prot_L-elsbetiae_contig6224.14818.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6224.14818.1
Unique Nameprot_L-elsbetiae_contig6224.14818.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length255
Homology
BLAST of mRNA_L-elsbetiae_contig6224.14818.1 vs. uniprot
Match: A0A6H5K3P5_9PHAE (PUM-HD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3P5_9PHAE)

HSP 1 Score: 382 bits (982), Expect = 1.070e-128
Identity = 199/256 (77.73%), Postives = 212/256 (82.81%), Query Frame = 0
Query:    6 LLQLKLDQGDPSFVAKICGEAQPYLGEMMKDPFGNYLFQKIVDNVDEAARTDLVTQVAGEMVDAGMNLHGTRSVQKVIEVCRGTPSQVALVVAALRDATVPLCLDTNGNHVVQRLLQHLAPADNAFVFEMLAEACVAVATHRHGCCVLQRAIDAATVDQSRLLVSHVSQHALQLMQDPYGNYVVQYILGICSREEAETLVNVPIGKV------AMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQ 255
            LLQLKLDQGDP FV+KICGEAQPYL EMMKDPFGNYLFQKI D VDE  RTDLV QVAG+MV+AGMNLHGTRSVQK+IEVCRGTPSQVA+VV+AL+DATVPLCLDTNGNHVVQRLLQHLAP DNAF                          DAATV+QSRLLVS VS+HALQLMQDPYGNYVVQY+LGICS +EA  LVNVP+GKV      AMLSMQKFSSNVIEKCMDRASEE+IVKYVHELADPAAMRPLLQ
Sbjct:  184 LLQLKLDQGDPVFVSKICGEAQPYLSEMMKDPFGNYLFQKIADKVDEDGRTDLVNQVAGQMVEAGMNLHGTRSVQKIIEVCRGTPSQVAVVVSALKDATVPLCLDTNGNHVVQRLLQHLAPTDNAFXXXXXXXXXXXXXXXXXXXXXXXXXXDAATVEQSRLLVSQVSKHALQLMQDPYGNYVVQYVLGICSHDEAVALVNVPLGKVGNEKMVAMLSMQKFSSNVIEKCMDRASEEIIVKYVHELADPAAMRPLLQ 439          
BLAST of mRNA_L-elsbetiae_contig6224.14818.1 vs. uniprot
Match: D8LGB5_ECTSI (PUM-HD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGB5_ECTSI)

HSP 1 Score: 247 bits (630), Expect = 5.290e-79
Identity = 119/134 (88.81%), Postives = 126/134 (94.03%), Query Frame = 0
Query:    1 QIGCRLLQLKLDQGDPSFVAKICGEAQPYLGEMMKDPFGNYLFQKIVDNVDEAARTDLVTQVAGEMVDAGMNLHGTRSVQKVIEVCRGTPSQVALVVAALRDATVPLCLDTNGNHVVQRLLQHLAPADNAFVFE 134
            QIGCRLLQLKLDQGDP FV+KICGEAQPYL EMMKDPFGNYLFQKI D VDE  RTDLV QVAG+MV+AGMNLHGTRSVQK+IEVCRGTPSQVA+VV+AL+DATVPLCLDTNGNHVVQRLLQHLAP DNAFVFE
Sbjct:   78 QIGCRLLQLKLDQGDPMFVSKICGEAQPYLSEMMKDPFGNYLFQKIADKVDEDGRTDLVNQVAGQMVEAGMNLHGTRSVQKIIEVCRGTPSQVAVVVSALKDATVPLCLDTNGNHVVQRLLQHLAPTDNAFVFE 211          
BLAST of mRNA_L-elsbetiae_contig6224.14818.1 vs. uniprot
Match: A0A1V9YPP5_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YPP5_9STRA)

HSP 1 Score: 249 bits (635), Expect = 1.910e-75
Identity = 134/257 (52.14%), Postives = 172/257 (66.93%), Query Frame = 0
Query:    1 QIGCRLLQLKLD-QGDPSFVAKICGEAQPYLGEMMKDPFGNYLFQKIVDNVDEAARTDLVTQVAGEMVDAGMNLHGTRSVQKVIEVCRGTPSQVALVVAALRDATVPLCLDTNGNHVVQRLLQHLAPAD-NAFVFEMLAEACVAVATHRHGCCVLQRAIDAATVDQSRLLVSHVSQHALQLMQDPYGNYVVQYILGICSREEAETLVNVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQ 255
            Q GCRLLQ +LD  G P     I  EA P+L +MM DPFGNYLFQK+++ V +  R ++V +V+  +V A +NLHGTRSVQKV+EVC    +   ++V ALR   V LC+D+NGNHV+QR LQ L PAD N FVF+ +A  C  V THRHGCCVLQR +DAA   Q R ++S V  HA++LMQDPYGNYVVQY+L  C  +E   L+    G V  LS+QKFSSNV+EKC++ A  E+   +V E+     M  +LQ
Sbjct:  269 QNGCRLLQEQLDCVGRPDLCDVIYTEALPHLVDMMVDPFGNYLFQKLLERVADDQRLEIVKRVSPHLVAAALNLHGTRSVQKVVEVCATDRTLATIIVKALRGDAVRLCIDSNGNHVIQRALQFL-PADFNQFVFDAVATDCTVVGTHRHGCCVLQRCVDAANEAQKRAVISQVELHAMKLMQDPYGNYVVQYVLDACPNDETVGLMAKCAGHVYELSVQKFSSNVVEKCLELAPYELRQAFVREIIASPRMHRMLQ 524          
BLAST of mRNA_L-elsbetiae_contig6224.14818.1 vs. uniprot
Match: A0A833SFT8_PHYIN (Pumilio-family RNA binding repeat domain-containing protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SFT8_PHYIN)

HSP 1 Score: 244 bits (623), Expect = 2.290e-74
Identity = 131/287 (45.64%), Postives = 176/287 (61.32%), Query Frame = 0
Query:    1 QIGCRLLQLKLDQGDPSFVAKIC-GEAQPYLGEMMKDPFGNYLFQKIVDNVDEAARTDLVTQVAGEMVDAGMNLHGTRSVQKVIEVC-------------------------------RGTPSQVALVVAALRDATVPLCLDTNGNHVVQRLLQHLAPADNAFVFEMLAEACVAVATHRHGCCVLQRAIDAATVDQSRLLVSHVSQHALQLMQDPYGNYVVQYILGICSREEAETLVNVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQ 255
            Q GCRLLQ +LD  D   +  +   E+  +L EMM DPFGNYLFQK+++ V E  R  ++ +V+  +V A +NLHGTRSVQKV+EVC                               R T S   L+V AL+D  V LC+D+NGNHV+QR LQ + P  N FVF+ + + C  V THRHGCCVLQR +DAA   Q   +++ V + A++LMQDPYGNYVVQY+L  C+ EEA  ++  P+G +  LS+QKFSSNVIEKC+++A E +  KY+ E+     M  +LQ
Sbjct:   94 QNGCRLLQEQLDYEDRGDLCDVIYQESLEHLAEMMVDPFGNYLFQKLLERVKEKQRLVIIRRVSSNLVAAALNLHGTRSVQKVVEVCATSSSVIEEDFDEEEEGEEYGYEERPEGGKGRRTTSLPDLIVEALKDDAVRLCIDSNGNHVIQRALQFMKPEYNQFVFDAVCKECTTVGTHRHGCCVLQRCLDAANKTQKAEVIAQVERQAMKLMQDPYGNYVVQYVLDSCTAEEAFGVIMKPLGHIYELSVQKFSSNVIEKCLEKAPERVRQKYIAEITSCPKMNKMLQ 380          
BLAST of mRNA_L-elsbetiae_contig6224.14818.1 vs. uniprot
Match: A0A024GRC2_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GRC2_9STRA)

HSP 1 Score: 251 bits (642), Expect = 3.490e-74
Identity = 132/266 (49.62%), Postives = 176/266 (66.17%), Query Frame = 0
Query:    1 QIGCRLLQLKLDQGDPSFVAKIC-GEAQPYLGEMMKDPFGNYLFQKIVDNVDEAARTDLVTQVAGEMVDAGMNLHGTRSVQKVIEVCRGTPSQVA----------LVVAALRDATVPLCLDTNGNHVVQRLLQHLAPADNAFVFEMLAEACVAVATHRHGCCVLQRAIDAATVDQSRLLVSHVSQHALQLMQDPYGNYVVQYILGICSREEAETLVNVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQ 255
            Q GCRLLQ +L+  D   + +I   E+  +L EMM DPFGNYLFQK++   DE  R  +V  V   ++ A +NLHGTRSVQKV+E+C  T S+ +          LVV AL+D  V LC+D+NGNHV+QR LQ+       F+F+ ++  C  V THRHGCCVLQR +DAA   Q + L++ V  HA++LMQDPYGNYVVQY+L  C+ EEA  ++  P+G V  LS+QKFSSNV+EKC+++A E +  +YV EL   A M+ LLQ
Sbjct:  551 QNGCRLLQEQLEYDDRKVLWQIIFQESLDHLPEMMVDPFGNYLFQKLIARADEWQRLAIVRAVCPHLMAAALNLHGTRSVQKVVEICANTKSEHSNEENGMDLSELVVEALKDDAVRLCIDSNGNHVIQRALQYFQSKSTQFIFDAVSRECTTVGTHRHGCCVLQRCLDAANTLQKKELIAQVENHAMKLMQDPYGNYVVQYVLDACTAEEAIGIMIKPLGHVFELSVQKFSSNVVEKCLEKAPERIRRRYVEELIGCAKMQRLLQ 816          
BLAST of mRNA_L-elsbetiae_contig6224.14818.1 vs. uniprot
Match: F0WL38_9STRA (Uncharacterized protein AlNc14C140G7225 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WL38_9STRA)

HSP 1 Score: 250 bits (639), Expect = 7.970e-74
Identity = 132/265 (49.81%), Postives = 177/265 (66.79%), Query Frame = 0
Query:    1 QIGCRLLQLKLDQGDPSFVAKIC-GEAQPYLGEMMKDPFGNYLFQKIVDNVDEAARTDLVTQVAGEMVDAGMNLHGTRSVQKVIEVCRGTPSQVA---------LVVAALRDATVPLCLDTNGNHVVQRLLQHLAPADNAFVFEMLAEACVAVATHRHGCCVLQRAIDAATVDQSRLLVSHVSQHALQLMQDPYGNYVVQYILGICSREEAETLVNVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQ 255
            Q GCRLLQ +L+  D   + +I   E+  +L EMM DPFGNYLFQK++   DE  R  +V  V   ++ A +NLHGTRSVQKV+E+C  + S+           L+V AL+D  V LC+D+NGNHV+QR LQ+  P    F+F+ ++  C  V THRHGCCVLQR +DAA V Q + L++ V  HA++LMQDPYGNYVVQY+L  C+ EEA  ++  P+G V  LS+QKFSSNV+EKC+++A E +  +YV EL   A M+ LLQ
Sbjct:  539 QNGCRLLQEQLEYDDRKTLWQIIFQESLHHLPEMMVDPFGNYLFQKLIARADEWQRLAIVRAVCPHLMAAALNLHGTRSVQKVVEICAISQSEKKDATSIDLPQLIVHALKDDAVRLCIDSNGNHVIQRALQYFNPKFTQFIFDAVSRECTTVGTHRHGCCVLQRCLDAANVTQKKELIAQVEYHAMKLMQDPYGNYVVQYVLDACTAEEAIGIMMKPLGHVFELSIQKFSSNVVEKCLEKAPERIRRRYVEELIVCAKMQRLLQ 803          
BLAST of mRNA_L-elsbetiae_contig6224.14818.1 vs. uniprot
Match: A0A8K1C9G3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C9G3_PYTOL)

HSP 1 Score: 249 bits (637), Expect = 3.930e-73
Identity = 129/272 (47.43%), Postives = 177/272 (65.07%), Query Frame = 0
Query:    1 QIGCRLLQLKLD--QGDPSFVAKICGEAQPYLGEMMKDPFGNYLFQKIVDNVDEAARTDLVTQVAGEMVDAGMNLHGTRSVQKVIEVCRGTPSQVAL---------------VVAALRDATVPLCLDTNGNHVVQRLLQHLAPADNAFVFEMLAEACVAVATHRHGCCVLQRAIDAATVDQSRLLVSHVSQHALQLMQDPYGNYVVQYILGICSREEAETLVNVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQ 255
            Q GCRLLQ +LD  +        I GE+  +L EMM DPFGNYLFQK+++      R +++ +V+G +V A +NLHGTRSVQKV+EVC  +   V L               +V AL+D  V LC+D+NGNHV+QR LQ + P  N FVF+ + + C  V THRHGCCVLQR +DAA   Q R +++ V + A++LMQDPYGNYVVQY+L  C+ EEA  ++  P+G V  LS+QKFSSNVIEKC+++A   ++ +Y+ E+     M+ +LQ
Sbjct:  576 QNGCRLLQEQLDFYEERKELCDVIYGESVEHLAEMMVDPFGNYLFQKLLERAKPLQRLEIIRRVSGNLVAAALNLHGTRSVQKVVEVCATSAEVVELDSDGNELRRVNLPDLIVEALKDDAVRLCIDSNGNHVIQRALQFMKPEYNQFVFDAVCKECTTVGTHRHGCCVLQRCLDAANDTQKREVITQVEKQAMKLMQDPYGNYVVQYVLDSCTAEEAYGVIVKPLGNVFELSIQKFSSNVIEKCLEKAPPVVLTQYIDEITTCPKMQKMLQ 847          
BLAST of mRNA_L-elsbetiae_contig6224.14818.1 vs. uniprot
Match: A0A662WKH4_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WKH4_9STRA)

HSP 1 Score: 244 bits (623), Expect = 2.540e-72
Identity = 129/290 (44.48%), Postives = 178/290 (61.38%), Query Frame = 0
Query:    1 QIGCRLLQLKLDQGDPSFVAKIC-GEAQPYLGEMMKDPFGNYLFQKIVDNVDEAARTDLVTQVAGEMVDAGMNLHGTRSVQKVIEVCRGTPSQVA----------------------------------LVVAALRDATVPLCLDTNGNHVVQRLLQHLAPADNAFVFEMLAEACVAVATHRHGCCVLQRAIDAATVDQSRLLVSHVSQHALQLMQDPYGNYVVQYILGICSREEAETLVNVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQ 255
            Q GCRLLQ +LD  D + + ++   E+  +L EMM DPFGNYLFQK+++ V+E  R  ++ +V+  +V A +NLHGTRSVQKV+EVC  +P  +                                   L+V AL+D  V LC+D+NGNHV+QR LQ + P  N FVF+ + + C  V THRHGCCVLQR +DAA   Q   ++  V + A++LMQDPYGNYVVQY+L  C+ EEA  ++  P+G +  LS+QKFSSNVIEKC+++A E +  KY+ E+     M  +LQ
Sbjct:  319 QNGCRLLQEQLDYEDRADLCEVIYQESLEHLAEMMVDPFGNYLFQKLLERVNEKQRLVIIRRVSSNLVAAALNLHGTRSVQKVVEVCATSPDVIEEDYEDEDAEDYEYGKEREDRPEGGGQRRTTSLPDLIVEALKDDAVRLCIDSNGNHVIQRALQFMRPEYNQFVFDAVCKECTTVGTHRHGCCVLQRCLDAANKTQKAEVIEQVERQAMKLMQDPYGNYVVQYVLDSCTAEEAFGVILKPLGHIFELSVQKFSSNVIEKCLEKAPERVRQKYIAEITSCPKMNKMLQ 608          
BLAST of mRNA_L-elsbetiae_contig6224.14818.1 vs. uniprot
Match: V9FR80_PHYPR (Uncharacterized protein n=12 Tax=Phytophthora TaxID=4783 RepID=V9FR80_PHYPR)

HSP 1 Score: 246 bits (629), Expect = 6.830e-72
Identity = 129/286 (45.10%), Postives = 179/286 (62.59%), Query Frame = 0
Query:    1 QIGCRLLQLKLDQGDPSFVAKIC-GEAQPYLGEMMKDPFGNYLFQKIVDNVDEAARTDLVTQVAGEMVDAGMNLHGTRSVQKVIEVCRGTPSQVA------------------------------LVVAALRDATVPLCLDTNGNHVVQRLLQHLAPADNAFVFEMLAEACVAVATHRHGCCVLQRAIDAATVDQSRLLVSHVSQHALQLMQDPYGNYVVQYILGICSREEAETLVNVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQ 255
            Q GCRLLQ +LD  D + + ++   E+  +L EMM DPFGNYLFQK+++ V+E  R  ++ +V+  +V A +NLHGTRSVQKV+EVC  +P  +                               L+V AL+D  V LC+D+NGNHV+QR LQ + P  N FVF+ + + C  V THRHGCCVLQR +DAA   Q   ++  V + A++LMQDPYGNYVVQY+L  C+ EEA  ++  P+G +  LS+QKFSSNVIEKC+++A E +  KY+ E+ +   M  +LQ
Sbjct:  564 QNGCRLLQEQLDYEDRADLCEVIYQESLEHLAEMMVDPFGNYLFQKLLERVNEKQRLVIIRRVSSNLVAAALNLHGTRSVQKVVEVCATSPDVIEEDYEDEEGEDYGYVREERPEGGRRTTSLPDLIVEALKDDAVRLCIDSNGNHVIQRALQFMKPEYNQFVFDAVCKECTTVGTHRHGCCVLQRCLDAANKTQKAEVIEQVERQAMKLMQDPYGNYVVQYVLDSCTAEEAFGVIMKPLGHIYELSVQKFSSNVIEKCLEKAPERVRQKYIAEITNCPKMNKMLQ 849          
BLAST of mRNA_L-elsbetiae_contig6224.14818.1 vs. uniprot
Match: A0A485KML4_9STRA (Aste57867_9189 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KML4_9STRA)

HSP 1 Score: 241 bits (616), Expect = 8.700e-72
Identity = 129/258 (50.00%), Postives = 174/258 (67.44%), Query Frame = 0
Query:    1 QIGCRLLQLKLDQGDPSFVAK-ICGEAQPYLGEMMKDPFGNYLFQKIVDNVDEAARTDLVTQVAGEMVDAGMNLHGTRSVQKVIEVCRGT--PSQVALVVAALRDATVPLCLDTNGNHVVQRLLQHLAPADNAFVFEMLAEACVAVATHRHGCCVLQRAIDAATVDQSRLLVSHVSQHALQLMQDPYGNYVVQYILGICSREEAETLVNVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQ 255
            Q GCRLLQ +LD  D S +   I  E+ P+L +MM DPFGNYLFQK+++ V +A R  +V  VA  +V A +NLHGTRSVQKV+E+C  +  P+ V L+V AL++  V LC+D+NGNHV+QR LQ++    N FVF+ +   C  V THRHGCCVLQR +DAA V Q   +++ V  HA++LMQDPYGNYVVQY+L  CS  +A  ++   +  V  LS+QKFSSNVIEKC++ A + +   +V E+     M  +LQ
Sbjct:  351 QNGCRLLQEQLDFVDRSDLCDLIYTESLPHLVDMMVDPFGNYLFQKLLERVTDAQRLVVVQHVAFHLVAAALNLHGTRSVQKVVEICASSSQPALVQLIVDALKEDAVRLCIDSNGNHVIQRALQYMPSEYNQFVFDAVCAECTVVGTHRHGCCVLQRCVDAANVVQKAEVIAQVEAHAMKLMQDPYGNYVVQYVLDACSAADALGVMQKCVTHVFELSIQKFSSNVIEKCLELAPDGLRQTFVREIIACPRMYRMLQ 608          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6224.14818.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K3P5_9PHAE1.070e-12877.73PUM-HD domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LGB5_ECTSI5.290e-7988.81PUM-HD domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A1V9YPP5_9STRA1.910e-7552.14Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A833SFT8_PHYIN2.290e-7445.64Pumilio-family RNA binding repeat domain-containin... [more]
A0A024GRC2_9STRA3.490e-7449.62Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
F0WL38_9STRA7.970e-7449.81Uncharacterized protein AlNc14C140G7225 n=1 Tax=Al... [more]
A0A8K1C9G3_PYTOL3.930e-7347.43Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A662WKH4_9STRA2.540e-7244.48Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
V9FR80_PHYPR6.830e-7245.10Uncharacterized protein n=12 Tax=Phytophthora TaxI... [more]
A0A485KML4_9STRA8.700e-7250.00Aste57867_9189 protein n=1 Tax=Aphanomyces stellat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001313Pumilio RNA-binding repeatSMARTSM00025pum_5coord: 61..98
e-value: 450.0
score: 0.2
coord: 135..170
e-value: 0.02
score: 24.1
coord: 99..134
e-value: 2.0E-4
score: 30.7
coord: 171..206
e-value: 2.1E-6
score: 37.3
coord: 207..242
e-value: 14.0
score: 11.8
coord: 25..60
e-value: 0.0046
score: 26.2
IPR001313Pumilio RNA-binding repeatPFAMPF00806PUFcoord: 143..168
e-value: 4.5E-4
score: 19.7
coord: 173..202
e-value: 7.7E-8
score: 31.6
coord: 102..126
e-value: 2.4E-5
score: 23.8
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 135..170
score: 8.571
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 61..98
score: 6.541
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 99..134
score: 9.131
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 207..242
score: 6.331
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 171..206
score: 10.857
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 25..60
score: 8.827
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 1..24
score: 4.791
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..251
e-value: 1.8E-82
score: 279.4
NoneNo IPR availablePANTHERPTHR12537RNA BINDING PROTEIN PUMILIO-RELATEDcoord: 1..255
NoneNo IPR availablePANTHERPTHR12537:SF13PUMILIO HOMOLOGY DOMAIN FAMILY MEMBER 4coord: 1..255
IPR033133Pumilio homology domainPROSITEPS50303PUM_HDcoord: 1..255
score: 65.626
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 1..247

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6224contigL-elsbetiae_contig6224:7385..11339 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6224.14818.1mRNA_L-elsbetiae_contig6224.14818.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6224 7385..11339 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6224.14818.1 ID=prot_L-elsbetiae_contig6224.14818.1|Name=mRNA_L-elsbetiae_contig6224.14818.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=255bp
QIGCRLLQLKLDQGDPSFVAKICGEAQPYLGEMMKDPFGNYLFQKIVDNV
DEAARTDLVTQVAGEMVDAGMNLHGTRSVQKVIEVCRGTPSQVALVVAAL
RDATVPLCLDTNGNHVVQRLLQHLAPADNAFVFEMLAEACVAVATHRHGC
CVLQRAIDAATVDQSRLLVSHVSQHALQLMQDPYGNYVVQYILGICSREE
AETLVNVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAM
RPLLQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001313Pumilio_RNA-bd_rpt
IPR011989ARM-like
IPR033133PUM-HD
IPR016024ARM-type_fold