mRNA_H-elongata_contig71815.14855.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig71815.14855.1
Unique NamemRNA_H-elongata_contig71815.14855.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig71815.14855.1 vs. uniprot
Match: A0A151RVY4_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151RVY4_CAJCA)

HSP 1 Score: 140 bits (352), Expect = 2.540e-37
Identity = 81/223 (36.32%), Postives = 127/223 (56.95%), Query Frame = 1
Query:    7 AIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTSAQASIRMVLSMIAALGWEARQVDVDMTYLEADVEKEIYAELPEAY--RDSRKQIGLL*KAMYGLVHAGLLW*KKFGIELEANGFQRSQADPCVFRRVLHGVVVXXXXXXXXXLLVASATKRDEEQAVRDLCSCFPIKDLGEASYYLGCHITR 669
            A+  EM+  T+  VW +VE P G   +G R VFK K D  G IE++K RLVA+GF Q +GI Y E+ SP S + S+R++++++A   +E  Q+DV  T+L  ++E+E+Y + PE +   D    +  L K++YGL  A   W  KF   + + GF+ +  D CV+++V  G  +         +L+A+  K    +  + L   F +KD+GEASY +G  I R
Sbjct:   12 AMKEEMNSMTSNQVWDLVELPHGVKSIGCRWVFKTKKDSQGNIERHKARLVAKGFTQREGIDYSETFSPVSKKDSLRIIMALVAHFDFELHQMDVKTTFLNGNLEEEVYMKQPEGFFSSDGEHLVCKLNKSIYGLKQASRQWYLKFHEVVSSFGFEENIMDQCVYQKV-SGSKICFLVLYVDDILLATNDKGMLYEVKQFLSKNFDMKDMGEASYVIGIKIHR 233          
BLAST of mRNA_H-elongata_contig71815.14855.1 vs. uniprot
Match: A0A0C2WN23_AMAMK (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WN23_AMAMK)

HSP 1 Score: 147 bits (371), Expect = 5.200e-37
Identity = 87/230 (37.83%), Postives = 128/230 (55.65%), Query Frame = 1
Query:    1 KRAIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTSAQASIRMVLSMIAALGWEARQVDVDMTYLEADVEKEIYAELPEAYRDSRKQIGLL*KAMYGLVHAGLLW*KKFGIELEANGFQRSQADPCVFRRVLH------GVVVXXXXXXXXXLLVASATKRDEEQAVRDLCSCFPIKDLGEASYYLGCHITRN 672
            ++A   E++     GV++ V RP+ + ++G++ VFK K   DG++EKYK RLVAQGF QV+GI Y E+ +P +   SIR++L++ A   WE  Q+DV   +L  ++E+EIY ++P  ++ S   +  L KA+YGL  A   W KK   EL+  GF R QAD CVF + +        V V         L + + TK D       L S F + DLGE  + L   +TRN
Sbjct: 1011 RKACEAELEMFKQLGVFEEVPRPRDRKIIGSKWVFKTKTGPDGQVEKYKARLVAQGFSQVEGIDYNETFAPVTKSNSIRLLLALAARHDWEIHQMDVKSAFLNGELEEEIYMKVPPGHKASADAVWRLKKALYGLKQASREWYKKLSAELKTLGFTRLQADHCVFYKNMDRHPPIIAVYVDDNMVLSDSLDLVTKTKSD-------LGSRFDMTDLGEVCWILNMEVTRN 1233          
BLAST of mRNA_H-elongata_contig71815.14855.1 vs. uniprot
Match: A0A0C3AKI0_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C3AKI0_9AGAM)

HSP 1 Score: 142 bits (357), Expect = 3.860e-35
Identity = 74/210 (35.24%), Postives = 114/210 (54.29%), Query Frame = 1
Query:   43 GVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTSAQASIRMVLSMIAALGWEARQVDVDMTYLEADVEKEIYAELPEAYRDSRKQIGLL*KAMYGLVHAGLLW*KKFGIELEANGFQRSQADPCVFRRVLHGVVVXXXXXXXXXLLVASATKRDEEQAVRDLCSCFPIKDLGEASYYLGCHITRN 672
            G W++ E  + + ++G+R VF +K D+ G++ +YK RLVAQGF Q+ G+ Y ++ SP     ++R  +++ A   WE RQ+D+   YL  ++E+EI+ E PE + D   ++  L   +YGL  AG +W KK   +L   GF R+ ADPCV+     G +          +L   +  R +   V  L   F +KDLGE    LG  I RN
Sbjct:  885 GTWELDEPDEERKLVGSRWVFAKKYDEHGKVNQYKARLVAQGFSQIPGVDYTDNYSPVVRLDAVRACIALSAIKDWEMRQIDIKGAYLNGELEEEIFMEQPEGFNDGSGRVCRLKLPLYGLKQAGRMWNKKLNAQLTTLGFNRTNADPCVYYNNQDGKITILTVWVDDIILCGDSESRIDT-TVSALKKIFEVKDLGEPKLLLGIQIIRN 1093          
BLAST of mRNA_H-elongata_contig71815.14855.1 vs. uniprot
Match: A0A182GIT5_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GIT5_AEDAL)

HSP 1 Score: 139 bits (351), Expect = 4.210e-35
Identity = 77/225 (34.22%), Postives = 123/225 (54.67%), Query Frame = 1
Query:    1 KRAIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTSAQASIRMVLSMIAALGWEARQVDVDMTYLEADVEKEIYAELPEAYRD-SRKQIGLL*KAMYGLVHAGLLW*KKFGIELEANGFQRSQADPCVFRRVLHGVVVXXXXXXXXXLLVASATKRDEEQAVRDLCSCFPIKDLGEASYYLGCHITRN 672
            K A+  EM      G WQ+ + P G+  +G + +FKRK+D+DG + +YK RLVAQGF Q  G  Y+E  +P   Q + R++L++ +  G   +  DV   YL  ++E+ I+   P  Y D +R  +  L K++YGL  AG +W KKF   L+   FQ+S+ DPC++ R  +G            +++A     + E+ ++ L   F +  LG+ S++LG  I RN
Sbjct:   10 KAAMDDEMTSLRENGTWQLTDLPPGRKAVGCKWIFKRKLDEDGNVVRYKARLVAQGFTQKFGTDYDEVFAPVVRQVTFRVLLTVASQRGMVVKHADVKTAYLNGELEESIFMRQPPGYEDENRDAVCSLQKSLYGLKQAGYVWNKKFDQVLKRMKFQQSKNDPCLYVR-RNGKGYTYLVIYVDDMVIACNDDEEYEEIIKTLNRHFKVTSLGDISHFLGIKINRN 233          
BLAST of mRNA_H-elongata_contig71815.14855.1 vs. uniprot
Match: A0A438GNV2_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438GNV2_VITVI)

HSP 1 Score: 138 bits (348), Expect = 2.380e-34
Identity = 80/224 (35.71%), Postives = 125/224 (55.80%), Query Frame = 1
Query:    1 KRAIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTSAQASIRMVLSMIAALGWEARQVDVDMTYLEADVEKEIYAELPEAYRDSRK-QIGLL*KAMYGLVHAGLLW*KKFGIELEANGFQRSQADPCVFRRVLHGVVVXXXXXXXXXLLVASATKRDEEQAVRDLCSCFPIKDLGEASYYLGCHITR 669
            + A+A+E++       W+VV+ P  K  +G + ++K K + DG IE+YK RLVAQGF Q++GI Y+E+ SP +   S+R  L++  A  WE  Q+DV+  +L  D+E+E+Y +LPE ++ + K ++  L K++YGL  A   W  K    L+  GFQ+S AD  +F     G +V         L++A    +  E     L   F IK+LG+  Y LG  + R
Sbjct:   97 REAMAKEIEALETNQTWKVVDLPPEKKAIGCKWIYKIKYNADGSIERYKARLVAQGFTQIEGIDYQETFSPVAKMTSVRCFLAIAVAKRWELHQMDVNNAFLHGDLEEEVYMKLPEGFKATGKNKVCKLQKSLYGLKQASRQWFAKLMTALKEYGFQQSLADYSLFT-YRRGNIVMNLLVYVDDLILAGNDNKVCEAFKNFLDRKFGIKNLGQLKYILGIEVAR 319          
BLAST of mRNA_H-elongata_contig71815.14855.1 vs. uniprot
Match: A5BCC7_VITVI (Uncharacterized protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5BCC7_VITVI)

HSP 1 Score: 138 bits (347), Expect = 8.370e-34
Identity = 80/224 (35.71%), Postives = 124/224 (55.36%), Query Frame = 1
Query:    1 KRAIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTSAQASIRMVLSMIAALGWEARQVDVDMTYLEADVEKEIYAELPEAYRDSRK-QIGLL*KAMYGLVHAGLLW*KKFGIELEANGFQRSQADPCVFRRVLHGVVVXXXXXXXXXLLVASATKRDEEQAVRDLCSCFPIKDLGEASYYLGCHITR 669
            + A+A+E++       W+VV+ P  K  +G + ++K K + DG IE+YK RLVAQGF Q++GI Y+E  SP +   S+R  L++  A  WE  Q+DV+  +L  D+E+E+Y +LPE ++ + K ++  L K++YGL  A   W  K    L+  GFQ+S AD  +F     G +V         L++A    +  E     L   F IK+LG+  Y LG  + R
Sbjct:  820 REAMAKEIEALETNQTWKVVDLPPEKKAIGCKWIYKIKYNADGSIERYKARLVAQGFTQIEGIDYQEXFSPVAKMTSVRCFLAVXVAKRWELHQMDVNNAFLHGDLEEEVYMKLPEGFKATGKNKVCKLQKSLYGLKQASRQWFAKLTTALKEYGFQQSLADYSLFT-YRRGNIVMNLLVYVDDLILAGNDNKVCEAFKNFLDRKFGIKNLGQLKYILGIEVAR 1042          
BLAST of mRNA_H-elongata_contig71815.14855.1 vs. uniprot
Match: A0A392MGQ0_9FABA (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392MGQ0_9FABA)

HSP 1 Score: 135 bits (341), Expect = 9.030e-34
Identity = 74/224 (33.04%), Postives = 119/224 (53.12%), Query Frame = 1
Query:    1 KRAIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTSAQASIRMVLSMIAALGWEARQVDVDMTYLEADVEKEIYAELPEAYR-DSRKQIGLL*KAMYGLVHAGLLW*KKFGIELEANGFQRSQADPCVFRRVLHGVVVXXXXXXXXXLLVASATKRDEEQAVRDLCSCFPIKDLGEASYYLGCHITR 669
            + A+++E+        W++   PKGK  +G R V+K K    G +EKYK RLVA+G+ QV+G  + E+ +P +   ++R +L++  A GWE  Q+DV   +L  ++++E+Y E+P  Y+   ++ +  L K++YGL  A   W  K    L   GFQ  +AD  +F    HG            L+V     +  E+  + L  CF +KDLGE  Y+LG  + R
Sbjct:  204 REAMSQELKALEENKTWEMSRLPKGKKAVGCRWVYKVKYKSTGEVEKYKARLVAKGYTQVEGDDFNETFAPVAKMTTVRCLLTVAVAKGWELHQMDVSNAFLHGELDEEVYMEVPPGYKVPDKEMVCRLRKSLYGLRQASRNWYSKLSQALVKYGFQECEADHSLFT-YSHGSTFIVVLIYVDDLVVTGNDAKSCEKFKQYLSKCFHMKDLGELKYFLGLELAR 426          
BLAST of mRNA_H-elongata_contig71815.14855.1 vs. uniprot
Match: A0A438FKH2_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438FKH2_VITVI)

HSP 1 Score: 136 bits (343), Expect = 2.510e-33
Identity = 81/224 (36.16%), Postives = 124/224 (55.36%), Query Frame = 1
Query:    7 AIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTSAQASIRMVLSMIAALGWEARQVDVDMTYLEADVEKEIYAELPEAY--RDSRKQIGLL*KAMYGLVHAGLLW*KKFGIELEANGFQRSQADPCVFRRVLHGVVVXXXXXXXXXLLVASATKRDEEQAVRDLCSCFPIKDLGEASYYLGCHITRN 672
            A+  EM       VW +VE P G   +G + VFK K D  G IE+YK RLVA+GF Q +GI Y E+ SP S + S+R++L+++A    E +Q+DV  T+L  ++E+E+Y + PE +   D  + +  L K++YGL  A   W  KF   + + GF  +  D C++ +V  G  V         +L+A+  K    +  + L   F +KD+GEASY +G  I R+
Sbjct:  442 AMKDEMSSMKCNDVWDLVELPNGVKTIGCKWVFKTKKDSLGNIERYKARLVAKGFTQKEGIDYTETFSPVSKKDSLRIILALVAHFDLELQQMDVKTTFLNGELEEEVYMKQPEGFPSSDGEQLVCKLKKSIYGLKQASRQWYLKFHNIISSFGFVENVMDQCIYLKV-SGSKVCFLVLYVDDILLATNDKGLLHEVKQFLSKNFDMKDMGEASYVIGIKIHRD 664          
BLAST of mRNA_H-elongata_contig71815.14855.1 vs. uniprot
Match: A0A438E4T4_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=6 Tax=Vitis vinifera TaxID=29760 RepID=A0A438E4T4_VITVI)

HSP 1 Score: 136 bits (343), Expect = 2.780e-33
Identity = 79/225 (35.11%), Postives = 125/225 (55.56%), Query Frame = 1
Query:    1 KRAIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTSAQASIRMVLSMIAALGWEARQVDVDMTYLEADVEKEIYAELPEAYRDSRK-QIGLL*KAMYGLVHAGLLW*KKFGIELEANGFQRSQADPCVFRRVLHGVVVXXXXXXXXXLLVASATKRDEEQAVRDLCSCFPIKDLGEASYYLGCHITRN 672
            + A+A+E++       W+VV+ P  K  +G + ++K K + DG IE+YK RLVAQGF Q++GI Y+E  SP +   S+R  L+++ A  WE  Q+DV+  +L  D+E+E+Y +LPE ++ + K ++  L K++YGL  A   W  K    L+  GFQ+S AD  +F     G +V         L++A    +  E     L   F IK+L +  Y LG  + R+
Sbjct:  566 REAMAKEIEALETNQTWKVVDLPPEKKAIGCKWIYKIKYNADGSIERYKARLVAQGFTQIEGIDYQEMFSPVAKMTSVRWFLAVVVAKRWELHQMDVNNAFLHGDLEEEVYMKLPEGFKATGKNKVCKLQKSLYGLKQASRQWFAKLMTALKEYGFQQSLADYSLFT-YRRGNIVMNLLVYVDDLILAGNDNKVCEAFKNFLDRKFGIKNLRQLKYILGIEVARS 789          
BLAST of mRNA_H-elongata_contig71815.14855.1 vs. uniprot
Match: A0A438JNL3_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438JNL3_VITVI)

HSP 1 Score: 136 bits (343), Expect = 2.800e-33
Identity = 81/224 (36.16%), Postives = 124/224 (55.36%), Query Frame = 1
Query:    7 AIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPTSAQASIRMVLSMIAALGWEARQVDVDMTYLEADVEKEIYAELPEAY--RDSRKQIGLL*KAMYGLVHAGLLW*KKFGIELEANGFQRSQADPCVFRRVLHGVVVXXXXXXXXXLLVASATKRDEEQAVRDLCSCFPIKDLGEASYYLGCHITRN 672
            A+  EM       VW +VE P G   +G + VFK K D  G IE+YK RLVA+GF Q +GI Y E+ SP S + S+R++L+++A    E +Q+DV  T+L  ++E+E+Y + PE +   D  + +  L K++YGL  A   W  KF   + + GF  +  D C++ +V  G  V         +L+A+  K    +  + L   F +KD+GEASY +G  I R+
Sbjct:  614 AMKDEMSSMKCNDVWDLVELPNGVKTIGCKWVFKTKKDSLGNIERYKARLVAKGFTQKEGIDYTETFSPVSKKDSLRIILALVAHFDLELQQMDVKTTFLNGELEEEVYMKQPEGFPSSDGEQLVCKLKKSIYGLKQASRQWYLKFHNIISSFGFVENVMDQCIYLKV-SGSKVCFLVLYVDDILLATNDKGLLHEVKQFLSKNFDMKDMGEASYVIGIKIHRH 836          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig71815.14855.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A151RVY4_CAJCA2.540e-3736.32Retrovirus-related Pol polyprotein from transposon... [more]
A0A0C2WN23_AMAMK5.200e-3737.83Integrase catalytic domain-containing protein (Fra... [more]
A0A0C3AKI0_9AGAM3.860e-3535.24Uncharacterized protein (Fragment) n=1 Tax=Serendi... [more]
A0A182GIT5_AEDAL4.210e-3534.22Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A438GNV2_VITVI2.380e-3435.71Retrovirus-related Pol polyprotein from transposon... [more]
A5BCC7_VITVI8.370e-3435.71Uncharacterized protein n=1 Tax=Vitis vinifera Tax... [more]
A0A392MGQ0_9FABA9.030e-3433.04Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A438FKH2_VITVI2.510e-3336.16Retrovirus-related Pol polyprotein from transposon... [more]
A0A438E4T4_VITVI2.780e-3335.11Retrovirus-related Pol polyprotein from transposon... [more]
A0A438JNL3_VITVI2.800e-3336.16Retrovirus-related Pol polyprotein from transposon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig71815contigH-elongata_contig71815:73..744 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score104.4
Seed ortholog evalue3.9e-20
Seed eggNOG ortholog65672.G4TQV9
EggNOG free text desc.Encoded by
EggNOG OGs227R3@155619,38DPC@33154,3NUZ7@4751,3UY7N@5204,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelAgaricomycetes
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size672
Cds size366
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig71815.14855.1prot_H-elongata_contig71815.14855.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig71815 358..723 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931119.098233-UTR-H-elongata_contig71815:72..3571622931119.098233-UTR-H-elongata_contig71815:72..357Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig71815 73..357 -
1691679706.0340176-UTR-H-elongata_contig71815:72..3571691679706.0340176-UTR-H-elongata_contig71815:72..357Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig71815 73..357 -
1622931119.1280444-UTR-H-elongata_contig71815:723..7441622931119.1280444-UTR-H-elongata_contig71815:723..744Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig71815 724..744 -
1691679706.0527804-UTR-H-elongata_contig71815:723..7441691679706.0527804-UTR-H-elongata_contig71815:723..744Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig71815 724..744 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931119.1150541-CDS-H-elongata_contig71815:357..7231622931119.1150541-CDS-H-elongata_contig71815:357..723Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig71815 358..723 -
1691679706.0438433-CDS-H-elongata_contig71815:357..7231691679706.0438433-CDS-H-elongata_contig71815:357..723Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig71815 358..723 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig71815.14855.1

>prot_H-elongata_contig71815.14855.1 ID=prot_H-elongata_contig71815.14855.1|Name=mRNA_H-elongata_contig71815.14855.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=122bp
MDGQTARGVWQVVERPKGKTVLGTRVVFKRKIDKDGRIEKYKCRLVAQGF
RQVKGIHYEESSSPTSAQASIRMVLSMIAALGWEARQVDVDMTYLEADVE
KEIYAELPEAYRDSRKQIGLL*
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mRNA from alignment at H-elongata_contig71815:73..744-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig71815.14855.1 ID=mRNA_H-elongata_contig71815.14855.1|Name=mRNA_H-elongata_contig71815.14855.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=672bp|location=Sequence derived from alignment at H-elongata_contig71815:73..744- (Himanthalia elongata Himel1 dioecious)
AAAAGAGCGATCGCGCGCGAGATGGATGGGCAAACTGCTCGAGGCGTGTG GCAGGTGGTGGAGCGCCCGAAAGGGAAGACAGTGTTGGGCACGAGAGTAG TTTTCAAGCGCAAAATCGACAAGGATGGAAGGATCGAGAAGTATAAATGT CGTCTCGTGGCGCAGGGTTTCAGGCAGGTCAAAGGCATACACTACGAGGA ATCCTCCTCTCCGACTTCTGCGCAGGCCAGCATTAGGATGGTACTCAGCA TGATCGCGGCTCTCGGCTGGGAGGCGCGGCAGGTGGACGTCGACATGACC TACCTGGAGGCCGATGTGGAGAAGGAGATCTACGCTGAGCTCCCGGAGGC ATACCGTGACTCCAGAAAGCAAATCGGCCTACTATAGAAGGCAATGTACG GACTCGTCCACGCCGGGCTGCTGTGGTAAAAAAAGTTCGGGATCGAGCTC GAGGCGAATGGTTTCCAGAGATCTCAAGCCGACCCATGCGTGTTCCGGCG GGTTCTGCACGGGGTAGTGGTAGTCGTCATTGTGGTCTACGTCGACGACC TGCTGGTTGCTAGTGCGACGAAACGCGACGAGGAGCAAGCGGTGAGGGAC CTGTGCTCCTGTTTCCCCATCAAGGATCTGGGGGAAGCTTCGTATTACCT GGGATGCCACATAACGCGGAAC
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Coding sequence (CDS) from alignment at H-elongata_contig71815:73..744-

>mRNA_H-elongata_contig71815.14855.1 ID=mRNA_H-elongata_contig71815.14855.1|Name=mRNA_H-elongata_contig71815.14855.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=732bp|location=Sequence derived from alignment at H-elongata_contig71815:73..744- (Himanthalia elongata Himel1 dioecious)
ATGGATGGGCAAACTGCTCGAGGCGTGTGGCAGGTGGTGGAGCGCCCGAA
AGGGAAGACAGTGTTGGGCACGAGAGTAGTTTTCAAGCGCAAAATCGACA
AGGATGGAAGGATCGAGAAGTATAAATGTCGTCTCGTGGCGCAGGGTTTC
AGGCAGGTCAAAGGCATACACTACGAGGAATCCTCCTCTCCGACTTCTGC
GCAGGCCAGCATTAGGATGGTACTCAGCATGATCGCGGCTCTCGGCTGGG
AGGCGCGGCAGGTGGACGTCGACATGACCTACCTGGAGGCCGATGTGGAG
AAGGAGATCTACGCTGAGCTCCCGGAGGCATACCGTGACTCCAGAAAGCA
AATCGGCCTACTATAGATGGATGGGCAAACTGCTCGAGGCGTGTGGCAGG
TGGTGGAGCGCCCGAAAGGGAAGACAGTGTTGGGCACGAGAGTAGTTTTC
AAGCGCAAAATCGACAAGGATGGAAGGATCGAGAAGTATAAATGTCGTCT
CGTGGCGCAGGGTTTCAGGCAGGTCAAAGGCATACACTACGAGGAATCCT
CCTCTCCGACTTCTGCGCAGGCCAGCATTAGGATGGTACTCAGCATGATC
GCGGCTCTCGGCTGGGAGGCGCGGCAGGTGGACGTCGACATGACCTACCT
GGAGGCCGATGTGGAGAAGGAGATCTACGCTGAGCTCCCGGAGGCATACC
GTGACTCCAGAAAGCAAATCGGCCTACTATAG
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