mRNA_L-elsbetiae_contig6224.14818.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6224.14818.1 vs. uniprot
Match: A0A6H5K3P5_9PHAE (PUM-HD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3P5_9PHAE) HSP 1 Score: 382 bits (982), Expect = 1.070e-128 Identity = 199/256 (77.73%), Postives = 212/256 (82.81%), Query Frame = 1 Query: 16 LLQLKLDQGDPSFVAKICGEAQPYLGEMMKDPFGNYLFQKIVDNVDEAARTDLVTQVAGEMVDAGMNLHGTRSVQKVIEVCRGTPSQVALVVAALRDATVPLCLDTNGNHVVQRLLQHLAPADNAFVFEMLAEACVAVATHRHGCCVLQRAIDAATVDQSRLLVSHVSQHALQLMQDPYGNYVVQYILGICSREEAETLVNVPIGKV------AMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQ 765 LLQLKLDQGDP FV+KICGEAQPYL EMMKDPFGNYLFQKI D VDE RTDLV QVAG+MV+AGMNLHGTRSVQK+IEVCRGTPSQVA+VV+AL+DATVPLCLDTNGNHVVQRLLQHLAP DNAF DAATV+QSRLLVS VS+HALQLMQDPYGNYVVQY+LGICS +EA LVNVP+GKV AMLSMQKFSSNVIEKCMDRASEE+IVKYVHELADPAAMRPLLQ Sbjct: 184 LLQLKLDQGDPVFVSKICGEAQPYLSEMMKDPFGNYLFQKIADKVDEDGRTDLVNQVAGQMVEAGMNLHGTRSVQKIIEVCRGTPSQVAVVVSALKDATVPLCLDTNGNHVVQRLLQHLAPTDNAFXXXXXXXXXXXXXXXXXXXXXXXXXXDAATVEQSRLLVSQVSKHALQLMQDPYGNYVVQYVLGICSHDEAVALVNVPLGKVGNEKMVAMLSMQKFSSNVIEKCMDRASEEIIVKYVHELADPAAMRPLLQ 439
BLAST of mRNA_L-elsbetiae_contig6224.14818.1 vs. uniprot
Match: D8LGB5_ECTSI (PUM-HD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGB5_ECTSI) HSP 1 Score: 247 bits (630), Expect = 5.290e-79 Identity = 119/134 (88.81%), Postives = 126/134 (94.03%), Query Frame = 1 Query: 1 QIGCRLLQLKLDQGDPSFVAKICGEAQPYLGEMMKDPFGNYLFQKIVDNVDEAARTDLVTQVAGEMVDAGMNLHGTRSVQKVIEVCRGTPSQVALVVAALRDATVPLCLDTNGNHVVQRLLQHLAPADNAFVFE 402 QIGCRLLQLKLDQGDP FV+KICGEAQPYL EMMKDPFGNYLFQKI D VDE RTDLV QVAG+MV+AGMNLHGTRSVQK+IEVCRGTPSQVA+VV+AL+DATVPLCLDTNGNHVVQRLLQHLAP DNAFVFE Sbjct: 78 QIGCRLLQLKLDQGDPMFVSKICGEAQPYLSEMMKDPFGNYLFQKIADKVDEDGRTDLVNQVAGQMVEAGMNLHGTRSVQKIIEVCRGTPSQVAVVVSALKDATVPLCLDTNGNHVVQRLLQHLAPTDNAFVFE 211
BLAST of mRNA_L-elsbetiae_contig6224.14818.1 vs. uniprot
Match: A0A1V9YPP5_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YPP5_9STRA) HSP 1 Score: 249 bits (635), Expect = 1.910e-75 Identity = 134/257 (52.14%), Postives = 172/257 (66.93%), Query Frame = 1 Query: 1 QIGCRLLQLKLD-QGDPSFVAKICGEAQPYLGEMMKDPFGNYLFQKIVDNVDEAARTDLVTQVAGEMVDAGMNLHGTRSVQKVIEVCRGTPSQVALVVAALRDATVPLCLDTNGNHVVQRLLQHLAPAD-NAFVFEMLAEACVAVATHRHGCCVLQRAIDAATVDQSRLLVSHVSQHALQLMQDPYGNYVVQYILGICSREEAETLVNVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQ 765 Q GCRLLQ +LD G P I EA P+L +MM DPFGNYLFQK+++ V + R ++V +V+ +V A +NLHGTRSVQKV+EVC + ++V ALR V LC+D+NGNHV+QR LQ L PAD N FVF+ +A C V THRHGCCVLQR +DAA Q R ++S V HA++LMQDPYGNYVVQY+L C +E L+ G V LS+QKFSSNV+EKC++ A E+ +V E+ M +LQ Sbjct: 269 QNGCRLLQEQLDCVGRPDLCDVIYTEALPHLVDMMVDPFGNYLFQKLLERVADDQRLEIVKRVSPHLVAAALNLHGTRSVQKVVEVCATDRTLATIIVKALRGDAVRLCIDSNGNHVIQRALQFL-PADFNQFVFDAVATDCTVVGTHRHGCCVLQRCVDAANEAQKRAVISQVELHAMKLMQDPYGNYVVQYVLDACPNDETVGLMAKCAGHVYELSVQKFSSNVVEKCLELAPYELRQAFVREIIASPRMHRMLQ 524
BLAST of mRNA_L-elsbetiae_contig6224.14818.1 vs. uniprot
Match: A0A833SFT8_PHYIN (Pumilio-family RNA binding repeat domain-containing protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SFT8_PHYIN) HSP 1 Score: 244 bits (623), Expect = 2.290e-74 Identity = 131/287 (45.64%), Postives = 176/287 (61.32%), Query Frame = 1 Query: 1 QIGCRLLQLKLDQGDPSFVAKIC-GEAQPYLGEMMKDPFGNYLFQKIVDNVDEAARTDLVTQVAGEMVDAGMNLHGTRSVQKVIEVC-------------------------------RGTPSQVALVVAALRDATVPLCLDTNGNHVVQRLLQHLAPADNAFVFEMLAEACVAVATHRHGCCVLQRAIDAATVDQSRLLVSHVSQHALQLMQDPYGNYVVQYILGICSREEAETLVNVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQ 765 Q GCRLLQ +LD D + + E+ +L EMM DPFGNYLFQK+++ V E R ++ +V+ +V A +NLHGTRSVQKV+EVC R T S L+V AL+D V LC+D+NGNHV+QR LQ + P N FVF+ + + C V THRHGCCVLQR +DAA Q +++ V + A++LMQDPYGNYVVQY+L C+ EEA ++ P+G + LS+QKFSSNVIEKC+++A E + KY+ E+ M +LQ Sbjct: 94 QNGCRLLQEQLDYEDRGDLCDVIYQESLEHLAEMMVDPFGNYLFQKLLERVKEKQRLVIIRRVSSNLVAAALNLHGTRSVQKVVEVCATSSSVIEEDFDEEEEGEEYGYEERPEGGKGRRTTSLPDLIVEALKDDAVRLCIDSNGNHVIQRALQFMKPEYNQFVFDAVCKECTTVGTHRHGCCVLQRCLDAANKTQKAEVIAQVERQAMKLMQDPYGNYVVQYVLDSCTAEEAFGVIMKPLGHIYELSVQKFSSNVIEKCLEKAPERVRQKYIAEITSCPKMNKMLQ 380
BLAST of mRNA_L-elsbetiae_contig6224.14818.1 vs. uniprot
Match: A0A024GRC2_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GRC2_9STRA) HSP 1 Score: 251 bits (642), Expect = 3.490e-74 Identity = 132/266 (49.62%), Postives = 176/266 (66.17%), Query Frame = 1 Query: 1 QIGCRLLQLKLDQGDPSFVAKIC-GEAQPYLGEMMKDPFGNYLFQKIVDNVDEAARTDLVTQVAGEMVDAGMNLHGTRSVQKVIEVCRGTPSQVA----------LVVAALRDATVPLCLDTNGNHVVQRLLQHLAPADNAFVFEMLAEACVAVATHRHGCCVLQRAIDAATVDQSRLLVSHVSQHALQLMQDPYGNYVVQYILGICSREEAETLVNVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQ 765 Q GCRLLQ +L+ D + +I E+ +L EMM DPFGNYLFQK++ DE R +V V ++ A +NLHGTRSVQKV+E+C T S+ + LVV AL+D V LC+D+NGNHV+QR LQ+ F+F+ ++ C V THRHGCCVLQR +DAA Q + L++ V HA++LMQDPYGNYVVQY+L C+ EEA ++ P+G V LS+QKFSSNV+EKC+++A E + +YV EL A M+ LLQ Sbjct: 551 QNGCRLLQEQLEYDDRKVLWQIIFQESLDHLPEMMVDPFGNYLFQKLIARADEWQRLAIVRAVCPHLMAAALNLHGTRSVQKVVEICANTKSEHSNEENGMDLSELVVEALKDDAVRLCIDSNGNHVIQRALQYFQSKSTQFIFDAVSRECTTVGTHRHGCCVLQRCLDAANTLQKKELIAQVENHAMKLMQDPYGNYVVQYVLDACTAEEAIGIMIKPLGHVFELSVQKFSSNVVEKCLEKAPERIRRRYVEELIGCAKMQRLLQ 816
BLAST of mRNA_L-elsbetiae_contig6224.14818.1 vs. uniprot
Match: F0WL38_9STRA (Uncharacterized protein AlNc14C140G7225 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WL38_9STRA) HSP 1 Score: 250 bits (639), Expect = 7.970e-74 Identity = 132/265 (49.81%), Postives = 177/265 (66.79%), Query Frame = 1 Query: 1 QIGCRLLQLKLDQGDPSFVAKIC-GEAQPYLGEMMKDPFGNYLFQKIVDNVDEAARTDLVTQVAGEMVDAGMNLHGTRSVQKVIEVCRGTPSQVA---------LVVAALRDATVPLCLDTNGNHVVQRLLQHLAPADNAFVFEMLAEACVAVATHRHGCCVLQRAIDAATVDQSRLLVSHVSQHALQLMQDPYGNYVVQYILGICSREEAETLVNVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQ 765 Q GCRLLQ +L+ D + +I E+ +L EMM DPFGNYLFQK++ DE R +V V ++ A +NLHGTRSVQKV+E+C + S+ L+V AL+D V LC+D+NGNHV+QR LQ+ P F+F+ ++ C V THRHGCCVLQR +DAA V Q + L++ V HA++LMQDPYGNYVVQY+L C+ EEA ++ P+G V LS+QKFSSNV+EKC+++A E + +YV EL A M+ LLQ Sbjct: 539 QNGCRLLQEQLEYDDRKTLWQIIFQESLHHLPEMMVDPFGNYLFQKLIARADEWQRLAIVRAVCPHLMAAALNLHGTRSVQKVVEICAISQSEKKDATSIDLPQLIVHALKDDAVRLCIDSNGNHVIQRALQYFNPKFTQFIFDAVSRECTTVGTHRHGCCVLQRCLDAANVTQKKELIAQVEYHAMKLMQDPYGNYVVQYVLDACTAEEAIGIMMKPLGHVFELSIQKFSSNVVEKCLEKAPERIRRRYVEELIVCAKMQRLLQ 803
BLAST of mRNA_L-elsbetiae_contig6224.14818.1 vs. uniprot
Match: A0A8K1C9G3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C9G3_PYTOL) HSP 1 Score: 249 bits (637), Expect = 3.930e-73 Identity = 129/272 (47.43%), Postives = 177/272 (65.07%), Query Frame = 1 Query: 1 QIGCRLLQLKLD--QGDPSFVAKICGEAQPYLGEMMKDPFGNYLFQKIVDNVDEAARTDLVTQVAGEMVDAGMNLHGTRSVQKVIEVCRGTPSQVAL---------------VVAALRDATVPLCLDTNGNHVVQRLLQHLAPADNAFVFEMLAEACVAVATHRHGCCVLQRAIDAATVDQSRLLVSHVSQHALQLMQDPYGNYVVQYILGICSREEAETLVNVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQ 765 Q GCRLLQ +LD + I GE+ +L EMM DPFGNYLFQK+++ R +++ +V+G +V A +NLHGTRSVQKV+EVC + V L +V AL+D V LC+D+NGNHV+QR LQ + P N FVF+ + + C V THRHGCCVLQR +DAA Q R +++ V + A++LMQDPYGNYVVQY+L C+ EEA ++ P+G V LS+QKFSSNVIEKC+++A ++ +Y+ E+ M+ +LQ Sbjct: 576 QNGCRLLQEQLDFYEERKELCDVIYGESVEHLAEMMVDPFGNYLFQKLLERAKPLQRLEIIRRVSGNLVAAALNLHGTRSVQKVVEVCATSAEVVELDSDGNELRRVNLPDLIVEALKDDAVRLCIDSNGNHVIQRALQFMKPEYNQFVFDAVCKECTTVGTHRHGCCVLQRCLDAANDTQKREVITQVEKQAMKLMQDPYGNYVVQYVLDSCTAEEAYGVIVKPLGNVFELSIQKFSSNVIEKCLEKAPPVVLTQYIDEITTCPKMQKMLQ 847
BLAST of mRNA_L-elsbetiae_contig6224.14818.1 vs. uniprot
Match: A0A662WKH4_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WKH4_9STRA) HSP 1 Score: 244 bits (623), Expect = 2.540e-72 Identity = 129/290 (44.48%), Postives = 178/290 (61.38%), Query Frame = 1 Query: 1 QIGCRLLQLKLDQGDPSFVAKIC-GEAQPYLGEMMKDPFGNYLFQKIVDNVDEAARTDLVTQVAGEMVDAGMNLHGTRSVQKVIEVCRGTPSQVA----------------------------------LVVAALRDATVPLCLDTNGNHVVQRLLQHLAPADNAFVFEMLAEACVAVATHRHGCCVLQRAIDAATVDQSRLLVSHVSQHALQLMQDPYGNYVVQYILGICSREEAETLVNVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQ 765 Q GCRLLQ +LD D + + ++ E+ +L EMM DPFGNYLFQK+++ V+E R ++ +V+ +V A +NLHGTRSVQKV+EVC +P + L+V AL+D V LC+D+NGNHV+QR LQ + P N FVF+ + + C V THRHGCCVLQR +DAA Q ++ V + A++LMQDPYGNYVVQY+L C+ EEA ++ P+G + LS+QKFSSNVIEKC+++A E + KY+ E+ M +LQ Sbjct: 319 QNGCRLLQEQLDYEDRADLCEVIYQESLEHLAEMMVDPFGNYLFQKLLERVNEKQRLVIIRRVSSNLVAAALNLHGTRSVQKVVEVCATSPDVIEEDYEDEDAEDYEYGKEREDRPEGGGQRRTTSLPDLIVEALKDDAVRLCIDSNGNHVIQRALQFMRPEYNQFVFDAVCKECTTVGTHRHGCCVLQRCLDAANKTQKAEVIEQVERQAMKLMQDPYGNYVVQYVLDSCTAEEAFGVILKPLGHIFELSVQKFSSNVIEKCLEKAPERVRQKYIAEITSCPKMNKMLQ 608
BLAST of mRNA_L-elsbetiae_contig6224.14818.1 vs. uniprot
Match: V9FR80_PHYPR (Uncharacterized protein n=12 Tax=Phytophthora TaxID=4783 RepID=V9FR80_PHYPR) HSP 1 Score: 246 bits (629), Expect = 6.830e-72 Identity = 129/286 (45.10%), Postives = 179/286 (62.59%), Query Frame = 1 Query: 1 QIGCRLLQLKLDQGDPSFVAKIC-GEAQPYLGEMMKDPFGNYLFQKIVDNVDEAARTDLVTQVAGEMVDAGMNLHGTRSVQKVIEVCRGTPSQVA------------------------------LVVAALRDATVPLCLDTNGNHVVQRLLQHLAPADNAFVFEMLAEACVAVATHRHGCCVLQRAIDAATVDQSRLLVSHVSQHALQLMQDPYGNYVVQYILGICSREEAETLVNVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQ 765 Q GCRLLQ +LD D + + ++ E+ +L EMM DPFGNYLFQK+++ V+E R ++ +V+ +V A +NLHGTRSVQKV+EVC +P + L+V AL+D V LC+D+NGNHV+QR LQ + P N FVF+ + + C V THRHGCCVLQR +DAA Q ++ V + A++LMQDPYGNYVVQY+L C+ EEA ++ P+G + LS+QKFSSNVIEKC+++A E + KY+ E+ + M +LQ Sbjct: 564 QNGCRLLQEQLDYEDRADLCEVIYQESLEHLAEMMVDPFGNYLFQKLLERVNEKQRLVIIRRVSSNLVAAALNLHGTRSVQKVVEVCATSPDVIEEDYEDEEGEDYGYVREERPEGGRRTTSLPDLIVEALKDDAVRLCIDSNGNHVIQRALQFMKPEYNQFVFDAVCKECTTVGTHRHGCCVLQRCLDAANKTQKAEVIEQVERQAMKLMQDPYGNYVVQYVLDSCTAEEAFGVIMKPLGHIYELSVQKFSSNVIEKCLEKAPERVRQKYIAEITNCPKMNKMLQ 849
BLAST of mRNA_L-elsbetiae_contig6224.14818.1 vs. uniprot
Match: A0A485KML4_9STRA (Aste57867_9189 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KML4_9STRA) HSP 1 Score: 241 bits (616), Expect = 8.700e-72 Identity = 129/258 (50.00%), Postives = 174/258 (67.44%), Query Frame = 1 Query: 1 QIGCRLLQLKLDQGDPSFVAK-ICGEAQPYLGEMMKDPFGNYLFQKIVDNVDEAARTDLVTQVAGEMVDAGMNLHGTRSVQKVIEVCRGT--PSQVALVVAALRDATVPLCLDTNGNHVVQRLLQHLAPADNAFVFEMLAEACVAVATHRHGCCVLQRAIDAATVDQSRLLVSHVSQHALQLMQDPYGNYVVQYILGICSREEAETLVNVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQ 765 Q GCRLLQ +LD D S + I E+ P+L +MM DPFGNYLFQK+++ V +A R +V VA +V A +NLHGTRSVQKV+E+C + P+ V L+V AL++ V LC+D+NGNHV+QR LQ++ N FVF+ + C V THRHGCCVLQR +DAA V Q +++ V HA++LMQDPYGNYVVQY+L CS +A ++ + V LS+QKFSSNVIEKC++ A + + +V E+ M +LQ Sbjct: 351 QNGCRLLQEQLDFVDRSDLCDLIYTESLPHLVDMMVDPFGNYLFQKLLERVTDAQRLVVVQHVAFHLVAAALNLHGTRSVQKVVEICASSSQPALVQLIVDALKEDAVRLCIDSNGNHVIQRALQYMPSEYNQFVFDAVCAECTVVGTHRHGCCVLQRCVDAANVVQKAEVIAQVEAHAMKLMQDPYGNYVVQYVLDACSAADALGVMQKCVTHVFELSIQKFSSNVIEKCLELAPDGLRQTFVREIIACPRMYRMLQ 608 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6224.14818.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6224.14818.1 >prot_L-elsbetiae_contig6224.14818.1 ID=prot_L-elsbetiae_contig6224.14818.1|Name=mRNA_L-elsbetiae_contig6224.14818.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=255bp QIGCRLLQLKLDQGDPSFVAKICGEAQPYLGEMMKDPFGNYLFQKIVDNVback to top mRNA from alignment at L-elsbetiae_contig6224:7385..11339+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6224.14818.1 ID=mRNA_L-elsbetiae_contig6224.14818.1|Name=mRNA_L-elsbetiae_contig6224.14818.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3955bp|location=Sequence derived from alignment at L-elsbetiae_contig6224:7385..11339+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6224:7385..11339+ >mRNA_L-elsbetiae_contig6224.14818.1 ID=mRNA_L-elsbetiae_contig6224.14818.1|Name=mRNA_L-elsbetiae_contig6224.14818.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1530bp|location=Sequence derived from alignment at L-elsbetiae_contig6224:7385..11339+ (Laminarionema elsbetiae ELsaHSoW15)back to top |