prot_H-elongata_contig56015.13033.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig56015.13033.1
Unique Nameprot_H-elongata_contig56015.13033.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length59
Homology
BLAST of mRNA_H-elongata_contig56015.13033.1 vs. uniprot
Match: D7G5S7_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5S7_ECTSI)

HSP 1 Score: 82.8 bits (203), Expect = 4.410e-17
Identity = 39/59 (66.10%), Postives = 48/59 (81.36%), Query Frame = 0
Query:    1 MWGNTPLLVATQYGHANVALALLKCGADARAENERRATALHYSCAEGVIDVCRALLDNG 59
            MWGNTPL+VATQY H ++ALAL+  GA+   ENER+ATALH+SCAEG + V  ALL+NG
Sbjct:  166 MWGNTPLIVATQYAHPDIALALIAGGANVTLENERQATALHFSCAEGSVGVVSALLNNG 224          
BLAST of mRNA_H-elongata_contig56015.13033.1 vs. uniprot
Match: A0A6H5JYM2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYM2_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 1.540e-16
Identity = 38/59 (64.41%), Postives = 48/59 (81.36%), Query Frame = 0
Query:    1 MWGNTPLLVATQYGHANVALALLKCGADARAENERRATALHYSCAEGVIDVCRALLDNG 59
            MWGNTPL+VATQY H ++ALAL+  GA+   ENER+ATALH+SCAEG + V  ALL++G
Sbjct:  166 MWGNTPLIVATQYAHPDIALALIAGGANVTLENERQATALHFSCAEGSVGVASALLNSG 224          
BLAST of mRNA_H-elongata_contig56015.13033.1 vs. uniprot
Match: W4GX04_9STRA (Uncharacterized protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GX04_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 6.610e-7
Identity = 28/56 (50.00%), Postives = 37/56 (66.07%), Query Frame = 0
Query:    1 MWGNTPLLVATQYGHANVALALLKCGADARAENERRATALHYSCAEGVIDVCRALL 56
            MW +TPLLVA QY H++VAL LL  GADA   NE+  +A+  +  EG+ +V   LL
Sbjct:  109 MWDSTPLLVACQYAHSDVALHLLSVGADATLVNEKHVSAVLLASLEGLTEVLTCLL 164          
BLAST of mRNA_H-elongata_contig56015.13033.1 vs. uniprot
Match: A0A7S2H0N5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H0N5_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 1.230e-6
Identity = 27/54 (50.00%), Postives = 38/54 (70.37%), Query Frame = 0
Query:    3 GNTPLLVATQYGHANVALALLKCGADARAENERRATALHYSCAEGVIDVCRALL 56
            G TPLL+A QYGHA++A  L+K GAD  A + +R +ALH++  +G + VC  LL
Sbjct:  304 GCTPLLIAAQYGHADLAAFLIKRGADLNAVDFQRDSALHWAAYKGSVPVCGLLL 357          
BLAST of mRNA_H-elongata_contig56015.13033.1 vs. uniprot
Match: B8BZT9_THAPS (Palmitoyltransferase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZT9_THAPS)

HSP 1 Score: 48.5 bits (114), Expect = 5.330e-5
Identity = 25/55 (45.45%), Postives = 36/55 (65.45%), Query Frame = 0
Query:    3 GNTPLLVATQYGHANVALALLKCGADARAENERRATALHYSCAEGVIDVCRALLD 57
            G TPLL+A QYGH ++A  L++ GADA A +  R TALH++  +G ++     LD
Sbjct:  343 GCTPLLIAAQYGHPDLAAFLIQRGADATAVDSSRDTALHWAAYKGSVEGVEGHLD 397          
BLAST of mRNA_H-elongata_contig56015.13033.1 vs. uniprot
Match: A0A7S2XU17_9STRA (Palmitoyltransferase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XU17_9STRA)

HSP 1 Score: 48.1 bits (113), Expect = 7.230e-5
Identity = 25/54 (46.30%), Postives = 36/54 (66.67%), Query Frame = 0
Query:    3 GNTPLLVATQYGHANVALALLKCGADARAENERRATALHYSCAEGVIDVCRALL 56
            G TPLL+A QYGHA++A  L++ GAD    +  + TALH++  +G + VC  LL
Sbjct:  198 GCTPLLIAAQYGHADLAAFLVQQGADISHLDTSQDTALHWAAYKGSVPVCGLLL 251          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig56015.13033.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G5S7_ECTSI4.410e-1766.10Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
A0A6H5JYM2_9PHAE1.540e-1664.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W4GX04_9STRA6.610e-750.00Uncharacterized protein n=9 Tax=Aphanomyces astaci... [more]
A0A7S2H0N5_9STRA1.230e-650.00Hypothetical protein (Fragment) n=1 Tax=Helicothec... [more]
B8BZT9_THAPS5.330e-545.45Palmitoyltransferase n=1 Tax=Thalassiosira pseudon... [more]
A0A7S2XU17_9STRA7.230e-546.30Palmitoyltransferase n=1 Tax=Attheya septentrional... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 35..59
e-value: 340.0
score: 8.5
coord: 2..31
e-value: 0.17
score: 21.0
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 3..29
e-value: 0.0011
score: 19.3
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 2..34
score: 11.06
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 35..59
score: 8.816
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..59
e-value: 3.8E-15
score: 57.6
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 2..59
NoneNo IPR availablePANTHERPTHR24180:SF1526S PROTEASOME REGULATORY SUBUNIT P28-RELATEDcoord: 2..59
NoneNo IPR availablePANTHERPTHR24180FAMILY NOT NAMEDcoord: 2..59
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 2..59
score: 18.378

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig56015contigH-elongata_contig56015:1565..1741 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig56015.13033.1mRNA_H-elongata_contig56015.13033.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig56015 1544..1741 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig56015.13033.1 ID=prot_H-elongata_contig56015.13033.1|Name=mRNA_H-elongata_contig56015.13033.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=59bp
MWGNTPLLVATQYGHANVALALLKCGADARAENERRATALHYSCAEGVID
VCRALLDNG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom