prot_H-elongata_contig6504.14092.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig6504.14092.1 vs. uniprot
Match: A0A6H5L5H7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5H7_9PHAE) HSP 1 Score: 257 bits (657), Expect = 5.200e-75 Identity = 126/265 (47.55%), Postives = 177/265 (66.79%), Query Frame = 0
Query: 1 MDGADRSGVP-VRMQGGVKSHIPALMFADDLVALSRSRTGIERMARQVTYWTVENEMRVGIQKCELMVVNKPRSVLQQTPDQWQIAGEPVPVVSEYTNLRLRFTENLGVPTILSERVAEGKRLVDTLTPFLRTRVIPVPMKVAMVRGVVIPRLLFGAEVYGMNKAITESMEVLLNQVWRMVGGMNRNSTILTFAIWREMGTPPICAMAAARRARALQKCRKLRTWVRYLVEEPFKHKCKTWVTGMNTWMNTYAHRLAHLAIADAP 264
+DGA+ GVP V Q IP L+FADDLV +S +R + M ++ W ENEM GI KC +M + R L++ PD+W++AGE +P+V YT L L F L V ++ ++A G++LV +TP+L R IPVP+KVA+VRGV++PRLLFGAEV+GM +IT ++V +N+ +RMV GM+ +T+ + A+WRE+ PPICA AAARRAR +QK KL+TW+ ++ +P+KH+ TW TG WMN Y+HRLA D P
Sbjct: 729 LDGAESLGVPEVGNQLERAPRIPGLLFADDLVTISPTRAKLAAMDDHISVWMAENEMSAGIHKCGVMAIGHGRRRLRERPDRWKLAGETLPIVESYTYLGLEFNRRLDVEVMMGNKLAAGEKLVTLMTPYLLCRQIPVPLKVAVVRGVILPRLLFGAEVFGMRTSITNRLQVYVNRAYRMVAGMSPKATVSSVALWRELEIPPICASAAARRARTMQKASKLKTWIASIMAQPYKHRKWTWGTGTGRWMNRYSHRLAKATSDDLP 993
BLAST of mRNA_H-elongata_contig6504.14092.1 vs. uniprot
Match: A0A3M2C3P5_9GAMM (Reverse transcriptase domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M2C3P5_9GAMM) HSP 1 Score: 137 bits (346), Expect = 4.870e-33 Identity = 79/230 (34.35%), Postives = 126/230 (54.78%), Query Frame = 0
Query: 24 LMFADDLVALSRSRTGIERMARQVTYWTVENEMRVGIQKCELMVVNKPRSVLQQT-PDQWQIAGEPVPVVSEYTNLRLRFTENLGVPTILSERVAEGKRLVDTLTPFLRTRVIPVPMKVAMVRGVVIPRLLFGAEVYGMNKAITESMEVLL-NQVWRMVGGMNRNSTILTFAIWREMGTPPICAMAAARRARALQKCRKLRTWVRYLVEEPFKHKCKTWVTGMNTWMNTY 251
L+FADDLV LS +++ +T+W + EM+ G+ KC +M ++ P S L DQW + G+PVP+V EY L +L + + RV K+ + +++PFL R IP+ ++ + +V P L+GAE++G+ + T + L N + R+ G T + RE+ PP+ A+AAARR RA K L+TWV L + P + + KTW+TG W+ +
Sbjct: 948 LLFADDLVLLSDHPDKLQQSLDAITHWADKWEMQFGVSKCAIMGIDMPISHLSSLREDQWTLQGQPVPLVEEYVYLGTLLHNSLDMKESIRYRVGRAKKALQSVSPFLSCRSIPLHIRSRVFMSMVCPVALYGAELWGLREDRTRPIHSLFANAIQRIAG-------TYTGTLARELRIPPVAALAAARRTRAFFKFPSLKTWVSTLCQHPLRKRKKTWLTGCQYWLRRF 1170
BLAST of mRNA_H-elongata_contig6504.14092.1 vs. uniprot
Match: A0A7S3PFX4_9STRA (Hypothetical protein n=2 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PFX4_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 3.220e-20 Identity = 48/137 (35.04%), Postives = 84/137 (61.31%), Query Frame = 0
Query: 118 EGKRLVDTLTPFLRTRVIPVPMKVAMVRGVVIPRLLFGAEVYGMNKAITESMEVLLNQVWRMVGGMNRNSTILTFAIWREMGTPPICAMAAARRARALQKCRKLRTWVRYLVEEPFKHKCKTWVTGMNTWMNTYAHR 254
+G++ + PFL IP+ ++ ++ V++ RLL+GAE+YGMNK++T + LL++ +++ G++ + +W E G PPI A+AA+RRAR QK + LRT + L++ P++ TW++G W+ T R
Sbjct: 8 KGRQTQAAIRPFLGCLDIPLCIRRQILCSVMLSRLLYGAEIYGMNKSLTRHFQQLLDESLKIMLGVSPKMPVSKLVLWEEFGIPPIAALAASRRARVFQKAQNLRTKITTLIQSPYRSLQWTWISGTMRWLRTQIGR 144
BLAST of mRNA_H-elongata_contig6504.14092.1 vs. uniprot
Match: A0A1J5WUS4_9MICR (Reverse transcriptase domain-containing protein n=1 Tax=Amphiamblys sp. WSBS2006 TaxID=1866961 RepID=A0A1J5WUS4_9MICR) HSP 1 Score: 100 bits (248), Expect = 4.460e-20 Identity = 69/210 (32.86%), Postives = 107/210 (50.95%), Query Frame = 0
Query: 14 QGGVKSHIPALMFADDLVALSRSRTGIERMARQVTYWTVENEMRVGIQKCELMVVNKPRSVLQQTPDQWQIAGEPVPVVSEYTNLRLRFTENLGVPTILSERVAEGKRLVDTLTPFLRTRVIPVPMKVAMVRGVVIPRLLFGAEVYGMNKAITESMEVLLNQVWRMVGGMNRNSTILTFAIWREMGTPPICAMAAARRARALQKCRKLRT 223
+G ++ L FADDLV + +RT + + QV W EM + +KC ++ ++ I P+P V YT L + +NL ++ +R +G+ V L LR+ + + K +V+G+VIP +L+GAEVYG T M+ ++N+ +MV G N LT A+ R++G PI A AA R+ RA K LRT
Sbjct: 626 EGRIEEEGAGLAFADDLVVMGDNRTILRKAVIQVEMWARRWEMEINPKKCGVITFYGS----EEERVGIHIGEGPIPEVKSYTYLGVELDQNLTRKAVVEKRRKKGEECVFMLEKQLRSPSLTIGHKTLLVKGIVIPTMLYGAEVYGSTGEATRGMQTVVNKALKMVAG---NCCALT-AVRRDLGMMPIQAAAAGRQERAWAKFPNLRT 827
BLAST of mRNA_H-elongata_contig6504.14092.1 vs. uniprot
Match: A0A1J5WU32_9MICR (Reverse transcriptase domain-containing protein n=2 Tax=Amphiamblys sp. WSBS2006 TaxID=1866961 RepID=A0A1J5WU32_9MICR) HSP 1 Score: 96.7 bits (239), Expect = 5.640e-19 Identity = 66/210 (31.43%), Postives = 105/210 (50.00%), Query Frame = 0
Query: 14 QGGVKSHIPALMFADDLVALSRSRTGIERMARQVTYWTVENEMRVGIQKCELMVVNKPRSVLQQTPDQWQIAGEPVPVVSEYTNLRLRFTENLGVPTILSERVAEGKRLVDTLTPFLRTRVIPVPMKVAMVRGVVIPRLLFGAEVYGMNKAITESMEVLLNQVWRMVGGMNRNSTILTFAIWREMGTPPICAMAAARRARALQKCRKLRT 223
+G +++ L FADDLV L ++ + + Q+ W EM + +KC +MV + + G +P YT L + NL T+ R +G + L LR+ + + K +V+G+++P +L+GAEVYG T +V++N+ RMV G N LT A+WR++G P+ A AA+R+ RA K LRT
Sbjct: 196 EGAIENRGAGLAFADDLVVLGATKGILRKAVVQIELWAGRWEMEINPKKCGVMVFGGDQGEKVGVTTR----GGTIPEPDSYTYLGVELDRNLSRKTMSERRRKKGLECLFMLEKNLRSPSLSIGHKTLLVKGILMPTMLYGAEVYGSIGKTTSGAQVVVNKALRMVAG---NGGALT-AVWRDLGVIPVQAAAASRQRRAWLKFPTLRT 397
BLAST of mRNA_H-elongata_contig6504.14092.1 vs. uniprot
Match: L7JX89_TRAHO (RNA-directed DNA polymerase, Non LTR Retrotransposon (Fragment) n=1 Tax=Trachipleistophora hominis TaxID=72359 RepID=L7JX89_TRAHO) HSP 1 Score: 94.4 bits (233), Expect = 4.010e-18 Identity = 69/254 (27.17%), Postives = 121/254 (47.64%), Query Frame = 0
Query: 16 GVKSHIPALMFADDLVALSRSRTGIERMARQVTYWTVENEMRVGIQKCELMVVNKPRSVLQQTPDQWQIAGEPVPVVSEYTNLRLRFTENLGVPTILSERVAEGKRLVDTLTPFLRTRVIPVPMKVAMVRGVVIPRLLFGAEVYGMNKAITESMEVLLNQVWRMVGGMNRNSTILTFAIWREMGTPPICAMAAARRARALQKCRKLRTWVRYLVEEPFKHKCKTWVTGMNTWMNTYAHRLAHLAIADAPEGIKE 269
G +P L+FADD V + S + + W + +M + I KC LMV N +Q +++ A +P V Y L + NL + T++++R + ++ + + P + IP+P++V +++ V+IP FG+E+YGM+ T ++ ++++ R N LT + E+ I AA R RA K R RT + +++ FK TW TG W+ L + + EG+K+
Sbjct: 449 GNGEQVPGLLFADDAVVFAESYDDMVHNMEILEDWCDKWKMDLNISKCGLMVFNSN----EQRAIKYKNAN--IPTVERYRYLGIPINRNLDLKTVINDRKEKAQQALMIIRPLISRIEIPLPIRVTLIKSVLIPTATFGSELYGMSSQRTAPIQRVIDKAVRCAMACPANYCRLT--AYEEIRIECIDIRAAKARTRAFIKWRNSRTTISKVMKTDFKCPKTTWYTGTARWIRRL---LKNDTLNSTQEGVKK 691
BLAST of mRNA_H-elongata_contig6504.14092.1 vs. uniprot
Match: A0A1J5WVJ6_9MICR (Reverse transcriptase domain-containing protein n=1 Tax=Amphiamblys sp. WSBS2006 TaxID=1866961 RepID=A0A1J5WVJ6_9MICR) HSP 1 Score: 89.4 bits (220), Expect = 1.270e-16 Identity = 63/210 (30.00%), Postives = 104/210 (49.52%), Query Frame = 0
Query: 14 QGGVKSHIPALMFADDLVALSRSRTGIERMARQVTYWTVENEMRVGIQKCELMVVNKPRSVLQQTPDQWQIAGEPVPVVSEYTNLRLRFTENLGVPTILSERVAEGKRLVDTLTPFLRTRVIPVPMKVAMVRGVVIPRLLFGAEVYGMNKAITESMEVLLNQVWRMVGGMNRNSTILTFAIWREMGTPPICAMAAARRARALQKCRKLRT 223
+G +++ L FADDLV L ++ + + Q+ W EM + +KC +MV + + G +P YT L + NL T+ R +G + L LR+ + + K +V+G+++P +L+GAEVYG T +V++N+ RM+ G N LT A+ R++G P+ A AA+R+ RA K +RT
Sbjct: 196 EGAIENRGAGLAFADDLVVLGATKGILRKAVVQIELWAGRWEMEINPKKCGVMVFGDDQGEKVGVTTR----GGTIPEPDSYTYLGVELDRNLSRKTMSERRRKKGLECLFMLEKNLRSPSLSIGHKTLLVKGILMPTVLYGAEVYGSIGKTTSGAQVVVNKAVRMIAG---NGGALT-AVRRDLGVIPVQAAAASRQRRAWLKFPTVRT 397
BLAST of mRNA_H-elongata_contig6504.14092.1 vs. uniprot
Match: L7JUW7_TRAHO (Putative RNA-directed DNA polymerase (Reverse transcriptase), Non LTR Retrotransposon protein (Fragment) n=1 Tax=Trachipleistophora hominis TaxID=72359 RepID=L7JUW7_TRAHO) HSP 1 Score: 81.6 bits (200), Expect = 3.780e-14 Identity = 58/226 (25.66%), Postives = 114/226 (50.44%), Query Frame = 0
Query: 11 VRMQGGVKSHIPALMFADDLVALSRSRTGIERMARQVTYWTVENEMRVGIQKCELMVVN--KPRSVLQQTPDQWQIAGEPVPVVSEYTNLRLRFTENLGVPTILSERVAEGKRLVDTLTPFLRTRVIPVPMKVAMVRGVVIPRLLFGAEVYGMNKAITESMEVLLNQVWRMVGGMNRNSTILTFAIWREMGTPPICAMAAARRARALQKCRKLRTWVRYLVEEPFK 234
V +Q GV+S IP L+FADD V L+ S ++ ++++ W + + I+KC L+V + R++ + G+ +PVV+ YT L +L + ++ +R + R + PFL +P P+K+ +V+ V++P +G E+YGM+ + ++ +++ + + ++ +S+ + E+ + AA R A K + RT L+ + FK
Sbjct: 141 VAIQPGVRS-IPGLLFADDAVVLAESAHELQSNLQRISDWCERWRISLNIEKCGLVVFGPGEARNMCYR--------GQSLPVVASYTYLGHPLMPDLDLNVVIQDRKEKAIRAYHGMRPFLTRNFVPAPIKMLLVKSVLLPIATYGCELYGMSTSRLAHLQRVIDHALKDI--LSCSSSYCRNPAYEELRIDCVAMRAAKLRTHAFLKWKTSRTTFGELMNQTFK 355
BLAST of mRNA_H-elongata_contig6504.14092.1 vs. uniprot
Match: A0A1U7K4Z0_9APHY (Reverse transcriptase domain-containing protein n=2 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A1U7K4Z0_9APHY) HSP 1 Score: 79.7 bits (195), Expect = 4.060e-13 Identity = 63/224 (28.12%), Postives = 104/224 (46.43%), Query Frame = 0
Query: 25 MFADDLVALSRSRTGIERMARQVTYWTVENEMRVGIQKCELMV-VNKPRSVLQQTPDQWQIAGEPVPVVSEYTNLRLRFTENLGVPTILSE-------------RVAEGKRLVDTLTPFLRTRVIPVPMKVAMVRGVVIPRLLFGAEVYGMNKAITESMEVLLNQV--WRMVGGMNRNSTILTFAIWREMGTPPICAMAAARRARALQKC----RKLRTWVRYL 228
M+ADDL+ L R+ G ++ R++ W M +G+ KC +M + + Q+ I VP V Y L + F +LG + R AEG + V L P L R P+P+KV ++R +++P +L+G+E G + ++ +++ W M G NS F + ++G P + AARR R K +K+RTW++ L
Sbjct: 542 MYADDLLTLDRTVRGAQQTLRKIEKWARRWGMELGLPKCGVMGWITNDLDEEEFNSVQFLINAGTVPKVDRYKYLGVWFDPSLGDHRSGTSVFGGSLELHNSRFRAAEGLKAVHALRPLLLDRKCPLPIKVTLIRNLLLPLMLYGSEWTGFRQEHAAPIQRVVDMATRWAMGAGARSNS-YAGFTLSTDLGIPSVVEEMAARRTRLWVKLEAGEKKMRTWLQIL 764
BLAST of mRNA_H-elongata_contig6504.14092.1 vs. uniprot
Match: A0A1Y1S8L6_9MICR (LIN1 n=1 Tax=Enterospora canceri TaxID=1081671 RepID=A0A1Y1S8L6_9MICR) HSP 1 Score: 79.3 bits (194), Expect = 5.660e-13 Identity = 47/163 (28.83%), Postives = 81/163 (49.69%), Query Frame = 0
Query: 89 VPVVSEYTNLRLRFTENLGVPTILSERVAEGKRLVDTLTPFLRTRVIPVPMKVAMVRGVVIPRLLFGAEVYGMNKAITESMEVLLNQVWRMVGGMNRNSTILTFAIWREMGTPPICAMAAARRARALQKCRKLRTWVRYLVEEPFKHKCKTWVTGMNTWMNTY 251
VP+V YT L ++ T+ L + + +G + ++ L P L +P K+ ++ ++P LL+GAE++GMN ++ L RM + RN ++ + E GT + AA RR RA +K L+TW+ L++ P+ + + W T W Y
Sbjct: 1104 VPIVDHYTYLGVKITKTLTPMDMSHHNIGKGIKTIEGLKPILCGTRVPTYFKLKLIHARLMPVLLYGAELWGMNTNNCRKLQQTLVGALRMAMRVGRNVSV--GRLLAETGTALVAESAAKRRHRATRKFPTLKTWIAILLKNPYHGRKRVWSTNSQQWTKHY 1264 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6504.14092.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig6504.14092.1 ID=prot_H-elongata_contig6504.14092.1|Name=mRNA_H-elongata_contig6504.14092.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=270bpback to top |