prot_L-elsbetiae_contig1271.2177.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1271.2177.1
Unique Nameprot_L-elsbetiae_contig1271.2177.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length331
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1271.2177.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 229..256
NoneNo IPR availableGENE3D2.30.42.10coord: 17..122
e-value: 4.0E-8
score: 35.0
IPR001478PDZ domainPROSITEPS50106PDZcoord: 33..120
score: 10.978
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 30..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1271contigL-elsbetiae_contig1271:13970..18744 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1271.2177.1mRNA_L-elsbetiae_contig1271.2177.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1271 13970..18746 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1271.2177.1 ID=prot_L-elsbetiae_contig1271.2177.1|Name=mRNA_L-elsbetiae_contig1271.2177.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=331bp
EGKAGAGTQPVCGLGASTTASLEPHPRKANTHEVTVTPKVGASGLGLILG
KEKEGAGWVVEGFRPMPGGERNPAKAAGIEAGDTLRQVDEVRLGSLSYED
GVELLERRKGDVVLTAVRPNAPLGPSSPSPNGDHTPAPFHAEEDRSPRRS
SDRSSRRSSRHSPGRSSAAANRSASRSPDRSSRRSSRHSPGRSSTAAANR
SASRSPDRSLRRFLMDDASGGGLPPSYPEAKLISELENRAKRIAELEERV
ESALSAAAERATQSAVFEEQARKEKSLAGARAKQIAELLEARVESASSLS
LAADRAKQGAAGSAPTRGSKGPGPAARPPSA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001478PDZ
IPR036034PDZ_sf