prot_H-elongata_contig71815.14855.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig71815.14855.1 vs. uniprot
Match: A0A438CJM8_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438CJM8_VITVI) HSP 1 Score: 102 bits (254), Expect = 4.470e-24 Identity = 49/114 (42.98%), Postives = 76/114 (66.67%), Query Frame = 0
Query: 1 MDGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTSAQASIRMVLSMIAALGWEARQVDVDMTYLEADVEKEIYAELPEAYRDS 114
M+ + GVW +VE P G +G + VFK K D G IE+YK RLVA+GF Q +GI Y+E+ SP S + S+R++++++A E +Q+DV MT+L ++E+E+Y + PE + S
Sbjct: 5 MNSMASNGVWNLVELPNGAKAIGCKWVFKTKKDSLGNIERYKARLVAKGFTQNEGIDYKETFSPVSKKDSLRVIMTLVAHFDLELQQMDVKMTFLNGNLEEEVYMKQPEGFSSS 118
BLAST of mRNA_H-elongata_contig71815.14855.1 vs. uniprot
Match: A0A2I0JN73_PUNGR (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Punica granatum TaxID=22663 RepID=A0A2I0JN73_PUNGR) HSP 1 Score: 94.7 bits (234), Expect = 8.940e-23 Identity = 42/109 (38.53%), Postives = 71/109 (65.14%), Query Frame = 0
Query: 5 TARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTSAQASIRMVLSMIAALGWEARQVDVDMTYLEADVEKEIYAELPEAYRD 113
T GVW +V+ P+G +G + V+K K D +E+YK RLVA+GF Q +GI Y E+ SP S + S+R++++++A + E Q+DV +L D+++E+Y + P+ + D
Sbjct: 2 TKNGVWDLVKLPEGAVAIGCKWVYKTKRDASSNVERYKARLVAEGFTQKEGIDYHETFSPVSKKDSLRIIMALVAHMDLELHQMDVKTAFLNGDLDEEVYMKQPKGFND 110
BLAST of mRNA_H-elongata_contig71815.14855.1 vs. uniprot
Match: A0A438GTP0_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438GTP0_VITVI) HSP 1 Score: 101 bits (252), Expect = 1.100e-22 Identity = 49/114 (42.98%), Postives = 76/114 (66.67%), Query Frame = 0
Query: 1 MDGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTSAQASIRMVLSMIAALGWEARQVDVDMTYLEADVEKEIYAELPEAYRDS 114
M+ + GVW +VE P G +G + VFK K D G IE+YK RLVA+GF Q +GI Y+E+ SP S + S+R++++++A E +Q+DV MT+L ++E+E+Y + PE + S
Sbjct: 343 MNSMASNGVWNLVELPNGAKSIGCKWVFKTKKDSLGNIERYKARLVAKGFTQNEGIDYKETFSPVSKKDSLRVIMTLVAHFDLELQQMDVKMTFLNGNLEEEVYMKQPEGFSSS 456
BLAST of mRNA_H-elongata_contig71815.14855.1 vs. uniprot
Match: A0A151RVY4_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151RVY4_CAJCA) HSP 1 Score: 97.8 bits (242), Expect = 1.810e-22 Identity = 48/114 (42.11%), Postives = 74/114 (64.91%), Query Frame = 0
Query: 1 MDGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTSAQASIRMVLSMIAALGWEARQVDVDMTYLEADVEKEIYAELPEAYRDS 114
M+ T+ VW +VE P G +G R VFK K D G IE++K RLVA+GF Q +GI Y E+ SP S + S+R++++++A +E Q+DV T+L ++E+E+Y + PE + S
Sbjct: 17 MNSMTSNQVWDLVELPHGVKSIGCRWVFKTKKDSQGNIERHKARLVAKGFTQREGIDYSETFSPVSKKDSLRIIMALVAHFDFELHQMDVKTTFLNGNLEEEVYMKQPEGFFSS 130
BLAST of mRNA_H-elongata_contig71815.14855.1 vs. uniprot
Match: A0A438E4T4_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=6 Tax=Vitis vinifera TaxID=29760 RepID=A0A438E4T4_VITVI) HSP 1 Score: 100 bits (250), Expect = 2.490e-22 Identity = 46/107 (42.99%), Postives = 72/107 (67.29%), Query Frame = 0
Query: 10 WQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTSAQASIRMVLSMIAALGWEARQVDVDMTYLEADVEKEIYAELPEAYRDSRK 116
W+VV+ P K +G + ++K K + DG IE+YK RLVAQGF Q++GI Y+E SP + S+R L+++ A WE Q+DV+ +L D+E+E+Y +LPE ++ + K
Sbjct: 582 WKVVDLPPEKKAIGCKWIYKIKYNADGSIERYKARLVAQGFTQIEGIDYQEMFSPVAKMTSVRWFLAVVVAKRWELHQMDVNNAFLHGDLEEEVYMKLPEGFKATGK 688
BLAST of mRNA_H-elongata_contig71815.14855.1 vs. uniprot
Match: A0A438DMQ7_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438DMQ7_VITVI) HSP 1 Score: 97.8 bits (242), Expect = 2.610e-22 Identity = 48/118 (40.68%), Postives = 73/118 (61.86%), Query Frame = 0
Query: 1 MDGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTSAQASIRMVLSMIAALGWEARQVDVDMTYLEADVEKEIYAELPEAYRDSRKQI 118
M VW +VE P G +G + VFK K D G IE+YK RLVA+GF Q +GI Y E+ SP S + S+R++L+++A E +Q+DV T+L ++E+E+Y + PE + S + +
Sbjct: 17 MSSMKCNDVWDLVELPNGAKTIGCKWVFKTKKDSLGNIERYKARLVAKGFTQKEGIDYTETFSPVSKKDSLRIILALVAHFDLELQQMDVKTTFLNGELEEEVYMKQPEGFPSSDENV 134
BLAST of mRNA_H-elongata_contig71815.14855.1 vs. uniprot
Match: A0A2K3JLR7_TRIPR (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3JLR7_TRIPR) HSP 1 Score: 94.0 bits (232), Expect = 3.360e-22 Identity = 42/103 (40.78%), Postives = 67/103 (65.05%), Query Frame = 0
Query: 10 WQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTSAQASIRMVLSMIAALGWEARQVDVDMTYLEADVEKEIYAELPEAYR 112
W V+ P GK ++G R V+K K G +EKYK RLVA+GF Q++G + E+ +P + ++R +LS+ A GWE Q+DV +L D+E+E+Y ++P+ Y+
Sbjct: 14 WDVMLPPVGKKIVGCRWVYKVKYKASGEVEKYKARLVAKGFTQIEGEDFNETFAPVAKMTTVRCLLSVAVAKGWELHQMDVSNAFLHGDLEEEVYMQVPDGYQ 116
BLAST of mRNA_H-elongata_contig71815.14855.1 vs. uniprot
Match: A0A0C2WN23_AMAMK (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WN23_AMAMK) HSP 1 Score: 100 bits (249), Expect = 3.460e-22 Identity = 48/114 (42.11%), Postives = 76/114 (66.67%), Query Frame = 0
Query: 8 GVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTSAQASIRMVLSMIAALGWEARQVDVDMTYLEADVEKEIYAELPEAYRDSRKQIGLL 121
GV++ V RP+ + ++G++ VFK K DG++EKYK RLVAQGF QV+GI Y E+ +P + SIR++L++ A WE Q+DV +L ++E+EIY ++P ++ S + L
Sbjct: 1025 GVFEEVPRPRDRKIIGSKWVFKTKTGPDGQVEKYKARLVAQGFSQVEGIDYNETFAPVTKSNSIRLLLALAARHDWEIHQMDVKSAFLNGELEEEIYMKVPPGHKASADAVWRL 1138
BLAST of mRNA_H-elongata_contig71815.14855.1 vs. uniprot
Match: A0A438GNV2_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438GNV2_VITVI) HSP 1 Score: 100 bits (248), Expect = 4.210e-22 Identity = 46/107 (42.99%), Postives = 72/107 (67.29%), Query Frame = 0
Query: 10 WQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTSAQASIRMVLSMIAALGWEARQVDVDMTYLEADVEKEIYAELPEAYRDSRK 116
W+VV+ P K +G + ++K K + DG IE+YK RLVAQGF Q++GI Y+E+ SP + S+R L++ A WE Q+DV+ +L D+E+E+Y +LPE ++ + K
Sbjct: 113 WKVVDLPPEKKAIGCKWIYKIKYNADGSIERYKARLVAQGFTQIEGIDYQETFSPVAKMTSVRCFLAIAVAKRWELHQMDVNNAFLHGDLEEEVYMKLPEGFKATGK 219
BLAST of mRNA_H-elongata_contig71815.14855.1 vs. uniprot
Match: A0A0A9Y7J8_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9Y7J8_LYGHE) HSP 1 Score: 94.4 bits (233), Expect = 8.060e-22 Identity = 44/99 (44.44%), Postives = 67/99 (67.68%), Query Frame = 0
Query: 10 WQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTSAQASIRMVLSMIAALGWEARQVDVDMTYLEADVEKEIYAELP 108
W +V+RP+GKTV+G+R VF+ K+ DG +E+ K RLVA+GF Q+ G HY E+ + + +SIR V+++ A E Q+D YL ++E+EIY E+P
Sbjct: 49 WTLVDRPEGKTVVGSRWVFRTKLKADGTVERRKARLVAKGFTQIPGTHYNETYTSVARLSSIRFVIALAAERNLELEQLDFTCAYLNGEIEEEIYMEVP 147 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig71815.14855.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig71815.14855.1 ID=prot_H-elongata_contig71815.14855.1|Name=mRNA_H-elongata_contig71815.14855.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=122bpback to top |