGAGAGA TGTGGTGCGCATAAGTCTTTCACCGTTACCGATATCGATCGATGCAGCCG TGTGATTTCCGTCGTCGAAACAGCAGCATTATTTTTGCTGCACAGTTTTG AAGGATGTCAGGCAGCCCTGGAAGGCTAAGTTATCCCGCTACGCGAGGAG AGAGGTTTTTCCTCCAGCGTTCTCCAGCCTCTCTGCCACAGGTCAAAACA TGTATTCCGGGGAGAAACAACCTTTATTCAGACAGTAGTCTACGCGGGGT TTTTGTCTTATGCTAACATATGGGATAAAGTATGGAAACCGTTTGGGGGG GTCGGTGGGGTTAGTTAGAGTTAGTAGGTAGTATAAAATTAATTTCTGCG TAGGCGGCCCTATTCAGAGCGCCGACCGGGCTATGTCGTATTTTGTGACG GGTGTGTCCAAACCGCCGAGTGCTGTGTGTTAATTGTTGTTTCTCACATT AGCTCTCTAGTCCAAAACATCCTTGGGGGGCCCGTGGTCACAAAGCAAGG CACACTCGACGCCGCCGAAGAAACACTAAAAACAAAACGAAAAATAGTCT ATGGTACGTTCGCGCCCGGCGGTAGGTAGGTACTAAACTGAACCCCGAGG GGTCTCGCGTCTTGCCAACCGGTGCAAAATCAAGTGTGTGACCGCGGGAC CGCGGGGAGCTTGCCTACTGTTTACTTCTATTTATTGCTGGTTCCTCCTC CTCCTCCTCCTCCTCCTTCGCAGGTAGCGATGCTCTCCATGCAGAAATTC TCGTCCAACGTGATCGAGAAGTGCATGGACCGGGCGTCCGAGGAGATGAT CGTCAAGTACGTGCACGAGCTCGCCGACCCCGCCGCTATGCGGCCCCTTC TCCAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig6224:7385..11339+

>mRNA_L-elsbetiae_contig6224.14818.1 ID=mRNA_L-elsbetiae_contig6224.14818.1|Name=mRNA_L-elsbetiae_contig6224.14818.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1530bp|location=Sequence derived from alignment at L-elsbetiae_contig6224:7385..11339+ (Laminarionema elsbetiae ELsaHSoW15)
CAGATCGGCTGCAGGCTGCTCCAGCTCAAGCTCGACCAGGGGGACCCGTC
GTTCGTGGCCAAGATCTGCGGCGAGGCCCAGCCCTACCTGGGCGAGATGA
TGAAGGACCCCTTCGGCAACTACCTGTTCCAGAAGATAGTGGACAACGTC
GACGAGGCGGCCCGGACCGACCTCGTCACGCAGCAGATCGGCTGCAGGCT
GCTCCAGCTCAAGCTCGACCAGGGGGACCCGTCGTTCGTGGCCAAGATCT
GCGGCGAGGCCCAGCCCTACCTGGGCGAGATGATGAAGGACCCCTTCGGC
AACTACCTGTTCCAGAAGATAGTGGACAACGTCGACGAGGCGGCCCGGAC
CGACCTCGTCACGCAGGTTGCCGGTGAGATGGTGGACGCCGGGATGAACC
TCCACGGCACGCGGTCGGTGCAGAAGGTGATCGAGGTCTGCCGGGGCACC
CCGTCGCAGGTGGCGCTGGTGGTGGCCGCCCTCAGGGACGCCACGGTGCC
CCTCTGCCTCGACACCAACGGCAACCATGTCGTGCAGCGGCTTCTGCAGC
ACCTGGCGCCGGCCGACAATGCCTTCGTGTTCGAGGTTGCCGGTGAGATG
GTGGACGCCGGGATGAACCTCCACGGCACGCGGTCGGTGCAGAAGGTGAT
CGAGGTCTGCCGGGGCACCCCGTCGCAGGTGGCGCTGGTGGTGGCCGCCC
TCAGGGACGCCACGGTGCCCCTCTGCCTCGACACCAACGGCAACCATGTC
GTGCAGCGGCTTCTGCAGCACCTGGCGCCGGCCGACAATGCCTTCGTGTT
CGAGATGCTGGCCGAGGCCTGTGTCGCGGTGGCCACCCACCGGCACGGCT
GCTGCGTGCTCCAGAGAGCGATCGACGCGGCCACGGTGGACCAGTCGAGG
CTGCTCGTCTCCCATGTCTCGCAGCACGCCCTGCAGCTCATGCAGATGCT
GGCCGAGGCCTGTGTCGCGGTGGCCACCCACCGGCACGGCTGCTGCGTGC
TCCAGAGAGCGATCGACGCGGCCACGGTGGACCAGTCGAGGCTGCTCGTC
TCCCATGTCTCGCAGCACGCCCTGCAGCTCATGCAGGACCCGTACGGCAA
CTACGTTGTGCAGTACATCCTGGGCATCTGCTCTCGCGAGGAAGCCGAGA
CGCTCGTCAACGTGCCAATCGGAAAGGACCCGTACGGCAACTACGTTGTG
CAGTACATCCTGGGCATCTGCTCTCGCGAGGAAGCCGAGACGCTCGTCAA
CGTGCCAATCGGAAAGGTAGCGATGCTCTCCATGCAGAAATTCTCGTCCA
ACGTGATCGAGAAGTGCATGGACCGGGCGTCCGAGGAGATGATCGTCAAG
TACGTGCACGAGCTCGCCGACCCCGCCGCTATGCGGCCCCTTCTCCAGGT
AGCGATGCTCTCCATGCAGAAATTCTCGTCCAACGTGATCGAGAAGTGCA
TGGACCGGGCGTCCGAGGAGATGATCGTCAAGTACGTGCACGAGCTCGCC
GACCCCGCCGCTATGCGGCCCCTTCTCCAG
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