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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 106.3 |
Seed ortholog evalue | 2.8e-20 |
Seed eggNOG ortholog | 2880.D7FUG3 |
Hectar predicted targeting category | other localisation |
EggNOG free text desc. | SnoaL-like domain |
EggNOG OGs | 2S0Y2@2759,COG4875@1 |
COG Functional cat. | S |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
Ec32 ortholog description | PDZ domain |
Ec32 ortholog | Ec-03_000310.1 |
Exons | 5 |
Model size | 996 |
Cds size | 993 |
Stop | 0 |
Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622815460.2030604-CDS-L-elsbetiae_contig1271:13969..14047 | 1622815460.2030604-CDS-L-elsbetiae_contig1271:13969..14047 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1271 13970..14047 + |
1691682908.3964317-CDS-L-elsbetiae_contig1271:13969..14047 | 1691682908.3964317-CDS-L-elsbetiae_contig1271:13969..14047 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1271 13970..14047 + |
1622815460.2177017-CDS-L-elsbetiae_contig1271:14740..14887 | 1622815460.2177017-CDS-L-elsbetiae_contig1271:14740..14887 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1271 14741..14887 + |
1691682908.4088652-CDS-L-elsbetiae_contig1271:14740..14887 | 1691682908.4088652-CDS-L-elsbetiae_contig1271:14740..14887 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1271 14741..14887 + |
1622815460.2295842-CDS-L-elsbetiae_contig1271:15830..15966 | 1622815460.2295842-CDS-L-elsbetiae_contig1271:15830..15966 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1271 15831..15966 + |
1691682908.4176662-CDS-L-elsbetiae_contig1271:15830..15966 | 1691682908.4176662-CDS-L-elsbetiae_contig1271:15830..15966 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1271 15831..15966 + |
1622815460.239824-CDS-L-elsbetiae_contig1271:17106..17669 | 1622815460.239824-CDS-L-elsbetiae_contig1271:17106..17669 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1271 17107..17669 + |
1691682908.4272537-CDS-L-elsbetiae_contig1271:17106..17669 | 1691682908.4272537-CDS-L-elsbetiae_contig1271:17106..17669 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1271 17107..17669 + |
1622815460.2526624-CDS-L-elsbetiae_contig1271:18675..18744 | 1622815460.2526624-CDS-L-elsbetiae_contig1271:18675..18744 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1271 18676..18744 + |
1691682908.4368534-CDS-L-elsbetiae_contig1271:18675..18744 | 1691682908.4368534-CDS-L-elsbetiae_contig1271:18675..18744 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1271 18676..18744 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1271.2177.1 >prot_L-elsbetiae_contig1271.2177.1 ID=prot_L-elsbetiae_contig1271.2177.1|Name=mRNA_L-elsbetiae_contig1271.2177.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=331bp
EGKAGAGTQPVCGLGASTTASLEPHPRKANTHEVTVTPKVGASGLGLILG KEKEGAGWVVEGFRPMPGGERNPAKAAGIEAGDTLRQVDEVRLGSLSYED GVELLERRKGDVVLTAVRPNAPLGPSSPSPNGDHTPAPFHAEEDRSPRRS SDRSSRRSSRHSPGRSSAAANRSASRSPDRSSRRSSRHSPGRSSTAAANR SASRSPDRSLRRFLMDDASGGGLPPSYPEAKLISELENRAKRIAELEERV ESALSAAAERATQSAVFEEQARKEKSLAGARAKQIAELLEARVESASSLS LAADRAKQGAAGSAPTRGSKGPGPAARPPSA back to topmRNA from alignment at L-elsbetiae_contig1271:13970..18746+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig1271.2177.1 ID=mRNA_L-elsbetiae_contig1271.2177.1|Name=mRNA_L-elsbetiae_contig1271.2177.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4777bp|location=Sequence derived from alignment at L-elsbetiae_contig1271:13970..18746+ (Laminarionema elsbetiae ELsaHSoW15) GAGGGCAAAGCCGGCGCAGGTACTCAGCCCGTCTGCGGGCTTGGTGCCTC
AACGACGGCAAGCCTCGAACCCCACCCGGTGAGGATACTACTTTGTTCTG
TTGTGCTTGTTTGGGTAATCTCTAGGTGCGCGAACGGTCACCCGCCAACC
TTTAAGCTTGGTCAAGTACGAACGGATGCTCTTATTTGTTTGGAAGAGTT
GTGCCTTACTTATGGTGGCACGTGCGTGGGAATATATTCCGGGATATGCA
CGTCGGTATGTTGGTTGGATCTAGAGCGTGCTCTAATTTTTCTTTGAAAG
GGGGTGCAAAAATTTTGCCAAGTGTCGAGACTGGGCGGAGATTGATTTGA
GGGCAGATCTTCCCCTCGTCTTGAAAACAGAACAAAAAGGGAGAATCAAC
GATATCTGTTTTATTGTTGCTTTGCTGGCCCTTCGGGTCCATCTTATTTT
TCGTGTACCTTTTCTTGGGTATAAGTTAGCCTGTGACCACGGGAATTGAC
CGCATCAAGTGTTGGAGTAGTACGGACACTGAGAGGTACGGGATGGAGAG
ATCGGAACGGTTTTTAATGTGAAGACAACATACAACAACGAGCGGACGGG
AAGTAAAAACAAAACAAAAAAAATGACCCACTCACCCACCCACCCCACCT
CCTTCCTCCTCGCCCGGCGCTCCAATACCGCCCCTTTTCTGCTGCTCTTG
CTGCCGCTGCGACCCCTCTCCTGTTGCCACCGCTGCTCGCCCCTGCTGTT
CCGCGGGTTTCCGCTTTGTAGCGGAAGGCTAACACCCACGAGGTTACGGT
TACGCCGAAGGTCGGGGCCAGCGGGCTGGGGCTGATCCTCGGGAAGGAGA
AGGAGGGTGCCGGTTGGGTTGTCGAGGGCTTCCGGCCCATGCCGGGCGGA
GAGCGGAACCCTGCGAAGGTGACACAAGCGCTTTGGGTACCTAGCTGGTA
CGGGTGTTCCGTAGATTCGACGGTTTGTTGGGGGGGTATGTAGGTGCCGG
TCCATGCCGGGTGGAGAGCGGAACCCTTCGAAGGTGACACAAGCGCGCCT
CTGGTACCTGGCTGGTACGGGGGTTCCGTGGATTCGACGGTTTGTGTGGG
GGGGGTATGCAGGTGGGTTCGGGCGCACGGGGGCTGGACCGAAGTTGGCG
GCGATCGCTCGGCTTTGTTTCTCCTGAAAGGGGTATCTACATGTGTAATG
TTGACCTGTGCCTTTCTTTTTGCGTGCGTGTTTCCTCGGGGTGGTGTCAT
GCTTTCTACCGTAGGCGACACAAGATACCACACCCCCTGGATCGAATTTT
AGAGCTCGATTACTCCGTAGCGAAGAAGGTGCCAGCTCCAAACAACATAT
TTTCGGACAGCCCTCGGCTAGATCTTTCCAACGCCACCCCTTTCGGCACT
GTCATTCTTCTCGCTGGGGAGGAATCGAGCTTTGAAAATCTGTCCAGGGG
GTGTGGTATCTTGTGTCACCTACGGTAGTCTCATCGGCTCCCTCAGTTTC
TGTGCTCTCCCTCGTCATTGTCGTTGTCGTTGTCGTTGGTGCTGGTGATG
TTGTCGCAGCTGTTTCCGCCCCCGTGTGGATGCATGCATGCATGCATCCA
TGCATGTGTATGCCTGCGCGCACACACACGCATTCAGCGAACAGGAAAGA
TGCAAAGAACTTTGAGAACGGATTCGACCCAGGATGCCCAACATGTTGTC
TTAAGGCCCTCCCTGCTTGTTCTAATCGTAATTTCGTAGTTCCGTGCTGC
CGTAATGCTCTCACGAAACGAATGCAGGCACGCCAGCCGGGCTAATTCGA
CCACTCTAAAAGCACTCGACACGTTTTCCCCCTTTTCCTGCTTGCTCTCT
TGCCTCGAAAGGCGGCCGGGATCGAGGCAGGGGACACTCTACGCCAGGTG
GACGAAGTGCGACTGGGCTCTTTGTCGTACGAAGACGGCGTGGAGTTGCT
AGAGAGGCGAAAGGGCGACGTTGTCCTCACCGCCGTTCGCCCAAACGGTA
AGCGTTGCAACTGCCGTCATTGAAGTATGCAGTCAAAGTGCATCGTACGG
GATCTGTGGGTGCCGTACTTGAGTGTAGACATCACAGAAGAACAGGCTAC
AAGCGACACTTGCCATTTTTATTTTATTTATTTTTTTAATTTCTTTATTT
TTTTATTCTTCACAATTATTGTCAGTGCTCGACGGGCTCCTTGCCACGAG
GGGGGGCATCTTGCCAAGAGTACTAAACCGTGGTCACCCACAGAAGGGTT
CCTCTCCCCGAGCCCCCCACTCCCACCTTATGCGGTGCTTGCCTTATACT
AGTATATATTTGTTTTTTCACAGAAGAACGAGGTTATGTAGCGACACTTT
GCTGTTGCCAGCATACAATTTTACGCAGGGCTTTGGAAAGCGTGAAGGAC
TGCATACAGCAGACGCGTTTTTTCATTCTGTTCCTTATTAAGAGTACGGT
ACGACTGAGCGGGGGGTAAACGGCCACCGCTCGGGCTTCACAGCGCTTGC
CTCAGACCCGCGAGGGACCGACCGGTGTCGGACGAAAATGCGCCCATCAG
AGGGTGTTTTCTGCTGGATGTGAGGCATGTTTTAGCCCTTCCCACCCGGG
GTACCAAGATAGGATGTTGGATGTTGTCCAGTTTCTGTTTTTACCTCACG
TGGCGTGTAGAGGGGGAGCGAAGGGCTCCAGACTATCTGCTGTGTCGTTT
CTTTTGTTTTTATGCTTTGCTGACCCTTCGGGCCCACCTTTTTATTGTTC
AGTATAGTAATATACCCTTTCTTAGGGTGAGTTAGCCTGTGACCACAGGA
ATCGACCGCGTCGAGTGTTTGATTAGTACGGACGTAAGGAGGTGCTGGTT
GGAGAGATCGGAGCGGTTTTTAATGTGAAGATAACATCAACAACCCTTCC
ATCGCCTCTCGCCGGACGACGTCAGCGCGTTTGCACGGTTTGTTTCCAGT
AGCGAAAAAATAGAGAGATTCGCTTTGGAGGGAAAACGACCCACCAACCC
TCCCGCATGTGTCCTGGCCGACGTGTGATCACCTACATACCTATGTACCT
GCCTTCATCGTCGTGACCCTTTTTTGGTTTCACCGACTACCCCATGCGTT
CCGTCTCGCAACCTTCATGTCTCTTTACTCTTACCAGCGCCCCTCGGCCC
CTCATCCCCATCCCCGAATGGTGACCACACGCCGGCGCCGTTCCATGCGG
AAGAGGACCGTTCCCCGCGCCGTTCGTCGGATCGTTCCTCGCGCCGTTCC
TCGAGACATTCTCCGGGCCGTTCCTCCGCTGCCGCGAACCGTTCCGCGAG
CCGTTCCCCGGACCGTTCCTCGCGCCGTTCCTCGAGACATTCCCCGGGCC
GTTCCTCCACCGCCGCCGCGAACCGTTCCGCGAGCCGTTCCCCGGATCGT
TCTCTCCGCCGCTTCTTGATGGACGACGCCTCGGGCGGGGGGCTTCCGCC
TTCGTACCCCGAGGCCAAGCTGATCTCCGAGCTGGAGAACCGCGCGAAGC
GAATCGCCGAGCTGGAAGAGCGCGTCGAGAGCGCCCTGTCGGCCGCGGCG
GAGCGGGCGACACAGTCCGCGGTTTTCGAGGAGCAGGCCCGGAAGGAGAA
GTCTCTCGCCGGGGCGAGGGCCAAGCAGATCGCGGAGCTGCTGGAGGCGC
GCGTCGAGAGCGCTTCGTCCTTGTCCTTGGCGGCGGACCGAGCGAAACAG
GTAGGTGCTTGGCTGCTGCTGCTAGGTGCTTGGCTGCTGCTGCTGCTGCT
GCTGCTGCCGCTGCTGCTGCTGGGGAGATGTGGCTGCTGTTGTTGTCTGT
TGACAGCAGGGTACTTAGCTCCCTCTGTGGCGTTTGGGTGCTCACGGGTT
TGCTGTCGAGTACCGCTGTAGTCAGCTGAGCAGACGAGGGGAGAAGGTTG
GGGAGGAGGAGGAGGAGGAGGAGGAGGCGCGTGAAAGATGTTCGAAGTGG
GAACCGAGAAGATATTGGAGTGCAGGGACTCGCACGACTCCCAGAGAGCC
TTGAAGGGACCGCCAGACGCCAGATGGCTCTTGAGACATCTTAGTAAGCA
CGTGTCCGGGTAGGAAGTTTCGGTGGGAGAGCGAGAGAAAGGTGTCAGCA
CCCGGGGGGAGGGGGTTCTGACGACCTTCGCCTCGTCTCTAGTAGAAGGC
CCACACGGCAGTCTATGCCGATGTACATTTGAATTTGCCGGCACGAGACT
TTGGGTGCTTTGCCCGAACATATTTATGTATTTATGTACATACACACATG
GCTAAAACTCATACAGGACAGGCAGCAGTGGTCCGATACCCCGCCCGCGG
CTGTCCGGGGGTGATATTTAACATTTAGCCGACTGCCAGATGCCCACGCA
ATCTCCCGAAGGCTGTTGCGGTATTACTCCTCCGGGTGGGCGTTTGCGTT
AGATAAACACCCATTGCAAGTACGCACAACAGATGAGGGTGTACACACAT
CATTATTGTTGTTGTTGTTGTTCGCATCAAAAACCGTTCCGATCTCTCCA
CCGAGTACCCCCTTATGCCCGTACAATCAACACTTGATGCGGTCAATCCC
CGTGGTCACAGGATAACTTGTACCTCAAAAAAGGTGTATGGTATACGAAA
ATAAAATGGACCGGAAAGGTCAGCAAAGTATGCATTCATTGTACATGCAT
ATTTATCTATGTGCGCAGGCTTGACATGTACTGGACGTTTCAAAATCTTT
TAACAGGGCGCCGCGGGGTCAGCTCCGACAAGGGGCAGCAAGGGGCCTGG
TCCTGCCGCCAGGCCCCCGTCGGCGCG back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig1271:13970..18746+ >mRNA_L-elsbetiae_contig1271.2177.1 ID=mRNA_L-elsbetiae_contig1271.2177.1|Name=mRNA_L-elsbetiae_contig1271.2177.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1986bp|location=Sequence derived from alignment at L-elsbetiae_contig1271:13970..18746+ (Laminarionema elsbetiae ELsaHSoW15) GAGGGCAAAGCCGGCGCAGGTACTCAGCCCGTCTGCGGGCTTGGTGCCTC AACGACGGCAAGCCTCGAACCCCACCCGGAGGGCAAAGCCGGCGCAGGTA CTCAGCCCGTCTGCGGGCTTGGTGCCTCAACGACGGCAAGCCTCGAACCC CACCCGCGGAAGGCTAACACCCACGAGGTTACGGTTACGCCGAAGGTCGG GGCCAGCGGGCTGGGGCTGATCCTCGGGAAGGAGAAGGAGGGTGCCGGTT GGGTTGTCGAGGGCTTCCGGCCCATGCCGGGCGGAGAGCGGAACCCTGCG AAGCGGAAGGCTAACACCCACGAGGTTACGGTTACGCCGAAGGTCGGGGC CAGCGGGCTGGGGCTGATCCTCGGGAAGGAGAAGGAGGGTGCCGGTTGGG TTGTCGAGGGCTTCCGGCCCATGCCGGGCGGAGAGCGGAACCCTGCGAAG GCGGCCGGGATCGAGGCAGGGGACACTCTACGCCAGGTGGACGAAGTGCG ACTGGGCTCTTTGTCGTACGAAGACGGCGTGGAGTTGCTAGAGAGGCGAA AGGGCGACGTTGTCCTCACCGCCGTTCGCCCAAACGGCGGCCGGGATCGA GGCAGGGGACACTCTACGCCAGGTGGACGAAGTGCGACTGGGCTCTTTGT CGTACGAAGACGGCGTGGAGTTGCTAGAGAGGCGAAAGGGCGACGTTGTC CTCACCGCCGTTCGCCCAAACGCGCCCCTCGGCCCCTCATCCCCATCCCC GAATGGTGACCACACGCCGGCGCCGTTCCATGCGGAAGAGGACCGTTCCC CGCGCCGTTCGTCGGATCGTTCCTCGCGCCGTTCCTCGAGACATTCTCCG GGCCGTTCCTCCGCTGCCGCGAACCGTTCCGCGAGCCGTTCCCCGGACCG TTCCTCGCGCCGTTCCTCGAGACATTCCCCGGGCCGTTCCTCCACCGCCG CCGCGAACCGTTCCGCGAGCCGTTCCCCGGATCGTTCTCTCCGCCGCTTC TTGATGGACGACGCCTCGGGCGGGGGGCTTCCGCCTTCGTACCCCGAGGC CAAGCTGATCTCCGAGCTGGAGAACCGCGCGAAGCGAATCGCCGAGCTGG AAGAGCGCGTCGAGAGCGCCCTGTCGGCCGCGGCGGAGCGGGCGACACAG TCCGCGGTTTTCGAGGAGCAGGCCCGGAAGGAGAAGTCTCTCGCCGGGGC GAGGGCCAAGCAGATCGCGGAGCTGCTGGAGGCGCGCGTCGAGAGCGCTT CGTCCTTGTCCTTGGCGGCGGACCGAGCGAAACAGCGCCCCTCGGCCCCT CATCCCCATCCCCGAATGGTGACCACACGCCGGCGCCGTTCCATGCGGAA GAGGACCGTTCCCCGCGCCGTTCGTCGGATCGTTCCTCGCGCCGTTCCTC GAGACATTCTCCGGGCCGTTCCTCCGCTGCCGCGAACCGTTCCGCGAGCC GTTCCCCGGACCGTTCCTCGCGCCGTTCCTCGAGACATTCCCCGGGCCGT TCCTCCACCGCCGCCGCGAACCGTTCCGCGAGCCGTTCCCCGGATCGTTC TCTCCGCCGCTTCTTGATGGACGACGCCTCGGGCGGGGGGCTTCCGCCTT CGTACCCCGAGGCCAAGCTGATCTCCGAGCTGGAGAACCGCGCGAAGCGA ATCGCCGAGCTGGAAGAGCGCGTCGAGAGCGCCCTGTCGGCCGCGGCGGA GCGGGCGACACAGTCCGCGGTTTTCGAGGAGCAGGCCCGGAAGGAGAAGT CTCTCGCCGGGGCGAGGGCCAAGCAGATCGCGGAGCTGCTGGAGGCGCGC GTCGAGAGCGCTTCGTCCTTGTCCTTGGCGGCGGACCGAGCGAAACAGGG CGCCGCGGGGTCAGCTCCGACAAGGGGCAGCAAGGGGCCTGGTCCTGCCG CCAGGCCCCCGTCGGCGGGCGCCGCGGGGTCAGCTCCGACAAGGGGCAGC AAGGGGCCTGGTCCTGCCGCCAGGCCCCCGTCGGCG back to top
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