mRNA_H-elongata_contig56015.13033.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig56015.13033.1 vs. uniprot
Match: D7G5S7_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5S7_ECTSI) HSP 1 Score: 90.5 bits (223), Expect = 1.170e-19 Identity = 42/65 (64.62%), Postives = 54/65 (83.08%), Query Frame = 1
Query: 4 NINERGMWGNTPLLVATQYGHANVALALLKCGADARAENERRATALHYSCAEGVIDVCRALLDNG 198
+++ERGMWGNTPL+VATQY H ++ALAL+ GA+ ENER+ATALH+SCAEG + V ALL+NG
Sbjct: 160 DLDERGMWGNTPLIVATQYAHPDIALALIAGGANVTLENERQATALHFSCAEGSVGVVSALLNNG 224
BLAST of mRNA_H-elongata_contig56015.13033.1 vs. uniprot
Match: A0A6H5JYM2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYM2_9PHAE) HSP 1 Score: 89.0 bits (219), Expect = 4.060e-19 Identity = 41/65 (63.08%), Postives = 54/65 (83.08%), Query Frame = 1
Query: 4 NINERGMWGNTPLLVATQYGHANVALALLKCGADARAENERRATALHYSCAEGVIDVCRALLDNG 198
+++ERGMWGNTPL+VATQY H ++ALAL+ GA+ ENER+ATALH+SCAEG + V ALL++G
Sbjct: 160 DLDERGMWGNTPLIVATQYAHPDIALALIAGGANVTLENERQATALHFSCAEGSVGVASALLNSG 224
BLAST of mRNA_H-elongata_contig56015.13033.1 vs. uniprot
Match: A0A813HQJ1_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813HQJ1_POLGL) HSP 1 Score: 65.9 bits (159), Expect = 7.980e-12 Identity = 32/62 (51.61%), Postives = 39/62 (62.90%), Query Frame = 1
Query: 7 INERGMWGNTPLLVATQYGHANVALALLKCGADARAENERRATALHYSCAEGVIDVCRALLD 192
+ + GMW NTPLL A YGHA AL L+ GA+ A NE AT LHY+ EG + V ALL+
Sbjct: 100 LEDLGMWDNTPLLAACNYGHAEAALRLIAAGANVCARNEHNATPLHYAAVEGSLPVVAALLE 161
BLAST of mRNA_H-elongata_contig56015.13033.1 vs. uniprot
Match: W4GX04_9STRA (Uncharacterized protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GX04_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 8.120e-9 Identity = 31/61 (50.82%), Postives = 41/61 (67.21%), Query Frame = 1
Query: 7 INERGMWGNTPLLVATQYGHANVALALLKCGADARAENERRATALHYSCAEGVIDVCRALL 189
+N RGMW +TPLLVA QY H++VAL LL GADA NE+ +A+ + EG+ +V LL
Sbjct: 104 LNCRGMWDSTPLLVACQYAHSDVALHLLSVGADATLVNEKHVSAVLLASLEGLTEVLTCLL 164
BLAST of mRNA_H-elongata_contig56015.13033.1 vs. uniprot
Match: A0A7S2H0N5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H0N5_9STRA) HSP 1 Score: 56.6 bits (135), Expect = 9.830e-8 Identity = 30/61 (49.18%), Postives = 41/61 (67.21%), Query Frame = 1
Query: 7 INERGMWGNTPLLVATQYGHANVALALLKCGADARAENERRATALHYSCAEGVIDVCRALL 189
IN R G TPLL+A QYGHA++A L+K GAD A + +R +ALH++ +G + VC LL
Sbjct: 297 INARDKSGCTPLLIAAQYGHADLAAFLIKRGADLNAVDFQRDSALHWAAYKGSVPVCGLLL 357
BLAST of mRNA_H-elongata_contig56015.13033.1 vs. uniprot
Match: B8BZT9_THAPS (Palmitoyltransferase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZT9_THAPS) HSP 1 Score: 50.4 bits (119), Expect = 1.490e-5 Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 1
Query: 1 VNINERGMWGNTPLLVATQYGHANVALALLKCGADARAENERRATALHYSCAEGVIDVCRALLD 192
V I+ + G TPLL+A QYGH ++A L++ GADA A + R TALH++ +G ++ LD
Sbjct: 334 VGIDAKDSSGCTPLLIAAQYGHPDLAAFLIQRGADATAVDSSRDTALHWAAYKGSVEGVEGHLD 397
BLAST of mRNA_H-elongata_contig56015.13033.1 vs. uniprot
Match: A0A1F7ZV41_9EURO (Protein kinase domain-containing protein n=1 Tax=Aspergillus bombycis TaxID=109264 RepID=A0A1F7ZV41_9EURO) HSP 1 Score: 49.7 bits (117), Expect = 2.810e-5 Identity = 29/69 (42.03%), Postives = 43/69 (62.32%), Query Frame = 1
Query: 1 VNINERGMWGNTPLLVATQYGHANVALALLKCGADARAENERRATALHYSCA--EGVID-VCRALLDNG 198
+NINE+G+ G TPLL+A + GH + ALL GADA+ ++ T LH+ E +D V +AL+ +G
Sbjct: 533 LNINEKGLLGETPLLLACRNGHLSTVQALLDLGADAKLSDDYGTTPLHWLSRFHESEVDIVVKALIQHG 601
BLAST of mRNA_H-elongata_contig56015.13033.1 vs. uniprot
Match: UPI001EB08346 (serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A-like n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EB08346) HSP 1 Score: 49.3 bits (116), Expect = 3.810e-5 Identity = 25/62 (40.32%), Postives = 37/62 (59.68%), Query Frame = 1
Query: 4 NINERGMWGNTPLLVATQYGHANVALALLKCGADARAENERRATALHYSCAEGVIDVCRALL 189
NIN RG +G TPL++A + GH V L++ GAD ++ R LH +C G ID+ + +L
Sbjct: 255 NINSRGQYGRTPLMMAAKKGHRQVFDLLVREGADVSLVDDNRDNILHVACLGGHIDMVKYVL 316
BLAST of mRNA_H-elongata_contig56015.13033.1 vs. uniprot
Match: UPI001EE54BD6 (serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE54BD6) HSP 1 Score: 48.5 bits (114), Expect = 7.210e-5 Identity = 25/62 (40.32%), Postives = 37/62 (59.68%), Query Frame = 1
Query: 4 NINERGMWGNTPLLVATQYGHANVALALLKCGADARAENERRATALHYSCAEGVIDVCRALL 189
NIN RG +G TP++VA + GH V L+K GAD ++ R LH +C G +D+ + +L
Sbjct: 1318 NINSRGQYGRTPVMVAAKRGHREVFDLLVKEGADVSLVDDDRDYLLHVACIGGHVDMVKYVL 1379
BLAST of mRNA_H-elongata_contig56015.13033.1 vs. uniprot
Match: UPI00201EC82C (uncharacterized protein LOC124152553 n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201EC82C) HSP 1 Score: 48.5 bits (114), Expect = 7.240e-5 Identity = 25/62 (40.32%), Postives = 37/62 (59.68%), Query Frame = 1
Query: 4 NINERGMWGNTPLLVATQYGHANVALALLKCGADARAENERRATALHYSCAEGVIDVCRALL 189
+IN RG +G TPL+VA + GH V L++ GAD ++ R LH +C G +DV + +L
Sbjct: 1597 DINSRGRYGRTPLMVAAENGHRQVFDLLVREGADVTLVDDGRNNILHVACLGGHVDVVKYVL 1658 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig56015.13033.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig56015.13033.1 >prot_H-elongata_contig56015.13033.1 ID=prot_H-elongata_contig56015.13033.1|Name=mRNA_H-elongata_contig56015.13033.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=59bp MWGNTPLLVATQYGHANVALALLKCGADARAENERRATALHYSCAEGVIDback to top mRNA from alignment at H-elongata_contig56015:1544..1741+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig56015.13033.1 ID=mRNA_H-elongata_contig56015.13033.1|Name=mRNA_H-elongata_contig56015.13033.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=198bp|location=Sequence derived from alignment at H-elongata_contig56015:1544..1741+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig56015:1544..1741+ >mRNA_H-elongata_contig56015.13033.1 ID=mRNA_H-elongata_contig56015.13033.1|Name=mRNA_H-elongata_contig56015.13033.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=354bp|location=Sequence derived from alignment at H-elongata_contig56015:1544..1741+ (Himanthalia elongata Himel1 dioecious)back to top |